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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0164600 |
| Transcript ID | LotjaGi3g1v0164600.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytokinin riboside 5'-monophosphate phosphoribohydrolase; TAIR: AT2G28305.1 Putative lysine decarboxylase family protein; Swiss-Prot: sp|Q8RUN2|LOG1_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1; TrEMBL-Plants: tr|A0A072VC46|A0A072VC46_MEDTR Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Found in the gene: LotjaGi3g1v0164600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22389308..22395802) extracted from Lotus japonicus Gifu genome v1.2.
AGATTAAAATCTCCCTCTCCCTATGTACAACTTTCAACTTTGGTGAGTCAGCGTCATCTTCTATGATGTGGTTAAGGACG TGTGCTGTGTGCCATGTTCTGCCATTATATATAGTATAGGTTCCTCATATACCATCAACCGCTCATTCATCTATTTTGTC TACCTTTGAGACACAGTGTGAGAGAGCAAGAAAAAAAAATCAAAACAAAGAGGGAGATGGAGAGAGAACTAGAGATGAAG TTATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGCTACAAGGATGCTGCTATTGA GCTTGGAAAGGAATTGGTAATGTCCATGTAGCTCTCCTCACTTATCTGTTCTGCTTTTTCTTGAGGAATTGTATTTCACT ATTCAAATTCAAACAAACTTGTGCTTCTCTCAAATTGAATTTTTCATGCACTGCTTTGAATTTCTTTTCTTATTTACCAT CATATACAGCTTACGACTTTGAATTACATCAATCTCTCTGTATGATTTGTCTTTCTTTCTTCTCTAACAGTCTAACTTAT GTTTTGATGCTGTTAATGGTTTAGTGTTTGATACATGATGTCTAACCTAAAGTGATGGTAAAATGTCACTTTCAAAACCA TCTAAACTACAATCATTTTTTAATTTCCATTTCAGCTTCTCTGTTTTTTCATGAATATTTTTTGTTAAGCTTTTAATTAC ATACAAGCATGTAATTTTCTTAGTTTCACAGAATCATGGTCTTAACTCTTAACTTTGGGTGCTACTTACATATTAAAAAG GTATCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACAATGG TGGTCGCCATGTAATTGGGTTAGCTCCATCTTCTTCATGACTTGTATTGTTGTGAACTTGTGACATAAATATAATACATA TATATTATAGCTCAAGCAAACTAATTTTTGTGTTACTTTTGTCTGCAGAGTTATTCCCAAAACACTTATGCCAAGAGAGG TAATGTTAAGGTGGTTTGGAAGCATTTTCATGAATTCATCATTGCAAATAAAAAAGAGGAAAATGACAGAACAGAGAATT ATCTTAAACTTTTTTTCCCTTTCCAGTTTCCACCACAACAATACATAACATGCTCTTCTTCTTCCATCCTTGTTCCACCA CCGAACTTTAAATTTGCACCATACTTTTGTTATCCCAAAATCTGAGTTTCAACACTGGACACTTGTCCTGTTTTTGGTAT TCAAGTGTTGTGCGGTTCTAATTGGAACTTGGTTGCGGTGAGGGGAGGATTTGACACCTCACTCATTAGAAATGTCACCC ACTTAAAACAAATTTTGGAAACTTAATTTCCGAAGTATTTTCTCACTCAAAAGTAAGATGTTACGTCGTATTTTGCACTA CTAAGTATGTAAATTTCGGAATATTAAATTCCAAAATAATTCGAAATATAAAAATCCAAAAATTGGGGGTGTGAAATTCA AGTAGTGGGGTAGGAAATTAAACCCCCGGTTGTCGTTGCTTATTTCTCATTGAGTTCACATTTTGAGTCTCTTTCTTTGC AAACCCTAACTTATCCATCAATACACCTGGCAATCTGGGGTCTTTCCTTCCTGCACCATTTTGTCCTTTCCCTCCAAGTT TTTCTGTTACCCTCTTAAGATTCTTGTGCCATTCCTTGTTTTATCCCTTTATCACTTAGAAAGTAATTAACTTTGTTTGA TCTTTTATCTCTTCTGGTGAATCTTAACTTGTTTCTTCTCCCGAGGAGAAAGGAAACATGATGTCCACCAATTCAGCTCA CTTCTGCTTCTGCAAGACTAGAACACTAATCATTACATTTCCAACATGTTTGAGTATACGGTGAAAGCAAAATTATAGTG GACAATCACAGAAGTAAATAAAATTTGTTTTTGTCATTCGTGATTTTGGTTCATCTTGATTTTGTACCGTGTATTTAAAT AAGCACAGTCAGAAGTATAATAGTATTGTTTGAGTGATGAGCCCATTTCTACAAGACTACAACACTGATCATTACATTTG TAACATGTTTAAATATACGGTGAAAGAAAAATTACTGTGGACAATCACAGAAGCTAGAAGTTGTTTCTGTCCATAATTGA CTTTGGTTTCCATGTATCTAAATAAGCATAGTCAGAAGTATAATGGTATTGTTTGAGTGATGAGTTGGGTTGATTTGGGT TTCTCGGGTGTTAATTACAGCTTACTGGAGAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCATCAAAGGAAAGCA GAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTTCGTACAATACTAGCTACTTATTCTTTGAGACATTTAT GCATATACCTTTTATGTATATGAATATTTTCATCACATGATTCTACAATATTATCATTATGCTTATGTTTAATTCACATA AAATTGACATAAAAGCAAGCTTATGTATTAGGACTTCACTTAAAAAGATAAAACAAAACAGTTTTAAGGGATGGGGTATA GACATGTCTGCGGACGAAGTCCGTACATTATCCCAAGAGAATATTTGATCTTGTGCACCACTTAAGATTAGATGGTGCAT CATAATGACAAAAATTTTAGATTAGGTTCCAAAGCAAAAAAACATCAAATCAATTATCCATCAATGCTTAGTGCAACACT AAAACTTTCAATATTACACAACGTGTAATTAATGTTTGATAAGGAAAAAGTTTTGTTGACTTCCACCAGGTCAAATATGA AGAGAAGAGATGAGTAGTGATATGATAGGTAGTGTGATAGAAAATGTAAAAAGATATGGGAAAAAATGAGTACATATGAA ATGAAAGGGAAAATAAAGTGTTAATGTATCAAAACTCATTTTATAATCAACAGGGGCGGAAGCATAAAAATTAAACATTA AGCAAAATTAACAATGATTAACTAGAAAATGTAGTATAAAACTTTTAAGTAGGGATGGCAAAACGGGTTAGCCCGCCCTG CCAATAACCCGTCACAAACGGGACGGGTTGGGCTAGCCCGCCAAAAAAGTGGGCTCAAAATCCTAGCCCACCCCGCCAAA GGGCGGGCTAGCGGGCCAGCCCATGGGCCAATATATCAATGAAACAAAAAACAATCATTTTAGTAGAAAAACTTAGAATA ATTCTTGTATTATATTTTTTTCTAAATAATAAGAGATAATGCAAATAATAAAAGTGTAACAAAGAATAAAAACAATATTT TTGACAATTGACATAGATACATCTATAAATATATAACAAATAATGCAAATAATAAAAAATTATGAATTATGAAGCTGCAT ATCTTATTTTATAGACACAATATATGGGTGTACTATACAATACATAGTTACATACCAAAAAGAAAAAAACGTGAAGTAGG AAGAGAGAATAAAGTTTTGAATTTGAGAGTGAAAGAAACAACTCATATCAAATTGATAAATTATCAAACTCAAGAAATAG AAATTTAAAGCTTTTTTTTAGAATCAAACCATATATATATATATATAAGAAAAGTAGCAGGTTGAAAAACTCATACAATA GAAATATTATATATATAAAAAAAAATAATGAAAGAAGAAAGAAACGGGGGAAGCAATCAGTACAGGGACATAAAAGAAGG AAGAAAAGAAAAATGCAAAACAGTACAAGAGCCAAGAACACATAGCAAGAGACACGCTGCAGCATAGGAATTATTGCAGA TAAAAGGAAAATACAACTGAAAAGATGAAACAAAGTGCAAATAACACTTTGTTGTGGGCTATGGGCATAGAAGAATTTTT ATAAAAAAGAGGAAAAAAAATTTAGCCCAACAACGGCAGCCATACCCCTCACCACACCAGCAAAAAAAACAAACAAAGCC CGCGGGCCAGCCCGCCCCAGCCCGTTAAATTACGGGCCAAAACGGGGGCGGGCTAACATTTTTTTTGGGCTACATTTTTC AGCCCAACCCGTCCTATAACAGTGGCGGGGCGGGCTGGCCCAACGGGCTGAGCCCATATTGTCATCCCTACTTTTAAGAG GGTGAGTACAAATTTGTACACCATATTCGATTAAGAGTCATTGAATCTTAATTGGGCAAAGGGTGAAAATACAAATGAAA ATAGGTCAGGCTGCCGACAATGATCTAAGGCCTAACCTACATCTGACTCAGACTCAAGTCAGACTAGACAAATTGGTAAT AGATAAGGTCAAAATTTTTAGAAGCCTATTTAGTTCAAAATGTCATACTTAAGTTACTTAGAAAGCCTTATAAATATAAC AGATCACCTTATGTCAATAAATATAATTAATGTAGATGTATTTTATCATCTTACAATGGATTTTTTATGATGTCATAAAA TTATATACTTATTAAATTAATTATATGTATAAACATATTAGATTATATAATGATTTAATTATGAAATCTCTTTAGAAAAG ATCTGGTGACCTGTTTACTTTAACTAAGACGACATATTTTAGCTCATTAGTTTAAAAGTTTATTGGCATATTTACAAATA AATTTATCAATCTACTCGAACATCTTATTATAAAATATGCTTATAAAAATGCTATCAGGTCAGACGAAACCTAAAAGAAA ACCTATAATAAGAAATAAGCTGGACTCAAACTTTGAATTTTTTAAATAGCTTAGACCTAATTAAGCAGGTTTAGCCAGTT CTCACTCCTAGGAGAAATAAATTTTGGTTTAACCTAGAAGAGACAATGGAAACATTTTAATCAATTACCAAGATGGAAGT AAAATATAAATCAAGTGGTCCTGCTCCACTCACTTTTTTTGGGCAATATTGAACCCAAAAATGGATACACCCAACACAGA AGTTGATCCTACAGTGCATACCAAACAAATAAACATTAATCTCAGGCCTGCCACTCGCTTGAGCCTAGTTCTGCGCACCA AGGTGGGCTCAGCCCATTGTTATACTGCATTTTTCAGTTATTCAATGAGAACACATTTGTTTGACAAAAAAATATGAGAA CACATTTTGGCACAAATGATGTTCTAATATTTTATTAAAATTACCATTTATCTCTCTAATATTTCCTATTTTAACTCTTT AATTTTCCTGTACTTTTAAGAATTATATTAACGTAAAGGTATAATTGATAAAACACAATTAATGTTCTTTTAAAAGTATA AAAATAATAGATGAATAAAAGTAAAAGATTCTTAAAATAGTGACAAATAAAAAGTAATGGAAAAATATATTTCTTAAGTT TGAAACCAATATTTCTTTTTGTGACATTCTTTATGTTCATGAAGGTGGCTATGGGACACTTGAGGAGCTCCTTGAAGTGA TAACATGGGCTCAACTTGGAATTCATGATAAACCGGTAAAGTCTCTCCTAAGGCTCCAAATATATTTTAAGCATATTTGG TTCATATTTCTATTTCCATTTTATTTTCAGTTTAAATCATTATAAAAAAGTTTGAAAATAAAAACCAAATTGACATATAC TTTCATGTTTGAAAAAGTTTGAAAAATAGATTGTCATTATGAAAATTGGTGCCATCACTTACCATTTTATTGGATGATAA TGGTTAACAAAAGTTCTGGTTAATTTTGGTAGGTGGGATTGCTGAATGTAGATGGATACTACAATTCCCTTTTGTCTTTC ATTGACAAAGCTGTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAACACCAAAAGAGCT TGTAAAAAAGATGGAGGTAATTTCAATTTTTTCTTTAAGAAAATGATTGACGGACATTCTATTTCACGATATATATATAT CCTTCTGACATATGATTTAGTGACAATTTTTAACCTCCACAACACTATGTCTGAACCGTGTCTACGAAACTGATGTGATT TTTCTTCACCCCTATAGGAATATTTCCCAGTACATGAAAGAGTTGCCTCCAAGCTAAGTTGGGAAAATGGGCATCAAGAT TAGCCCTAAATTTGTGAAATCTGAAGATGATTAGAAGATGAAGAAAAATTGATGTAGAGGACAGTAGTTTGTCAGAATTT CAGACAGATAAGTAAGAAGTCTATTACCGTAGAAGGACACAATTTCCTGGAGCCGCATTCTTTGTGCTCTTGTATTTCCT TGTTAGTGTAAACTATTAGATATGTTAAAATCTAGCTAGGAAGTCTAACTACCCTGTTCAATGTGGATTATGGTTTTTTT TCTACAAGACTCATTCCATTGATCAAAAGGAGATTTCGGGTAGAACTTTGATAATTTTTGTAAGATGATTGATCTTAACT TTATCTTCTTTTTTTCCTGCACTTTTTACCACTTCTTTTTTTTTTTTACCACTTCTTCTTTACCACTTCTAAGCATGACA ACAAAAATCAAATCGATGAGGAGTATTCACCTAACTCCATCTAGAATTTGATAGGAAAACACATTGTAATTGAATTTAAG TAAAAATCGAATCCG
CDS sequence (LotjaGi3g1v0164600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGAGAACTAGAGATGAAGTTATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAAC TAGCTACAAGGATGCTGCTATTGAGCTTGGAAAGGAATTGGTATCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCA TTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACAATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAAACACTTATG CCAAGAGAGCTTACTGGAGAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAA GCATTCTGATGCCTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGAGCTCCTTGAAGTGATAACATGGGCTCAAC TTGGAATTCATGATAAACCGGTGGGATTGCTGAATGTAGATGGATACTACAATTCCCTTTTGTCTTTCATTGACAAAGCT GTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAACACCAAAAGAGCTTGTAAAAAAGAT GGAGGAATATTTCCCAGTACATGAAAGAGTTGCCTCCAAGCTAAGTTGGGAAAATGGGCATCAAGATTAG
Protein sequence (LotjaGi3g1v0164600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERELEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYNGGRHVIGVIPKTLM PRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA VEEGFISPTARHIIVSAPTPKELVKKMEEYFPVHERVASKLSWENGHQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 189 | 187 | 2.5E-86 | – | |
| PANTHER | 4 | 205 | 202 | 2.8E-136 | – | |
| PANTHER | 4 | 205 | 202 | 2.8E-136 | – | |
| SUPERFAMILY | 11 | 190 | 180 | 2.75E-62 | – | |
| TIGRFAM | 13 | 190 | 178 | 1.3E-63 | ||
| Pfam | 57 | 187 | 131 | 1.3E-46 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0164600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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