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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0164600 |
| Transcript ID | LotjaGi3g1v0164600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytokinin riboside 5'-monophosphate phosphoribohydrolase; TAIR: AT2G28305.3 Putative lysine decarboxylase family protein; Swiss-Prot: sp|Q8RUN2|LOG1_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1; TrEMBL-Plants: tr|A0A072VC46|A0A072VC46_MEDTR Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Found in the gene: LotjaGi3g1v0164600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22389997..22395574) extracted from Lotus japonicus Gifu genome v1.2.
CTAGAGATGAAGTTATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGCTACAAGGA TGCTGCTATTGAGCTTGGAAAGGAATTGGTAATGTCCATGTAGCTCTCCTCACTTATCTGTTCTGCTTTTTCTTGAGGAA TTGTATTTCACTATTCAAATTCAAACAAACTTGTGCTTCTCTCAAATTGAATTTTTCATGCACTGCTTTGAATTTCTTTT CTTATTTACCATCATATACAGCTTACGACTTTGAATTACATCAATCTCTCTGTATGATTTGTCTTTCTTTCTTCTCTAAC AGTCTAACTTATGTTTTGATGCTGTTAATGGTTTAGTGTTTGATACATGATGTCTAACCTAAAGTGATGGTAAAATGTCA CTTTCAAAACCATCTAAACTACAATCATTTTTTAATTTCCATTTCAGCTTCTCTGTTTTTTCATGAATATTTTTTGTTAA GCTTTTAATTACATACAAGCATGTAATTTTCTTAGTTTCACAGAATCATGGTCTTAACTCTTAACTTTGGGTGCTACTTA CATATTAAAAAGGTATCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGC TGTTTACAATGGTGGTCGCCATGTAATTGGGTTAGCTCCATCTTCTTCATGACTTGTATTGTTGTGAACTTGTGACATAA ATATAATACATATATATTATAGCTCAAGCAAACTAATTTTTGTGTTACTTTTGTCTGCAGAGTTATTCCCAAAACACTTA TGCCAAGAGAGGTAATGTTAAGGTGGTTTGGAAGCATTTTCATGAATTCATCATTGCAAATAAAAAAGAGGAAAATGACA GAACAGAGAATTATCTTAAACTTTTTTTCCCTTTCCAGTTTCCACCACAACAATACATAACATGCTCTTCTTCTTCCATC CTTGTTCCACCACCGAACTTTAAATTTGCACCATACTTTTGTTATCCCAAAATCTGAGTTTCAACACTGGACACTTGTCC TGTTTTTGGTATTCAAGTGTTGTGCGGTTCTAATTGGAACTTGGTTGCGGTGAGGGGAGGATTTGACACCTCACTCATTA GAAATGTCACCCACTTAAAACAAATTTTGGAAACTTAATTTCCGAAGTATTTTCTCACTCAAAAGTAAGATGTTACGTCG TATTTTGCACTACTAAGTATGTAAATTTCGGAATATTAAATTCCAAAATAATTCGAAATATAAAAATCCAAAAATTGGGG GTGTGAAATTCAAGTAGTGGGGTAGGAAATTAAACCCCCGGTTGTCGTTGCTTATTTCTCATTGAGTTCACATTTTGAGT CTCTTTCTTTGCAAACCCTAACTTATCCATCAATACACCTGGCAATCTGGGGTCTTTCCTTCCTGCACCATTTTGTCCTT TCCCTCCAAGTTTTTCTGTTACCCTCTTAAGATTCTTGTGCCATTCCTTGTTTTATCCCTTTATCACTTAGAAAGTAATT AACTTTGTTTGATCTTTTATCTCTTCTGGTGAATCTTAACTTGTTTCTTCTCCCGAGGAGAAAGGAAACATGATGTCCAC CAATTCAGCTCACTTCTGCTTCTGCAAGACTAGAACACTAATCATTACATTTCCAACATGTTTGAGTATACGGTGAAAGC AAAATTATAGTGGACAATCACAGAAGTAAATAAAATTTGTTTTTGTCATTCGTGATTTTGGTTCATCTTGATTTTGTACC GTGTATTTAAATAAGCACAGTCAGAAGTATAATAGTATTGTTTGAGTGATGAGCCCATTTCTACAAGACTACAACACTGA TCATTACATTTGTAACATGTTTAAATATACGGTGAAAGAAAAATTACTGTGGACAATCACAGAAGCTAGAAGTTGTTTCT GTCCATAATTGACTTTGGTTTCCATGTATCTAAATAAGCATAGTCAGAAGTATAATGGTATTGTTTGAGTGATGAGTTGG GTTGATTTGGGTTTCTCGGGTGTTAATTACAGCTTACTGGAGAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCAT CAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTTCGTACAATACTAGCTACTTATTCTT TGAGACATTTATGCATATACCTTTTATGTATATGAATATTTTCATCACATGATTCTACAATATTATCATTATGCTTATGT TTAATTCACATAAAATTGACATAAAAGCAAGCTTATGTATTAGGACTTCACTTAAAAAGATAAAACAAAACAGTTTTAAG GGATGGGGTATAGACATGTCTGCGGACGAAGTCCGTACATTATCCCAAGAGAATATTTGATCTTGTGCACCACTTAAGAT TAGATGGTGCATCATAATGACAAAAATTTTAGATTAGGTTCCAAAGCAAAAAAACATCAAATCAATTATCCATCAATGCT TAGTGCAACACTAAAACTTTCAATATTACACAACGTGTAATTAATGTTTGATAAGGAAAAAGTTTTGTTGACTTCCACCA GGTCAAATATGAAGAGAAGAGATGAGTAGTGATATGATAGGTAGTGTGATAGAAAATGTAAAAAGATATGGGAAAAAATG AGTACATATGAAATGAAAGGGAAAATAAAGTGTTAATGTATCAAAACTCATTTTATAATCAACAGGGGCGGAAGCATAAA AATTAAACATTAAGCAAAATTAACAATGATTAACTAGAAAATGTAGTATAAAACTTTTAAGTAGGGATGGCAAAACGGGT TAGCCCGCCCTGCCAATAACCCGTCACAAACGGGACGGGTTGGGCTAGCCCGCCAAAAAAGTGGGCTCAAAATCCTAGCC CACCCCGCCAAAGGGCGGGCTAGCGGGCCAGCCCATGGGCCAATATATCAATGAAACAAAAAACAATCATTTTAGTAGAA AAACTTAGAATAATTCTTGTATTATATTTTTTTCTAAATAATAAGAGATAATGCAAATAATAAAAGTGTAACAAAGAATA AAAACAATATTTTTGACAATTGACATAGATACATCTATAAATATATAACAAATAATGCAAATAATAAAAAATTATGAATT ATGAAGCTGCATATCTTATTTTATAGACACAATATATGGGTGTACTATACAATACATAGTTACATACCAAAAAGAAAAAA ACGTGAAGTAGGAAGAGAGAATAAAGTTTTGAATTTGAGAGTGAAAGAAACAACTCATATCAAATTGATAAATTATCAAA CTCAAGAAATAGAAATTTAAAGCTTTTTTTTAGAATCAAACCATATATATATATATATAAGAAAAGTAGCAGGTTGAAAA ACTCATACAATAGAAATATTATATATATAAAAAAAAATAATGAAAGAAGAAAGAAACGGGGGAAGCAATCAGTACAGGGA CATAAAAGAAGGAAGAAAAGAAAAATGCAAAACAGTACAAGAGCCAAGAACACATAGCAAGAGACACGCTGCAGCATAGG AATTATTGCAGATAAAAGGAAAATACAACTGAAAAGATGAAACAAAGTGCAAATAACACTTTGTTGTGGGCTATGGGCAT AGAAGAATTTTTATAAAAAAGAGGAAAAAAAATTTAGCCCAACAACGGCAGCCATACCCCTCACCACACCAGCAAAAAAA ACAAACAAAGCCCGCGGGCCAGCCCGCCCCAGCCCGTTAAATTACGGGCCAAAACGGGGGCGGGCTAACATTTTTTTTGG GCTACATTTTTCAGCCCAACCCGTCCTATAACAGTGGCGGGGCGGGCTGGCCCAACGGGCTGAGCCCATATTGTCATCCC TACTTTTAAGAGGGTGAGTACAAATTTGTACACCATATTCGATTAAGAGTCATTGAATCTTAATTGGGCAAAGGGTGAAA ATACAAATGAAAATAGGTCAGGCTGCCGACAATGATCTAAGGCCTAACCTACATCTGACTCAGACTCAAGTCAGACTAGA CAAATTGGTAATAGATAAGGTCAAAATTTTTAGAAGCCTATTTAGTTCAAAATGTCATACTTAAGTTACTTAGAAAGCCT TATAAATATAACAGATCACCTTATGTCAATAAATATAATTAATGTAGATGTATTTTATCATCTTACAATGGATTTTTTAT GATGTCATAAAATTATATACTTATTAAATTAATTATATGTATAAACATATTAGATTATATAATGATTTAATTATGAAATC TCTTTAGAAAAGATCTGGTGACCTGTTTACTTTAACTAAGACGACATATTTTAGCTCATTAGTTTAAAAGTTTATTGGCA TATTTACAAATAAATTTATCAATCTACTCGAACATCTTATTATAAAATATGCTTATAAAAATGCTATCAGGTCAGACGAA ACCTAAAAGAAAACCTATAATAAGAAATAAGCTGGACTCAAACTTTGAATTTTTTAAATAGCTTAGACCTAATTAAGCAG GTTTAGCCAGTTCTCACTCCTAGGAGAAATAAATTTTGGTTTAACCTAGAAGAGACAATGGAAACATTTTAATCAATTAC CAAGATGGAAGTAAAATATAAATCAAGTGGTCCTGCTCCACTCACTTTTTTTGGGCAATATTGAACCCAAAAATGGATAC ACCCAACACAGAAGTTGATCCTACAGTGCATACCAAACAAATAAACATTAATCTCAGGCCTGCCACTCGCTTGAGCCTAG TTCTGCGCACCAAGGTGGGCTCAGCCCATTGTTATACTGCATTTTTCAGTTATTCAATGAGAACACATTTGTTTGACAAA AAAATATGAGAACACATTTTGGCACAAATGATGTTCTAATATTTTATTAAAATTACCATTTATCTCTCTAATATTTCCTA TTTTAACTCTTTAATTTTCCTGTACTTTTAAGAATTATATTAACGTAAAGGTATAATTGATAAAACACAATTAATGTTCT TTTAAAAGTATAAAAATAATAGATGAATAAAAGTAAAAGATTCTTAAAATAGTGACAAATAAAAAGTAATGGAAAAATAT ATTTCTTAAGTTTGAAACCAATATTTCTTTTTGTGACATTCTTTATGTTCATGAAGGTGGCTATGGGACACTTGAGGAGC TCCTTGAAGTGATAACATGGGCTCAACTTGGAATTCATGATAAACCGGTAAAGTCTCTCCTAAGGCTCCAAATATATTTT AAGCATATTTGGTTCATATTTCTATTTCCATTTTATTTTCAGTTTAAATCATTATAAAAAAGTTTGAAAATAAAAACCAA ATTGACATATACTTTCATGTTTGAAAAAGTTTGAAAAATAGATTGTCATTATGAAAATTGGTGCCATCACTTACCATTTT ATTGGATGATAATGGTTAACAAAAGTTCTGGTTAATTTTGGTAGGTGGGATTGCTGAATGTAGATGGATACTACAATTCC CTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAAC ACCAAAAGAGCTTGTAAAAAAGATGGAGGTAATTTCAATTTTTTCTTTAAGAAAATGA
CDS sequence (LotjaGi3g1v0164600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGCTACAAGGATGCTGC TATTGAGCTTGGAAAGGAATTGGTATCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGA TTTCTCAGGCTGTTTACAATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAAACACTTATGCCAAGAGAGCTTACTGGA GAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTAT TGCCTTACCTGGTGGCTATGGGACACTTGAGGAGCTCCTTGAAGTGATAACATGGGCTCAACTTGGAATTCATGATAAAC CGGTGGGATTGCTGAATGTAGATGGATACTACAATTCCCTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATC AGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAACACCAAAAGAGCTTGTAAAAAAGATGGAGGTAATTTCAATTTT TTCTTTAAGAAAATGA
Protein sequence (LotjaGi3g1v0164600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYNGGRHVIGVIPKTLMPRELTG ETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFI SPTARHIIVSAPTPKELVKKMEVISIFSLRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 182 | 182 | 8.3E-124 | – | |
| PANTHER | 1 | 182 | 182 | 8.3E-124 | – | |
| Gene3D | 1 | 183 | 183 | 4.8E-86 | – | |
| SUPERFAMILY | 4 | 181 | 178 | 5.65E-62 | – | |
| TIGRFAM | 7 | 182 | 176 | 5.6E-63 | ||
| Pfam | 51 | 181 | 131 | 1.0E-46 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0164600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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