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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0164400 |
| Transcript ID | LotjaGi3g1v0164400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lysine ketoglutarate reductase trans-splicing protein (DUF707); TAIR: AT2G28310.1 trimethylguanosine synthase (DUF707); Swiss-Prot: sp|B7LHT2|NANR_ECO55 Transcriptional regulator NanR; TrEMBL-Plants: tr|A0A1J7I2Z9|A0A1J7I2Z9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0164400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22366789..22373447) extracted from Lotus japonicus Gifu genome v1.2.
GGTATTTTGAGTTACTTTCACCAACCCAACCTGAAATCAAATAAAAACCTGAAGATTAATAATAATAAGTGTCTATTTTT CTGCTCAAGACTAATTCTTCAGTTTATAGTCGCTGACTCTCTCTCAATTTGATCCGAGATCGAAGAACAACATCAACAAC ACCAAAAACGTTACCGTTTCATCAATCGACTCTGTAAGTTCAACAAAAACGTTGCCGTTTCTTTTCTTCGAAGGAGAAGT TGTAACATCTTGATTTTCCACAGTTAAATTCGCTGTTGTATTGTTGCTCGTTTTCGTGTAGTTAGATTCTGTAATGCAGA TCAACGGTGCAATCTGGCTGTGAATTTGCGCAATTTTCTTCTTCAATGGTAATTTTGGTAGCACAATGTCTGTTTCATTT TTCAGATTTTGCTCTTTTAGTTTATTTTAATTTTTGGGGATAATTGCGCTGTGATGAGTTAGCGATTTTGATGCAGTTTA AGTTCTCTGTTTCTAGAGTATCAGAAATAGAAATGCTTACTTATGTTATGTGAGTAATTAGTGTACTTAAGTGTTAAAGC TAAAACCCACATCAGTGTTCTCTTTGTGCTTAAATGGTGTTATGCTGACAAGGTTTGAGCTTTGAGGAGCCTATGAATGA ACCATAGTGGTTTTAAATCCTTCATACTGTATTTGCTTTGGCTTTAAAAATCATTCATCTCATAATACCTTCCTCTGGTT CTCTCTCTGGCTCACTTAAGCACACACAGCTGACAAAATAGGTAAGTGAGCCATCTTTTACAACCATTTGTGACGTGTTT TTTTCGATACACCCACATGAAACAGAACAAGAAAAAAAAAATTAGGTAAAGGGGTGAAATTCTAACACATTAAGCAAAAT AAACTAATTGGAAGAGGCTGTATGAAATTTTTGAGGAGGGTAACTACAACATTTATATATTATTCTATTAAGGAAAGTTT TGGGGAGCGACTGCCCCATTTTCCATTTTGGAACAAGTACTACTACCTAGTTCTGTGTCTGTATGGTTGCATCCATGACT TGCTTCATTTAGATGAACTGACAGAGATATGGATGGAACACGGATAGATAGAGAGATAGGTATATATTTGCACACACTAA ATCACTAATACACACCCAGCCTGACCACTACTCTACTTGTGTCTTACACTCACTTTTTGAATTGTTGAAGGACGGCCTAC ATATTTGCTTCAGAGTTTGCATAAGGATTTAAACATTTTCTGGGTGATAAATACCTGGACTTGATTGTGGGAGATAACAA CTGCTTGAGAATCATGCATCGCAGCAGGTAAGAACAATTTTTCTTTGTAGCTTAACCGAGTAATGGTGCCTTCCTTTGCT TTATATTTTTATACAAATATTTGTTTTTTTGGTTTTACTCGCACTTCTTCTTTTGTGCCCATTCCAACCTAAACGGCTGA ACTTAGTTTCCTGTTTCTTCTTTAGTGCACTTAAAAGATCAAATGATAGTGCCAGGATTATCATCACAGCAATCATGGGA ATTGCCTTTGGTTTTTTTATTGGTATTTCAATTTCATCCGTCCATTTGACTAAGGTAATATTTGCAACTTTGATTCTTTT CAGTGTTGTGTCAGGAATTCATCATCTTAAATTTCTTTTTTTTATTTTATATTTTGCAGATTAGCTTACTTTCTGGTGTA GGGAATTCTTTTGATGTATCTATACCTGAAATAGATAGATTTTCAGCTGACATAGACAGAACTCATGCTGTTATGGACGA ATCTTCTGGAACCAAACATCTCGAGGCACTAGGATCAATGAGATTACCTAAGGTAATTTCCATTCTTATTCGTTAGATGG ATGTGAATGCATACAGTTAAATATAAAGCTGCAGATTTGAATGAGTAATTATCTTCCCATAAAACATCCTTCGGTTGTTA GCATTTAGAACACATATAATGGATGAAATTTTCATTAGAAAGGCTGAGTTTATTCTTTGTTACTTTCTTTTCAAAAATGG TCTTTGTTTCAATGTGTATAATTATGAGTTTGTTTGGAATCGATTACTACCTTCTTTTAATGCATTGGAATGCCAAATTC CAAAGTAGAAAATGTGAAAAGAATGAAAGGTCTATGTTTGGGTTGAATGGATATTAGAAAGTAATTTTAGTGCAAACATA TTCTACATTCCTGGAAATAATATTCCAAGGAGTGATATCCTATGAATACTTTTGTTAAAGTTGAACTACCTTATAGAATT ATTACCTGCATTGGTTTTTGCTGCATTGCAGCTATAGATCTCATTTATGATGTCACCATTACATAATTATACTTGCCTTA GGTTAGCAGCATATTATTTATCTAGCAAATCAAGTCTGATTTGAAACTGCTACTTTCACAGATAAATGTTCCATCAAATC CTCGTGGAGCTGAATCACTACCCCCTGGAATTGTTGAATCAGAATCTGATCTTTATTTGCGTAGACTGTGGGGAGAACCT AGTGAGGTATATGATAAAGACAGTTATTTACCATGCAAGAAGTTTCTGTGGCTTATAGTTACAGTACTGCAAATATGACT CTGTTTGACCTATCTGGAAATTGAAACAAACCCCCATGTACTCTCTCTTTCTCTCACACACATTTACATGTGTTATCTAT GGGCTTTGATATCGAGTGTGTCACGGGAAACACAGAGCCGTTCTTAGCAATGTTTACTCCATACTTCAATGACTCAATCT AAGTTGCACATCATATAAGAGACAGATAAAAACAAAGTTCCCTGATGCATGCCTAGCATGCTCATATTGGCTAGGGATGT GCATTTATCTTAATTCTGTCTTCATGAAGCTTTGATTCTGAATTCTCAGGATCTGAAGAAAAAGCCAAAATATTTGCTAA CATTCACAGTTGGTTATGATCAGAGGAATAATATCAATGCTGCAGTAAAAAAGGTGAGACTGATTGATGAAGTTTATATA AGTTAATACTTGTACATTTAACATTTCATATTTTCTTTAAAAAAAATACTGACTATCAAATTCTTCTGTAGTTTTCTGAT GATTTTGCAATTTTGCTCTTTCATTATGATGGTCGAACTAGTGAATGGGATCAATTTGAGTGGTCAAAGAATGCAATCCA TATTAGTGCAAGGAAACAAACGAAATGGTATAACTTTTTTCATACCCCTTTTGCATTTAACTTTTGAAATTCATAAGCAA AGCATTTGGCAGTGGGAAGCCAATTTTCTGTGTTCACATATAATTTAGGAGTGGTTATCCTATTGCTTTGCTCCTGCGCT TTATTGAATTTGCTCTTACTTGATGTTATACAGGTGGTATGCTAAAAGATTTTTACACCCTGATATAGTATCAGCTTATG AATATATTTTTATTTGGGATGAAGATCTTGGAGTGGAACACTTCAATGGAGACAAGTATTATTTTCTTCTTTCTAGACTG CTCAAATTGACATTATTGTGACTTTTAGTCTGACTAACTTGCTATATTCTATTCACCAGGTATATTGATTTGGTCAAAAA ACATGGTTTGGAGATCTCTCAACCTGGTCTGGAGCCCAATAACGGATTGACATGGGAAATGACAAAGAGGAGGGGTGACA GCGATGTTCACAAGTATTCATTTGGCTTTCTCTTTCTAACAATAAGCATAGATGTAATAAAGGTGCTTTTCTTCATGACT TCAATTGTTTTCTAAAATCTTACTAACATTTATGTATGAATTGGTGAATAGGGTTACAGAAGAGAAACCAGGCTGGTGTC GTGATCCACATCTGCCTCCTTGTGCTGCGTATGCTCTCTTTTCTTCCCTGGTCCAATGTTTAATTTGTTATATTGAATTG AATTATCATTACATGGACTTTCTTTTCTTGTCGAATTTGTCAACATCATTATGTCTTGTGTTATTTTAGATTTGTGGAAA TTATGGCGCCTGTCTTTTCCCGGGAAGCATGGCGTTGTGTGTGGCATATGATTCAGGTATATTTATTTTTTGGTATCACA TGTGATTGGTATGGTAACTTAACTGAATGAATAGGTGAATTTTTCTTTTGTGTGATATATGCAAACTTCTTAACTACCTT AATGAATTTTATAATTATATTCTTGTAGAATGATTTAGTGCATGGATGGGGACTGGACTTTGCTCTCAGAAGATGTGTAG AGGTCAGAGATTCTATCATCTATTTCTTTAAATCCATTCTATGGTTTTATATATTCTTGAACTAGTCAAAGAGGCTTCCA GAGTCCCGTGTCTTTTGTCCTTCTCATGTTTATGAATCTTCAGACCGCTATTTTTGTGTGGAGTACGTTATTTTGTGCTT AATATGGGGTTATATTCTCATCACTTAAAATCTTCTTAAACCAAGCAATTTGATTTAGTTTATCTTTCTTTAATTTGAAT CATTTTGCTGGTTTTCAGCAACCCGCACATGAAAAAATTGGTGTAATTGATTCCCAATGGATTGTCCATCAAGTAATTCC TTCTCTCGGTAGCCAGGTTAGTCATCGTTGGCTTACAGAGTATTTATCGCCGCTTATTCTTTTGATGGTAACATTCTAAA TTGTGTTATTATAACTGCATGTGCTTGTTGGGATTATAAGCACTAATAGAGCCTTAGATTTTAAGATAGTTGCTTAATGA CATATATCAAAGTCTTTATAATCAAGTTGTCTAGATTCTAGAGTTTGATTCTTGTTCCCCCCTTCTTCAAAGAGCTCGTG TGATTGGACATATAGCTTAAGCTTTTGAGATAATTACTTCATAACACCTCTAAATCTCATAGCATTATCTATAATCATAG TAAGTTTTTGTTGCACACTTGTACTCTTAGATATGTTGATTATAGTTCTTTGATAAATAGAGAAATGTCTTCACGGGTAA GTGTTTGTATGAATTTGTCTGAAAATCACATTTCAGTGTAATTCCTTTTAATTACAGAGCAAATTAGTATCTGTTGAACC CCAATGCATCCTTCAAATTCTTCCTTTTGCAAGTGTTTTTCTTTCTCTTCTTTTTTTGGGTATGGACATTTTTGTTAAAA AATCAAGGCTTAACTGTGTTAGATTTTTCTCACTTACGTGGTAATTAGGATTTTTTCGCATATTGGTTCTACTTTGGGTT TTCATACACATCGTACAAAGCTAGAAGTATAGTATAAAAATCATTGATGTCTCTTCACCTAATAGCTTTTGGAATAGTTG GTTCATGACATGATATCAGAATCTCTATGACCAAGTGGTTGAGTTCAATCCTTTGTTACTTCAATATTCTAATTAATAAA AAGTTGAAATTCAGTCCAAGGTAAATGAATTTATGCATTTTCCACCTTTAAACCCAATGACTCTTGCGTTAGGGGCGTGG TAAAAGTATATTAAAACCATTATGTGTCTTCACCTAATGGTTAAAGTTTTTGAGATAGTTAATTCATGACATAAAACATA TATTATTGAGTTAAAATATTCTACCAACCTGAGAAACAAGACAAGAAATTATTGCTTGTTCATGACAGTACATTTGTGCC TTTACTTATCTTGCAAGAAATCTTGTATTAATTTTAACATATTAATTTTGAGTTTTTGTATACTTCAGGGAGAAGCCCAC GGCGGAAAAGATCCACGAGATGCGGTATGTGTACTTTCCCATGCATACTTGCACCATTTTTTTGCATCAACAACTGCACA CCTGGCATCTCATTTTAGAGTGTGTTTGGATAAATAGCTTAATTAAACGCTTATGGCTGTAAGCGTGTGTTTATTCATAA GCTAATTTGAGAAACTTATTGAAATAAGCTGAAAATAGCTTATGGATAAGCATAAGCTCTTATCGACAAGCTAATGTGAA TAGCTTATGAAAATAAGCTCAAAACAACTTTTTAGTGGGGCTTAAGCTATTTACATAACCTCTTCCAAACATTTGGATTA ACATTTATGCCATCAAATAAGCTCTTCCAAACGGGGTCTTTAAGTATTATTTGTGCTTCATTTGCAATTATGTGTTAACT ATATCATTAATCCACTACTGTGTCTATTATTATGGTTTTCTGGTGATCATTTCAGGTCCGAACCAGATGCAAAAGTGAAT GGGCCCAATTTCAAGCTCGCCTAACCGATGCTGATAAGGTGTATCTTCAAGGACTTAAACAAATTGGGAAGGGTTGATGT ATGGATCCATCTTCCTATTGTACATGTTTTACATGCACTCGAGGGTGTTTTGTTGTGTATTGATTTCTTCCCTCAAGTGT AATTTTTGACGTATGTAGACTCTCTAATGATTTATGATTTTTTATAATTTTTTTTAATAATTCAACTGATGGACCAGAAT CGTCTCAAAGATGGAAGTCACAATTTCAGGAACTAAAATCACACATTGTCTAAAACTAGAGGATCAAAATGCAACAAAGA AGAAAAAGAACAGCTACAAATGATTAATAGGACGTAAGAAAGGCCATGGAAGAGTGAAAGACAAATCATGGAATACTGAT GACAAGTGTTCTTATAGTATATTCCAACCACTCTTCCTTTGCAAAAGTCACTACAGCAGATTATTCCAGAATCACTTGTC TTAACGTAGAAATTTATCGGGTTCTAAAAAATACACAATACTCATGCCAATTGTGGTACTTGAATTAATGTGGAAACCAA ATCTACCATGCTAGAACAC
CDS sequence (LotjaGi3g1v0164400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCGCAGCAGTGCACTTAAAAGATCAAATGATAGTGCCAGGATTATCATCACAGCAATCATGGGAATTGCCTTTGG TTTTTTTATTGGTATTTCAATTTCATCCGTCCATTTGACTAAGATTAGCTTACTTTCTGGTGTAGGGAATTCTTTTGATG TATCTATACCTGAAATAGATAGATTTTCAGCTGACATAGACAGAACTCATGCTGTTATGGACGAATCTTCTGGAACCAAA CATCTCGAGGCACTAGGATCAATGAGATTACCTAAGATAAATGTTCCATCAAATCCTCGTGGAGCTGAATCACTACCCCC TGGAATTGTTGAATCAGAATCTGATCTTTATTTGCGTAGACTGTGGGGAGAACCTAGTGAGGATCTGAAGAAAAAGCCAA AATATTTGCTAACATTCACAGTTGGTTATGATCAGAGGAATAATATCAATGCTGCAGTAAAAAAGTTTTCTGATGATTTT GCAATTTTGCTCTTTCATTATGATGGTCGAACTAGTGAATGGGATCAATTTGAGTGGTCAAAGAATGCAATCCATATTAG TGCAAGGAAACAAACGAAATGGTGGTATGCTAAAAGATTTTTACACCCTGATATAGTATCAGCTTATGAATATATTTTTA TTTGGGATGAAGATCTTGGAGTGGAACACTTCAATGGAGACAAGTATATTGATTTGGTCAAAAAACATGGTTTGGAGATC TCTCAACCTGGTCTGGAGCCCAATAACGGATTGACATGGGAAATGACAAAGAGGAGGGGTGACAGCGATGTTCACAAGGT TACAGAAGAGAAACCAGGCTGGTGTCGTGATCCACATCTGCCTCCTTGTGCTGCATTTGTGGAAATTATGGCGCCTGTCT TTTCCCGGGAAGCATGGCGTTGTGTGTGGCATATGATTCAGAATGATTTAGTGCATGGATGGGGACTGGACTTTGCTCTC AGAAGATGTGTAGAGCAACCCGCACATGAAAAAATTGGTGTAATTGATTCCCAATGGATTGTCCATCAAGTAATTCCTTC TCTCGGTAGCCAGGGAGAAGCCCACGGCGGAAAAGATCCACGAGATGCGGTCCGAACCAGATGCAAAAGTGAATGGGCCC AATTTCAAGCTCGCCTAACCGATGCTGATAAGGTGTATCTTCAAGGACTTAAACAAATTGGGAAGGGTTGA
Protein sequence (LotjaGi3g1v0164400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRSSALKRSNDSARIIITAIMGIAFGFFIGISISSVHLTKISLLSGVGNSFDVSIPEIDRFSADIDRTHAVMDESSGTK HLEALGSMRLPKINVPSNPRGAESLPPGIVESESDLYLRRLWGEPSEDLKKKPKYLLTFTVGYDQRNNINAAVKKFSDDF AILLFHYDGRTSEWDQFEWSKNAIHISARKQTKWWYAKRFLHPDIVSAYEYIFIWDEDLGVEHFNGDKYIDLVKKHGLEI SQPGLEPNNGLTWEMTKRRGDSDVHKVTEEKPGWCRDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFAL RRCVEQPAHEKIGVIDSQWIVHQVIPSLGSQGEAHGGKDPRDAVRTRCKSEWAQFQARLTDADKVYLQGLKQIGKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 390 | 390 | 3.4E-217 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 390 | 390 | 3.4E-217 | ||
| Phobius | 12 | 34 | 23 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 35 | 396 | 362 | - | – | |
| Pfam | 97 | 384 | 288 | 1.0E-138 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0164400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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