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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0158100 |
| Transcript ID | LotjaGi3g1v0158100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoenolpyruvate carboxylase; TAIR: AT3G14940.1 phosphoenolpyruvate carboxylase 3; Swiss-Prot: sp|P51061|CAPP2_SOYBN Phosphoenolpyruvate carboxylase; TrEMBL-Plants: tr|Q8H946|Q8H946_LOTJA Phosphoenolpyruvate carboxylase; Found in the gene: LotjaGi3g1v0158100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21638368..21643798) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAAACAGGAATTTGGAAAAGATGGCATCCATTGATGCCCAGCTTAGGCAATTGGCTCCTGCAAAAGTCAGTGAGGA TGATAAATTGATTGAGTATGATGCTCTGCTTCTGGATCGCTTCCTTGATATTCTCCAGGATTTACATGGAGAGGATCTTA AGGAAACTGTGAGTTTTCTTTTTCTTTTTGTGTTTTTTTACTTGTTTGAGTAGTTTGTGTGCTCTCAGTATGTTTTGGTT ACTCTCTGTTTGATTTTAAATGTCTCAATTATGATACTCACTTTGTTAAAGGTCCCATTGATACGAAAAAGCATTGGACT TTACTTCTATTGACAGATTTTGGGTTTAGGATACTGGGTCAGGTGTACTGATTTGGAAGGTTTTAAGGAAACAACATTTG ATATATTTGGCTACATTTGTTTGTAGAGGGGGAATTCACTGGTTCAGTGAATAGTAGTTTTATTTCTTTTGGTTTGGAAT ATGTGTTTAATTAACTCAACTCTAAGGAATCAAAACATGGTCTGTTATGCCTTGGTGATTGGAGTTTCACCAATAGGAGG TAAACATGTATGAAATGAAATAAAAGGAACAGTCAGTGGACTGGACATATAGTTAAATTTCATGTTAAGGTGATTTTATA GATTGGTTTAATATACCAGATTTTATGTGTCCTTGCATGTCTCTTTGACATCATGATCTGGAAAATTGTTACAATGTGAT GGTTAAAATCTTAAATGTTTTTGTGCAGGTTCAAGAAGTGTATGAGCTTTCTGCTGAGTATGAAAGAAAGCATGATCATG AGAAACTGGAAGAACTTGGAAAAGTGATAACCAGTTTGGATGCTGGGGACTCTATTGTGGTTGCTAAGTCGTTTTCCCAC ATGCTTAACTTGGCCAACTTAGCTGAAGAGGTCCAGATTTCTCGCCGCCGAAGGAACAAGCTGAAAAAAGGGGATTTTGC TGATGAGAACAATGCAACTACTGAGTCAGATATTGAAGAAACTCTCAAGAAGCTTGTGTTTAAATTAAAGAAATCTCCTC AGGAAGTTTTTGATGCCCTGAAGAACCAGACAGTAGACCTGGTTCTAACTGCTCATCCTACACAATCAGTTCGTAGATCT TTGCTTCAAAAGCATGCAAGGTTCATTTCAAAATATAGCATTTTTCAGCTCTATTTTGCTTTTGTATTTTTTCTAAAGGA TATTGCTTTAAAAAGTTGATTATTATTTTTTTCACAGGATACGGAATTCCTTATCTCAATTGTATGCTAAAGATATCACT CCTGATGATAAGCAAGAGCTTGATGAAGCTCTACAAAGGGAGGTGAGTATCAAAGCCTTTTGGATTTTGTATGATGTCTT GCAAAACTGCAATAATTTACCATTTATTTTTTGTTGTAAGTGTTTTTTCCTCGTTTTCAGTTCTTATCGGATTAAAAATC AAAGTATTGTCTCTAATGCTGAGAAAAGATATAGACTTCTAAGGAATTCTAAATCTCCCTAGACCTTTGTATAGTTATCA CATTACAACTCCTCTCCTTTTTGTTGGCTGCAATTGAAGCATGTCACGTATGCAATCCTGATAAAAAGAGAAATGTGTTC ATTAACTCCTCCATGTGGTTAAAAATGTCTCACCTACCTTACAAGATTTTTTTTTTATCTAAATCTTTTCTATGACTTTG TATGACAACAATGCCTTTGTTTGGGGTTGATTCTTGCCAGAAATATAATATAAAATCATTCATGTGTTTTACCTAACAAC AGCTTAAGCTTTTGGAATAGTTTGGTTCATCACAATTCTGATGAAGAAGAAAATAGGTAATGATAACAAGATTACTTACA TATTTATGTAGATTCAAGCTGCCTTCCGTACAGATGAAATCAAGAGGACCCCTCCGACACCACAGGATGAGATGAGGGCA GGGATGAGCTACTTCCATGAAACAATTTGGAAGGGTGTCCCTAAATTTCTGCGTCGCGTTGACACAGCTTTGAAGAATAT AGGGATCAACGAACGTGTTCCTTATAATGCTCCTCTTATCCAGTTTTCTTCTTGGATGGGCGGTGATCGTGATGGTATCA CTCTAATCTGTGACAAAAAAAAATTGCATTATAAGGCTGTTCTGGTCTGTTAATGAAAATTGAACTTGAAGCTAGCTTAA GGTCATATATATGTATCTAATCTGTGTTCAATATGTATGATACAGGTAATCCAAGAGTGACTCCGGAAGTGACTAGGGAT GTTTGCTTGTTAGCTAGAATGATGGCATCTAATTTGTACTATTCACAGATAGAAGATCTTATGTTTGAAGTAATTCATAG CTCTTCTTCTTGCTGCCTTTGGAAATGACCATTGTGGATAGATAGTTTATTAATCAAATTTCCCTTATTGCTTCTATAGC TGTCTATGTGGCGCTGCAACGATGAGTTACGTGTCCATGCAGATGAACTTCACAGGAATTCCAACAAAGATGAAGTTGCA AAACACTATATAGGTGTTTACCACACTCTTCCTTATTTTCTCTAGTGAAAATCTATGAACAATGAAATCTACTCAAGATG ACCTCACAATGGAACAAACTGTTGTCTACTTAATACAAGTTATGTAAATTAGGAAACTGTGTTGGTTAATTCACTGCTGC GATAATCTTGTCTTTTGTCCATGGTGCAGAATTTTGGAAGAAGGTTCCCCCAAATGAGCCATACCGTGTAGTACTCGGTG AAGTAAGGGACAGGCTCTATAAGACTCGTGAGCATTCTCGCTATTTACTAGCTCAAGGGTATTCTGACATTCCAGAGGAA GCCACTTTCACCAATGTTGAGGAGGTATACATTTCTATGTCCATTGTTTTTGGCTTTCTTGTCTACAACACAATCCAGCT TCTAACTTTAGCACTCCATAAATCATCAATGTACATTATTTCCTCTACTGTATGTCAATGCAACTTGTGAAATTCTCTCA AGGTCTCCTAAGCTATAAAAGTAGTTTTATTTCCACAGACTTTTGTTAGGAATTTCAGATAAGGTTCTCTGCAACTCCCT CATGCACAATTATACAAAAATCAATGGCTATGTTTTTAATCCAAATGAAAAATACCTTATTAAATAAAAGAGTTTAGGAT GATTTATTGGCTGCTGAGACTGTAGAGGATGCAGAGAATTAGTTTTACATGTGTATTTTGATTTAGCTTTTGGTTGATTC CTTGCCTTGGATATGAGGATATCTTTATTTGACAGATACTAACTGAAGTTAATTTTTCCAGTTCCTAGAACCTCTTGAAC TCTGCTACAGATCACTCTGTGATTGTGGTGATCGCGCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTCTCC ACTTTTGGACTGTCACTAGTAAGGCTTGATATCAGGCAAGAGTCGGACCGTCACACAGATGTGATGGATGCCATTACAAA ACACTTGGAGATTGGCTCCTACCAGGAATGGTCGGAAGAAAAGCGACAGGAATGGCTGTTGGGTGAGTTGAGCGGCAAAC GGCCACTGTTCGGACCTGACCTCCCCCAAACTGAGGAAATCAGAGATGTTCTGGACACATTTCATGTCATTGCCGAACTT CCATCGGACAACTTTGGAGCCTATATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTCGAGCTTCTCCAACG CGAAAGCCACATCAAGAATCCATTAAGAGTTGTCCCATTGTTTGAGAAACTTGATGATCTTGAGGCTGCTCCTGCTGCAT TGGCTCGGTTGTTCTCAATAGAATGGTATAGGAACAGGATCAATGGGAAGCAAGAAGTCATGATTGGATATTCAGATTCT GGAAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTGTATAAGGCTCAGGAGGATCTTATAAAGGTTGCCAAGAAATT CGGTGTTAAGTTAACCATGTTCCACGGTCGCGGAGGAACCGTTGGAAGAGGAGGTGGACCTACTCATCTTGCTATCCTTT CTCAACCTCCTGACACAATCCACGGATCGCTGCGTGTGACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAG CACTTGTGCTTTAGAACACTGCAGCGTTTCACTGCTGCTACTCTAGAACATGGAATGAATCCCCCATTTTCCCCAAAACC AGAATGGCGTGCTTTGATGGATCAGTTAGCTGTCATTGCTACTGAGGAATACCGTTCAATTGTTTTCCAGGAACCGCGCT TCGTTGAGTATTTCCGCCTGGTAAGACATCACAAAAATCATCAACGCAACTTCGAGTCCGTTTGTTTTACCATTAGAAAG TATGAAAATGAGAGAATAATATATCGCGAGACACTTTTTGTTGAAGTAGTAAGTTGTTACTCCAACAGAAAGTCCACCAG TATGTGTAATTTTCCCATTTTCATATTTTCTAATGGTAAACCAATGAACTCTTCATTGTTATGTGAAATGATATTTAAAT TGTAACAATCACTGTGAACTTTCTTTTGTAGGCTACACCAGAGTTGGAGTATGGCCGGATGAATATAGGAAGCCGGCCGG CGAAGAGAAGACCTACTGGAGGCATTGAAACGCTTCGCGCAATCCCTTGGATCTTTGCATGGACACAGACAAGGTTTCAT CTTCCAGTGTGGCTAGGCTTTGGAGCTGCATTTAGACAACTTATTGAGAAGGATGTTAGGAATCTCCATACGCTTCAAGA GATGTACAATCAATGGCCTTTCTTTAGGGTCACAATTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCCGGAATCG CTGCTCTAAATGACAGGCTCCTAGTTTCAGAGGACTTGTGGCCATTTGGGGAACAGTTGAGGAACAAATATGAAGAAACT AAGAAACTCCTGCTTCAGGTACTTTTCTTTTACCTTGTAAACCCAAAATCTATCCCAGCAGTGAGGGCTGTTTTATTGTT TATGAGGACTATTTTGACCATATTTCTAGCCAATGTGAGACTTTTCAAAGTATATATTAGTCATTTTAGTTTCCTTTTGC CATTCAAATTTTTGGCACTTCATTCTTTGCTAAATAATGAACTTTCAAGGCTTAAGAACTTGACTGATTAGTTATTCCCC AAGCTGATTTTTGTTTCCTGCTGTTCTGGAAGGTGGCTGGGCACAAGGAAGTTCTTGAAGGAGACCCTTACTTGAAGCAA AGACTCCGGCTGCGTGATTCGTACATCACCACCATGAATGTTTTCCAAGCTTATACATTGAAACGTATCCGTGATCCAAA CTATGATGTGAAGCACATTTCTAAAGAGAAAAGCAAACCAGCTGATGAACTTGTGAGACTGAACCCAACAAGTGAATATG CCCCTGGTTTGGAAGACACCCTGATTCTCACCATGAAGGGAATTGCTGCTGGAATGCAGAACACCGGTTAA
CDS sequence (LotjaGi3g1v0158100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACAGGAATTTGGAAAAGATGGCATCCATTGATGCCCAGCTTAGGCAATTGGCTCCTGCAAAAGTCAGTGAGGA TGATAAATTGATTGAGTATGATGCTCTGCTTCTGGATCGCTTCCTTGATATTCTCCAGGATTTACATGGAGAGGATCTTA AGGAAACTGTTCAAGAAGTGTATGAGCTTTCTGCTGAGTATGAAAGAAAGCATGATCATGAGAAACTGGAAGAACTTGGA AAAGTGATAACCAGTTTGGATGCTGGGGACTCTATTGTGGTTGCTAAGTCGTTTTCCCACATGCTTAACTTGGCCAACTT AGCTGAAGAGGTCCAGATTTCTCGCCGCCGAAGGAACAAGCTGAAAAAAGGGGATTTTGCTGATGAGAACAATGCAACTA CTGAGTCAGATATTGAAGAAACTCTCAAGAAGCTTGTGTTTAAATTAAAGAAATCTCCTCAGGAAGTTTTTGATGCCCTG AAGAACCAGACAGTAGACCTGGTTCTAACTGCTCATCCTACACAATCAGTTCGTAGATCTTTGCTTCAAAAGCATGCAAG GATACGGAATTCCTTATCTCAATTGTATGCTAAAGATATCACTCCTGATGATAAGCAAGAGCTTGATGAAGCTCTACAAA GGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAAGAGGACCCCTCCGACACCACAGGATGAGATGAGGGCAGGGATG AGCTACTTCCATGAAACAATTTGGAAGGGTGTCCCTAAATTTCTGCGTCGCGTTGACACAGCTTTGAAGAATATAGGGAT CAACGAACGTGTTCCTTATAATGCTCCTCTTATCCAGTTTTCTTCTTGGATGGGCGGTGATCGTGATGGTAATCCAAGAG TGACTCCGGAAGTGACTAGGGATGTTTGCTTGTTAGCTAGAATGATGGCATCTAATTTGTACTATTCACAGATAGAAGAT CTTATGTTTGAACTGTCTATGTGGCGCTGCAACGATGAGTTACGTGTCCATGCAGATGAACTTCACAGGAATTCCAACAA AGATGAAGTTGCAAAACACTATATAGAATTTTGGAAGAAGGTTCCCCCAAATGAGCCATACCGTGTAGTACTCGGTGAAG TAAGGGACAGGCTCTATAAGACTCGTGAGCATTCTCGCTATTTACTAGCTCAAGGGTATTCTGACATTCCAGAGGAAGCC ACTTTCACCAATGTTGAGGAGTTCCTAGAACCTCTTGAACTCTGCTACAGATCACTCTGTGATTGTGGTGATCGCGCAAT TGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTCTCCACTTTTGGACTGTCACTAGTAAGGCTTGATATCAGGCAAG AGTCGGACCGTCACACAGATGTGATGGATGCCATTACAAAACACTTGGAGATTGGCTCCTACCAGGAATGGTCGGAAGAA AAGCGACAGGAATGGCTGTTGGGTGAGTTGAGCGGCAAACGGCCACTGTTCGGACCTGACCTCCCCCAAACTGAGGAAAT CAGAGATGTTCTGGACACATTTCATGTCATTGCCGAACTTCCATCGGACAACTTTGGAGCCTATATCATATCAATGGCAA CTGCACCATCTGATGTGCTTGCAGTCGAGCTTCTCCAACGCGAAAGCCACATCAAGAATCCATTAAGAGTTGTCCCATTG TTTGAGAAACTTGATGATCTTGAGGCTGCTCCTGCTGCATTGGCTCGGTTGTTCTCAATAGAATGGTATAGGAACAGGAT CAATGGGAAGCAAGAAGTCATGATTGGATATTCAGATTCTGGAAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTGT ATAAGGCTCAGGAGGATCTTATAAAGGTTGCCAAGAAATTCGGTGTTAAGTTAACCATGTTCCACGGTCGCGGAGGAACC GTTGGAAGAGGAGGTGGACCTACTCATCTTGCTATCCTTTCTCAACCTCCTGACACAATCCACGGATCGCTGCGTGTGAC AGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAGCACTTGTGCTTTAGAACACTGCAGCGTTTCACTGCTGCTA CTCTAGAACATGGAATGAATCCCCCATTTTCCCCAAAACCAGAATGGCGTGCTTTGATGGATCAGTTAGCTGTCATTGCT ACTGAGGAATACCGTTCAATTGTTTTCCAGGAACCGCGCTTCGTTGAGTATTTCCGCCTGGCTACACCAGAGTTGGAGTA TGGCCGGATGAATATAGGAAGCCGGCCGGCGAAGAGAAGACCTACTGGAGGCATTGAAACGCTTCGCGCAATCCCTTGGA TCTTTGCATGGACACAGACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCTGCATTTAGACAACTTATTGAGAAG GATGTTAGGAATCTCCATACGCTTCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACAATTGATTTAGTGGAAAT GGTGTTTGCCAAGGGAGACCCCGGAATCGCTGCTCTAAATGACAGGCTCCTAGTGGCTGGGCACAAGGAAGTTCTTGAAG GAGACCCTTACTTGAAGCAAAGACTCCGGCTGCGTGATTCGTACATCACCACCATGAATGTTTTCCAAGCTTATACATTG AAACGTATCCGTGATCCAAACTATGATGTGAAGCACATTTCTAAAGAGAAAAGCAAACCAGCTGATGAACTTGTGAGACT GAACCCAACAAGTGAATATGCCCCTGGTTTGGAAGACACCCTGATTCTCACCATGAAGGGAATTGCTGCTGGAATGCAGA ACACCGGTTAA
Protein sequence (LotjaGi3g1v0158100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYERKHDHEKLEELG KVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNKLKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDAL KNQTVDLVLTAHPTQSVRRSLLQKHARIRNSLSQLYAKDITPDDKQELDEALQREIQAAFRTDEIKRTPPTPQDEMRAGM SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMASNLYYSQIED LMFELSMWRCNDELRVHADELHRNSNKDEVAKHYIEFWKKVPPNEPYRVVLGEVRDRLYKTREHSRYLLAQGYSDIPEEA TFTNVEEFLEPLELCYRSLCDCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEE KRQEWLLGELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPSDNFGAYIISMATAPSDVLAVELLQRESHIKNPLRVVPL FEKLDDLEAAPAALARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAKKFGVKLTMFHGRGGT VGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMNPPFSPKPEWRALMDQLAVIA TEEYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRRPTGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFRQLIEK DVRNLHTLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVAGHKEVLEGDPYLKQRLRLRDSYITTMNVFQAYTL KRIRDPNYDVKHISKEKSKPADELVRLNPTSEYAPGLEDTLILTMKGIAAGMQNTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 845 | 843 | 0.0 | ||
| PANTHER | 3 | 845 | 843 | 0.0 | – | |
| Hamap | 23 | 936 | 914 | 16.185 | ||
| SUPERFAMILY | 33 | 936 | 904 | 0.0 | ||
| Coils | 104 | 124 | 21 | - | – | |
| Pfam | 163 | 844 | 682 | 2.6E-268 | ||
| PRINTS | 167 | 180 | 14 | 7.0E-83 | ||
| ProSitePatterns | 168 | 179 | 12 | - | ||
| PRINTS | 220 | 236 | 17 | 7.0E-83 | ||
| PRINTS | 280 | 295 | 16 | 7.0E-83 | ||
| Gene3D | 308 | 445 | 138 | 2.7E-56 | – | |
| PRINTS | 442 | 462 | 21 | 7.0E-83 | ||
| PRINTS | 591 | 611 | 21 | 7.0E-83 | ||
| ProSitePatterns | 593 | 605 | 13 | - | ||
| PRINTS | 633 | 662 | 30 | 7.0E-83 | ||
| PRINTS | 765 | 791 | 27 | 7.0E-83 | ||
| PANTHER | 843 | 936 | 94 | 0.0 | ||
| PANTHER | 843 | 936 | 94 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Phosphoenolpyruvate carboxylase activity | Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-. | ||
| Biological process | Carbon fixation | A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates). |
Expression pattern of LotjaGi3g1v0158100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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