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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0158300 |
| Transcript ID | LotjaGi3g1v0158300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3-like protein; TAIR: AT2G42590.2 general regulatory factor 9; Swiss-Prot: sp|Q96453|1433D_SOYBN 14-3-3-like protein D; TrEMBL-Plants: tr|Q9M5K7|Q9M5K7_SOYBN 14-3-3-like protein; Found in the gene: LotjaGi3g1v0158300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21654675..21659007) extracted from Lotus japonicus Gifu genome v1.2.
ATCTACCTTTCTCTTCACTTGTGGTTCCACCCTCTCTCTTACCACATCACACTGAGCACAGATAGTGGAACCTCAGTGAG CTCAAATCAACCATGGCTTTCTCCTCCAATGACCGCGACAACTTCGTCTATGTTGCTAAGCTATCAGAGCAAGCTGAGCG CTACGATGGTCCTCTTTCTATCTCTATCTCTCATTTTATCTCCATTCCACTTTCCATCACATTTTAGCTCACTTTTTTTT CTCTGCTACATATACATAGAGCTGTTACTTTACTCTTTCTACATGCTCACATCATGTTCTGAACTATGGGGGAAAAGGGT TTATGAAAATGTTGGGTTTATAATGATGGGTGTTTTTTTAGGCAAATATTAGTTGTTAAATGTTAGTCGTTAGTAATGTT AGTAAATTAGCCCTTCCTGAGGGTTCGAACTCTGGACCCTTCACCCTTCATTCCCTTCAACCCTTATGTTCCTTAGCTCT TACCACTTGAGTTAACCCTCGGGGACTATAATGATGGGTGTTGTGGAATGTGTTTTGAAATTGATTGAAGAGAATTTGTG TGATTTGTAGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGATGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTT CTCTGTTGGGTACAAAAACGTGGTGGGGTCTCGGAGAGCTTCGTGGAGGATCCTATCATCGATAGAGCAGAAAGAGGAGT CAAAAGGGAATGAGTTGAGTGTTAAGCGTATCAGGGATTACAGGCACAAGGTGGAATTGGAGCTGTCCAACATTTGCAGT GACATTATGATAATTTTAGATGAGCATCTTATCCCATCCACGAATGTTGCAGAGTCCACAGTGTTTTATTATAAGATGTA TGTATGCTTTGCTACCTTGATGTTTGTGGGGCTGGTTTTTCGAGTGCTTTTGGTTGTTATGTATCAATTTTTGGTCTTCT AAACCACTTTTGGAGTTTTGTGTTGGATGCAGGAAAGGAGATTATTACCGGTATTTAGCAGAATTCAAGGCTGAGAATGA AAAGAAAGACGTAGCGGATCAGTCCCTTAAAGCATACGAGGTATTCACTTGACCCACTCTGTAACATGAATTTTCCTTGT ATTTCTTTATGCCTGATTGATTGCCACTGACAAGATTGGGATGAACTTTTATGTTTTCAATGTTAGCAGAAAATGTGGGT GGTGGATAAGTAGAGATGTTTTCACCCAAATTCTGGCTATTGAGATCCTGCTATTTAGCAATGACTTTTACTAGGGCTTC AAAATTTATCTGAACATCTCTGTGCCCTATATTTTCATAGGGTCAGGTGTTATCTCAATAGATTGTCTCATGAATTAGTC CTTTTCTACACACGATCAGTTAGTTCGAACATTTAATTTATTTTTACTAGAGAGATAATTCACAGGTCTCATGTCACGAA TCTCTCCCCATTAGGTGACAATTTCCTGCCTAATTGTCATGTTTTTATGCTGTTGACCACTTTTTGGTGTTCAGTGTGGG TAATTTGGAGTAGAGATTATCAAACATAATTGTAGTGCATTTCGGAGTTCCAAGTATAGGAGTGTAAATATCCTTGCCAA AGACTTCTATTTATTGAGGGCCTATTTGACTCCTTTTCCTTCATCTTGTTTATACTTTTCAGTCCCCTTTTTCTTCTTCT GCTAACAGTTTCTCCTACTGAAATTAATTGCACGCTACAAATTATATGTTCAAGATTTGGGGACTAGATGAAAAAAGTTT TAAACTGTTTTTGGGTCCATTGGGTAAAATGAATCTGTTGAGAAATTCTGAAGTATCTTTGTCGTATCCATATCCAATAC TGATGTGCAGATGATACTCCTAGATATATGTATGTGTACCTTAGAAGTATCTTTTCAAATTTTTTACTTTTTCTTAAAGA AATTAATGTTCAATACTTTGGGATGGACCTTCAATATGCTTGGGATACAGTTTCGAAAACCTACCTTAAAGTTTCTTGCA CAGTTTTGTTCTTTATTATGTTGTGAGTTGTGATAGCAATTGGGGTATATATTCCTTTATCTTTCAAGGGAAACGAAATG AATATTTGAAGGGCAAAGGATTTGGTTTATGTGCGATCCAACCAATCCAACCTCTAACTTTTGTCTAGAGAAGATAAAGA ATAAACTAAATGGGAGACAACACTGTTCGATATTAGTGTTGTACATGATCCACTTGATGATGGTGGTGGACTTCTAGAAT TGGCAGAATCATCTCTTGTTTAGCTAGACATGCAAGCTATACTTTTTGTAATTGTAGAAATGAGAGAGATCTAAATGATA TAGTTAGTCTCAGACAGTAAATATGGTTCGCAATTGAAAAGCCAAAACTTCTTCTAAATATGACTAATGATGCTTTTTTT GGGTATTATAATAACATTGAGAACATTGATTGGAAAATATATGTTAATTCTGTGTAGAATGTTTATGAAGTTTTATTAAC GTGTCTTGGTCTTATTGTGTCATGAGTTTTTAAGAATTCTCCATATCACCACCCCATATCATTGTCGTATCAAGTATCTT GGCTTCATAGATTGGAAACTTTATTAGTTTCATAAATCAAGCTTCTTGTTGTAGGAAAAATCTCATTTGAAATGAATTGT CTTTAAAGTGCACAAGTAAGGTTGTATCCATCATTAAATTTTACTGGCCTAAGATAATGTTGTAATGTGAATTATGGATA GATGCACAGCTTTATCTGTTCACTTTACAGAGAAACTCACTTTAGAGTAGTCTTATCTTTTGTGATATTCTGTGTATTAT GATCACAGTTTCTTAGCAACATGGTTAGACGAATGCCATTTGATGAGGTGAATCATATTAATGCCCTCTGCTTTTCTAAA TTTAAGGAATTTTCCTTTCTTTGAAGAAATGTTTCTGCAGATTTTATTGCTTATGTCGAATGACGAATAATATGTCCTTG GAGTTCGCATCAGTTTTTAAATGTCATGTTACCCTCCTACTGTTTATTTTCTTATTCCTCAGCATTGATTTTATCTGAAG TTATTTGTGTTGGTGGGGAAAACCTTTCTAGTTTCCAGCTCCGAAGACTTCAATTGTTGGGTTATGATTATTTGCAGGCT GCTTCTGCCACTGCTGAGAGTGAATTACAACCTACACATCCTATCCGATTGGGCCTGGCTCTAAATTTCTCCGTGTTTTA TTATGAGATAATGAATTCACCTGAAAGGTATGTGGCAGGAAATAGTTTTGGTAATGAGAAAAAAGGTGGTTGCAAACCCT TATTTTCTGTAACTTGTTTTCAGGGCCTGCCGCCTTGCAAAGCAAGCCTTTGATGATGCCGTCTCGGAGCTGGATACCCT GAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTGCTTTATGGACTTCTGATATCC CTGAAGATGGTGGTAAGATATAGATTCTAGAGCTTCTTTCCATATCTTTATCATTCAGGATGCAAAGGTTTTTTAGATTC CCGTAATTGCTGACTTATTGGTTTATACATATTCGGATATTCCTAATCCATATCTGAAAAACATTCCACCAGTTTCTATC ATCTCTTTTTTTCCCAAAATTATGTTGCTCCTTCCCATTATATGTGTATGATATTTGTTGGAGCAAAAAAAAGCTGTGAA GTTGACCACACCAATTATCTGAGCTTTCAGTTGAAGTTCTAATCTTAATTATTGTATGGGATGGTAGCTCAAACCTCTCG TGACTTAGTTTAGTTTTAGTCATGTATATGTGTATAATTTTAACTGGTTGAGTGTCTTATTTTCCGTCTCAGATGACCAA AAAATGGAAAGCGCAGCCATGGGTGGTGAAGGAGAAAATGAGTTGGGCCGCTAACCCGTCGGTATGTCAATACCATGATA TTGTAGTGAATCCTCTATATGGGTGGTGCTCGTCGTCAACTTTTGAGTCATTGTTATTTTAGAGTGACAGCATATTTGAA TTATCTGCTTCATTTGCAATATTGTTGGCTAGTTTTATTTATGTTTCTGCAACAATAGCACCATTGGTTTGTAATGCTTG ATTCCTCTATTTGAATCGTGTTATGATTAAGATCAGCTCGTCGGTTGGCCCTTGAAAAACTGATCACAATTCACAAATGA CCCAAGCCTAATTGCACAATTAAGAATCCTATTAATCGAAGTCTTTTTTTTCAAAAGCAAAATATATATTGATGAGGATA ATGTGAAAGATATACAACCCTTCTCTATAGGGCACAAAAACCAGCAAAGCCAGTAACAACCCAACCAATGAAAAGCAACA ACCAAACCTATTA
CDS sequence (LotjaGi3g1v0158300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCTCCTCCAATGACCGCGACAACTTCGTCTATGTTGCTAAGCTATCAGAGCAAGCTGAGCGCTACGATGAAAT GGTGGATGCCATGAAGAAGGTGGCGAAGATGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGGTACA AAAACGTGGTGGGGTCTCGGAGAGCTTCGTGGAGGATCCTATCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAG TTGAGTGTTAAGCGTATCAGGGATTACAGGCACAAGGTGGAATTGGAGCTGTCCAACATTTGCAGTGACATTATGATAAT TTTAGATGAGCATCTTATCCCATCCACGAATGTTGCAGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACC GGTATTTAGCAGAATTCAAGGCTGAGAATGAAAAGAAAGACGTAGCGGATCAGTCCCTTAAAGCATACGAGGCTGCTTCT GCCACTGCTGAGAGTGAATTACAACCTACACATCCTATCCGATTGGGCCTGGCTCTAAATTTCTCCGTGTTTTATTATGA GATAATGAATTCACCTGAAAGGGCCTGCCGCCTTGCAAAGCAAGCCTTTGATGATGCCGTCTCGGAGCTGGATACCCTGA ATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTGCTTTATGGACTTCTGATATCCCT GAAGATGGTGATGACCAAAAAATGGAAAGCGCAGCCATGGGTGGTGAAGGAGAAAATGAGTTGGGCCGCTAA
Protein sequence (LotjaGi3g1v0158300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFSSNDRDNFVYVAKLSEQAERYDEMVDAMKKVAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNE LSVKRIRDYRHKVELELSNICSDIMIILDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKAENEKKDVADQSLKAYEAAS ATAESELQPTHPIRLGLALNFSVFYYEIMNSPERACRLAKQAFDDAVSELDTLNEDSYKDSTLIMQLLRDNLALWTSDIP EDGDDQKMESAAMGGEGENELGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 251 | 250 | 2.1E-120 | ||
| PANTHER | 3 | 263 | 261 | 3.6E-165 | – | |
| PIRSF | 3 | 249 | 247 | 2.8E-115 | ||
| PANTHER | 3 | 263 | 261 | 3.6E-165 | ||
| SUPERFAMILY | 6 | 238 | 233 | 6.54E-102 | ||
| SMART | 8 | 249 | 242 | 2.6E-165 | ||
| Coils | 14 | 34 | 21 | - | – | |
| Pfam | 15 | 236 | 222 | 6.3E-102 | ||
| PRINTS | 40 | 69 | 30 | 6.5E-84 | ||
| PRINTS | 89 | 113 | 25 | 6.5E-84 | ||
| PRINTS | 120 | 142 | 23 | 6.5E-84 | ||
| PRINTS | 155 | 181 | 27 | 6.5E-84 | ||
| PRINTS | 182 | 208 | 27 | 6.5E-84 | ||
| PRINTS | 209 | 238 | 30 | 6.5E-84 | ||
| MobiDBLite | 238 | 263 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0158300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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