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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0158100 |
| Transcript ID | LotjaGi3g1v0158100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoenolpyruvate carboxylase; TAIR: AT3G14940.1 phosphoenolpyruvate carboxylase 3; Swiss-Prot: sp|Q02735|CAPP_MEDSA Phosphoenolpyruvate carboxylase; TrEMBL-Plants: tr|Q8H946|Q8H946_LOTJA Phosphoenolpyruvate carboxylase; Found in the gene: LotjaGi3g1v0158100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21638362..21643798) extracted from Lotus japonicus Gifu genome v1.2.
GCAACAATGGCAAACAGGAATTTGGAAAAGATGGCATCCATTGATGCCCAGCTTAGGCAATTGGCTCCTGCAAAAGTCAG TGAGGATGATAAATTGATTGAGTATGATGCTCTGCTTCTGGATCGCTTCCTTGATATTCTCCAGGATTTACATGGAGAGG ATCTTAAGGAAACTGTGAGTTTTCTTTTTCTTTTTGTGTTTTTTTACTTGTTTGAGTAGTTTGTGTGCTCTCAGTATGTT TTGGTTACTCTCTGTTTGATTTTAAATGTCTCAATTATGATACTCACTTTGTTAAAGGTCCCATTGATACGAAAAAGCAT TGGACTTTACTTCTATTGACAGATTTTGGGTTTAGGATACTGGGTCAGGTGTACTGATTTGGAAGGTTTTAAGGAAACAA CATTTGATATATTTGGCTACATTTGTTTGTAGAGGGGGAATTCACTGGTTCAGTGAATAGTAGTTTTATTTCTTTTGGTT TGGAATATGTGTTTAATTAACTCAACTCTAAGGAATCAAAACATGGTCTGTTATGCCTTGGTGATTGGAGTTTCACCAAT AGGAGGTAAACATGTATGAAATGAAATAAAAGGAACAGTCAGTGGACTGGACATATAGTTAAATTTCATGTTAAGGTGAT TTTATAGATTGGTTTAATATACCAGATTTTATGTGTCCTTGCATGTCTCTTTGACATCATGATCTGGAAAATTGTTACAA TGTGATGGTTAAAATCTTAAATGTTTTTGTGCAGGTTCAAGAAGTGTATGAGCTTTCTGCTGAGTATGAAAGAAAGCATG ATCATGAGAAACTGGAAGAACTTGGAAAAGTGATAACCAGTTTGGATGCTGGGGACTCTATTGTGGTTGCTAAGTCGTTT TCCCACATGCTTAACTTGGCCAACTTAGCTGAAGAGGTCCAGATTTCTCGCCGCCGAAGGAACAAGCTGAAAAAAGGGGA TTTTGCTGATGAGAACAATGCAACTACTGAGTCAGATATTGAAGAAACTCTCAAGAAGCTTGTGTTTAAATTAAAGAAAT CTCCTCAGGAAGTTTTTGATGCCCTGAAGAACCAGACAGTAGACCTGGTTCTAACTGCTCATCCTACACAATCAGTTCGT AGATCTTTGCTTCAAAAGCATGCAAGGTTCATTTCAAAATATAGCATTTTTCAGCTCTATTTTGCTTTTGTATTTTTTCT AAAGGATATTGCTTTAAAAAGTTGATTATTATTTTTTTCACAGGATACGGAATTCCTTATCTCAATTGTATGCTAAAGAT ATCACTCCTGATGATAAGCAAGAGCTTGATGAAGCTCTACAAAGGGAGGTGAGTATCAAAGCCTTTTGGATTTTGTATGA TGTCTTGCAAAACTGCAATAATTTACCATTTATTTTTTGTTGTAAGTGTTTTTTCCTCGTTTTCAGTTCTTATCGGATTA AAAATCAAAGTATTGTCTCTAATGCTGAGAAAAGATATAGACTTCTAAGGAATTCTAAATCTCCCTAGACCTTTGTATAG TTATCACATTACAACTCCTCTCCTTTTTGTTGGCTGCAATTGAAGCATGTCACGTATGCAATCCTGATAAAAAGAGAAAT GTGTTCATTAACTCCTCCATGTGGTTAAAAATGTCTCACCTACCTTACAAGATTTTTTTTTTATCTAAATCTTTTCTATG ACTTTGTATGACAACAATGCCTTTGTTTGGGGTTGATTCTTGCCAGAAATATAATATAAAATCATTCATGTGTTTTACCT AACAACAGCTTAAGCTTTTGGAATAGTTTGGTTCATCACAATTCTGATGAAGAAGAAAATAGGTAATGATAACAAGATTA CTTACATATTTATGTAGATTCAAGCTGCCTTCCGTACAGATGAAATCAAGAGGACCCCTCCGACACCACAGGATGAGATG AGGGCAGGGATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTCCCTAAATTTCTGCGTCGCGTTGACACAGCTTTGAA GAATATAGGGATCAACGAACGTGTTCCTTATAATGCTCCTCTTATCCAGTTTTCTTCTTGGATGGGCGGTGATCGTGATG GTATCACTCTAATCTGTGACAAAAAAAAATTGCATTATAAGGCTGTTCTGGTCTGTTAATGAAAATTGAACTTGAAGCTA GCTTAAGGTCATATATATGTATCTAATCTGTGTTCAATATGTATGATACAGGTAATCCAAGAGTGACTCCGGAAGTGACT AGGGATGTTTGCTTGTTAGCTAGAATGATGGCATCTAATTTGTACTATTCACAGATAGAAGATCTTATGTTTGAAGTAAT TCATAGCTCTTCTTCTTGCTGCCTTTGGAAATGACCATTGTGGATAGATAGTTTATTAATCAAATTTCCCTTATTGCTTC TATAGCTGTCTATGTGGCGCTGCAACGATGAGTTACGTGTCCATGCAGATGAACTTCACAGGAATTCCAACAAAGATGAA GTTGCAAAACACTATATAGGTGTTTACCACACTCTTCCTTATTTTCTCTAGTGAAAATCTATGAACAATGAAATCTACTC AAGATGACCTCACAATGGAACAAACTGTTGTCTACTTAATACAAGTTATGTAAATTAGGAAACTGTGTTGGTTAATTCAC TGCTGCGATAATCTTGTCTTTTGTCCATGGTGCAGAATTTTGGAAGAAGGTTCCCCCAAATGAGCCATACCGTGTAGTAC TCGGTGAAGTAAGGGACAGGCTCTATAAGACTCGTGAGCATTCTCGCTATTTACTAGCTCAAGGGTATTCTGACATTCCA GAGGAAGCCACTTTCACCAATGTTGAGGAGGTATACATTTCTATGTCCATTGTTTTTGGCTTTCTTGTCTACAACACAAT CCAGCTTCTAACTTTAGCACTCCATAAATCATCAATGTACATTATTTCCTCTACTGTATGTCAATGCAACTTGTGAAATT CTCTCAAGGTCTCCTAAGCTATAAAAGTAGTTTTATTTCCACAGACTTTTGTTAGGAATTTCAGATAAGGTTCTCTGCAA CTCCCTCATGCACAATTATACAAAAATCAATGGCTATGTTTTTAATCCAAATGAAAAATACCTTATTAAATAAAAGAGTT TAGGATGATTTATTGGCTGCTGAGACTGTAGAGGATGCAGAGAATTAGTTTTACATGTGTATTTTGATTTAGCTTTTGGT TGATTCCTTGCCTTGGATATGAGGATATCTTTATTTGACAGATACTAACTGAAGTTAATTTTTCCAGTTCCTAGAACCTC TTGAACTCTGCTACAGATCACTCTGTGATTGTGGTGATCGCGCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAA GTCTCCACTTTTGGACTGTCACTAGTAAGGCTTGATATCAGGCAAGAGTCGGACCGTCACACAGATGTGATGGATGCCAT TACAAAACACTTGGAGATTGGCTCCTACCAGGAATGGTCGGAAGAAAAGCGACAGGAATGGCTGTTGGGTGAGTTGAGCG GCAAACGGCCACTGTTCGGACCTGACCTCCCCCAAACTGAGGAAATCAGAGATGTTCTGGACACATTTCATGTCATTGCC GAACTTCCATCGGACAACTTTGGAGCCTATATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTCGAGCTTCT CCAACGCGAAAGCCACATCAAGAATCCATTAAGAGTTGTCCCATTGTTTGAGAAACTTGATGATCTTGAGGCTGCTCCTG CTGCATTGGCTCGGTTGTTCTCAATAGAATGGTATAGGAACAGGATCAATGGGAAGCAAGAAGTCATGATTGGATATTCA GATTCTGGAAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTGTATAAGGCTCAGGAGGATCTTATAAAGGTTGCCAA GAAATTCGGTGTTAAGTTAACCATGTTCCACGGTCGCGGAGGAACCGTTGGAAGAGGAGGTGGACCTACTCATCTTGCTA TCCTTTCTCAACCTCCTGACACAATCCACGGATCGCTGCGTGTGACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGA GAGGAGCACTTGTGCTTTAGAACACTGCAGCGTTTCACTGCTGCTACTCTAGAACATGGAATGAATCCCCCATTTTCCCC AAAACCAGAATGGCGTGCTTTGATGGATCAGTTAGCTGTCATTGCTACTGAGGAATACCGTTCAATTGTTTTCCAGGAAC CGCGCTTCGTTGAGTATTTCCGCCTGGTAAGACATCACAAAAATCATCAACGCAACTTCGAGTCCGTTTGTTTTACCATT AGAAAGTATGAAAATGAGAGAATAATATATCGCGAGACACTTTTTGTTGAAGTAGTAAGTTGTTACTCCAACAGAAAGTC CACCAGTATGTGTAATTTTCCCATTTTCATATTTTCTAATGGTAAACCAATGAACTCTTCATTGTTATGTGAAATGATAT TTAAATTGTAACAATCACTGTGAACTTTCTTTTGTAGGCTACACCAGAGTTGGAGTATGGCCGGATGAATATAGGAAGCC GGCCGGCGAAGAGAAGACCTACTGGAGGCATTGAAACGCTTCGCGCAATCCCTTGGATCTTTGCATGGACACAGACAAGG TTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCTGCATTTAGACAACTTATTGAGAAGGATGTTAGGAATCTCCATACGCT TCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACAATTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCCG GAATCGCTGCTCTAAATGACAGGCTCCTAGTTTCAGAGGACTTGTGGCCATTTGGGGAACAGTTGAGGAACAAATATGAA GAAACTAAGAAACTCCTGCTTCAGGTACTTTTCTTTTACCTTGTAAACCCAAAATCTATCCCAGCAGTGAGGGCTGTTTT ATTGTTTATGAGGACTATTTTGACCATATTTCTAGCCAATGTGAGACTTTTCAAAGTATATATTAGTCATTTTAGTTTCC TTTTGCCATTCAAATTTTTGGCACTTCATTCTTTGCTAAATAATGAACTTTCAAGGCTTAAGAACTTGACTGATTAGTTA TTCCCCAAGCTGATTTTTGTTTCCTGCTGTTCTGGAAGGTGGCTGGGCACAAGGAAGTTCTTGAAGGAGACCCTTACTTG AAGCAAAGACTCCGGCTGCGTGATTCGTACATCACCACCATGAATGTTTTCCAAGCTTATACATTGAAACGTATCCGTGA TCCAAACTATGATGTGAAGCACATTTCTAAAGAGAAAAGCAAACCAGCTGATGAACTTGTGAGACTGAACCCAACAAGTG AATATGCCCCTGGTTTGGAAGACACCCTGATTCTCACCATGAAGGGAATTGCTGCTGGAATGCAGAACACCGGTTAA
CDS sequence (LotjaGi3g1v0158100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACAGGAATTTGGAAAAGATGGCATCCATTGATGCCCAGCTTAGGCAATTGGCTCCTGCAAAAGTCAGTGAGGA TGATAAATTGATTGAGTATGATGCTCTGCTTCTGGATCGCTTCCTTGATATTCTCCAGGATTTACATGGAGAGGATCTTA AGGAAACTGTTCAAGAAGTGTATGAGCTTTCTGCTGAGTATGAAAGAAAGCATGATCATGAGAAACTGGAAGAACTTGGA AAAGTGATAACCAGTTTGGATGCTGGGGACTCTATTGTGGTTGCTAAGTCGTTTTCCCACATGCTTAACTTGGCCAACTT AGCTGAAGAGGTCCAGATTTCTCGCCGCCGAAGGAACAAGCTGAAAAAAGGGGATTTTGCTGATGAGAACAATGCAACTA CTGAGTCAGATATTGAAGAAACTCTCAAGAAGCTTGTGTTTAAATTAAAGAAATCTCCTCAGGAAGTTTTTGATGCCCTG AAGAACCAGACAGTAGACCTGGTTCTAACTGCTCATCCTACACAATCAGTTCGTAGATCTTTGCTTCAAAAGCATGCAAG GATACGGAATTCCTTATCTCAATTGTATGCTAAAGATATCACTCCTGATGATAAGCAAGAGCTTGATGAAGCTCTACAAA GGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAAGAGGACCCCTCCGACACCACAGGATGAGATGAGGGCAGGGATG AGCTACTTCCATGAAACAATTTGGAAGGGTGTCCCTAAATTTCTGCGTCGCGTTGACACAGCTTTGAAGAATATAGGGAT CAACGAACGTGTTCCTTATAATGCTCCTCTTATCCAGTTTTCTTCTTGGATGGGCGGTGATCGTGATGGTAATCCAAGAG TGACTCCGGAAGTGACTAGGGATGTTTGCTTGTTAGCTAGAATGATGGCATCTAATTTGTACTATTCACAGATAGAAGAT CTTATGTTTGAACTGTCTATGTGGCGCTGCAACGATGAGTTACGTGTCCATGCAGATGAACTTCACAGGAATTCCAACAA AGATGAAGTTGCAAAACACTATATAGAATTTTGGAAGAAGGTTCCCCCAAATGAGCCATACCGTGTAGTACTCGGTGAAG TAAGGGACAGGCTCTATAAGACTCGTGAGCATTCTCGCTATTTACTAGCTCAAGGGTATTCTGACATTCCAGAGGAAGCC ACTTTCACCAATGTTGAGGAGTTCCTAGAACCTCTTGAACTCTGCTACAGATCACTCTGTGATTGTGGTGATCGCGCAAT TGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTCTCCACTTTTGGACTGTCACTAGTAAGGCTTGATATCAGGCAAG AGTCGGACCGTCACACAGATGTGATGGATGCCATTACAAAACACTTGGAGATTGGCTCCTACCAGGAATGGTCGGAAGAA AAGCGACAGGAATGGCTGTTGGGTGAGTTGAGCGGCAAACGGCCACTGTTCGGACCTGACCTCCCCCAAACTGAGGAAAT CAGAGATGTTCTGGACACATTTCATGTCATTGCCGAACTTCCATCGGACAACTTTGGAGCCTATATCATATCAATGGCAA CTGCACCATCTGATGTGCTTGCAGTCGAGCTTCTCCAACGCGAAAGCCACATCAAGAATCCATTAAGAGTTGTCCCATTG TTTGAGAAACTTGATGATCTTGAGGCTGCTCCTGCTGCATTGGCTCGGTTGTTCTCAATAGAATGGTATAGGAACAGGAT CAATGGGAAGCAAGAAGTCATGATTGGATATTCAGATTCTGGAAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTGT ATAAGGCTCAGGAGGATCTTATAAAGGTTGCCAAGAAATTCGGTGTTAAGTTAACCATGTTCCACGGTCGCGGAGGAACC GTTGGAAGAGGAGGTGGACCTACTCATCTTGCTATCCTTTCTCAACCTCCTGACACAATCCACGGATCGCTGCGTGTGAC AGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAGCACTTGTGCTTTAGAACACTGCAGCGTTTCACTGCTGCTA CTCTAGAACATGGAATGAATCCCCCATTTTCCCCAAAACCAGAATGGCGTGCTTTGATGGATCAGTTAGCTGTCATTGCT ACTGAGGAATACCGTTCAATTGTTTTCCAGGAACCGCGCTTCGTTGAGTATTTCCGCCTGGCTACACCAGAGTTGGAGTA TGGCCGGATGAATATAGGAAGCCGGCCGGCGAAGAGAAGACCTACTGGAGGCATTGAAACGCTTCGCGCAATCCCTTGGA TCTTTGCATGGACACAGACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCTGCATTTAGACAACTTATTGAGAAG GATGTTAGGAATCTCCATACGCTTCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACAATTGATTTAGTGGAAAT GGTGTTTGCCAAGGGAGACCCCGGAATCGCTGCTCTAAATGACAGGCTCCTAGTTTCAGAGGACTTGTGGCCATTTGGGG AACAGTTGAGGAACAAATATGAAGAAACTAAGAAACTCCTGCTTCAGGTGGCTGGGCACAAGGAAGTTCTTGAAGGAGAC CCTTACTTGAAGCAAAGACTCCGGCTGCGTGATTCGTACATCACCACCATGAATGTTTTCCAAGCTTATACATTGAAACG TATCCGTGATCCAAACTATGATGTGAAGCACATTTCTAAAGAGAAAAGCAAACCAGCTGATGAACTTGTGAGACTGAACC CAACAAGTGAATATGCCCCTGGTTTGGAAGACACCCTGATTCTCACCATGAAGGGAATTGCTGCTGGAATGCAGAACACC GGTTAA
Protein sequence (LotjaGi3g1v0158100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYERKHDHEKLEELG KVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNKLKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDAL KNQTVDLVLTAHPTQSVRRSLLQKHARIRNSLSQLYAKDITPDDKQELDEALQREIQAAFRTDEIKRTPPTPQDEMRAGM SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMASNLYYSQIED LMFELSMWRCNDELRVHADELHRNSNKDEVAKHYIEFWKKVPPNEPYRVVLGEVRDRLYKTREHSRYLLAQGYSDIPEEA TFTNVEEFLEPLELCYRSLCDCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEE KRQEWLLGELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPSDNFGAYIISMATAPSDVLAVELLQRESHIKNPLRVVPL FEKLDDLEAAPAALARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAKKFGVKLTMFHGRGGT VGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMNPPFSPKPEWRALMDQLAVIA TEEYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRRPTGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFRQLIEK DVRNLHTLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSEDLWPFGEQLRNKYEETKKLLLQVAGHKEVLEGD PYLKQRLRLRDSYITTMNVFQAYTLKRIRDPNYDVKHISKEKSKPADELVRLNPTSEYAPGLEDTLILTMKGIAAGMQNT G
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 961 | 959 | 0.0 | – | |
| PANTHER | 3 | 961 | 959 | 0.0 | ||
| Hamap | 23 | 961 | 939 | 16.716 | ||
| SUPERFAMILY | 33 | 961 | 929 | 0.0 | ||
| Coils | 104 | 124 | 21 | - | – | |
| Pfam | 163 | 961 | 799 | 7.5E-298 | ||
| PRINTS | 167 | 180 | 14 | 7.9E-83 | ||
| ProSitePatterns | 168 | 179 | 12 | - | ||
| PRINTS | 220 | 236 | 17 | 7.9E-83 | ||
| PRINTS | 280 | 295 | 16 | 7.9E-83 | ||
| Gene3D | 308 | 445 | 138 | 2.8E-56 | – | |
| PRINTS | 442 | 462 | 21 | 7.9E-83 | ||
| PRINTS | 591 | 611 | 21 | 7.9E-83 | ||
| ProSitePatterns | 593 | 605 | 13 | - | ||
| PRINTS | 633 | 662 | 30 | 7.9E-83 | ||
| PRINTS | 765 | 791 | 27 | 7.9E-83 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Phosphoenolpyruvate carboxylase activity | Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-. | ||
| Biological process | Carbon fixation | A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates). |
Expression pattern of LotjaGi3g1v0158100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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