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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0166700 |
| Transcript ID | LotjaGi3g1v0166700.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KTI12 like; TAIR: AT1G13870.1 KTI12-like, chromatin associated protein; Swiss-Prot: sp|Q9LMH0|KTI12_ARATH Protein KTI12 homolog; TrEMBL-Plants: tr|I1KIA5|I1KIA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0166700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22751574..22757341) extracted from Lotus japonicus Gifu genome v1.2.
TAAAATTAAGTAAAAAACCATTTTCAGATTCACTTTTTTTTTTAATTTACATTTGAAAATAGAAAACAGAAAAATCCACA ATCGACTTCAACAAGCCCTTAATGAGTTTGGTTTGTATCTTAAAATATCCGAACAAAACAAATCCAATTGAAAATTAGGT TGAATTGGACTAGGTTATCAGGTTGGCATATTATCAATCATTTTTATGTATTAGGTGTTGTGTAAGGTGCACTATCACTT GTATTTTACATTAAAACCCTTTTGTGCCTCAACCTTCTTCCACTTCTTCACCAGCAACCGCCCCTCTGCGGCCATCTCCG ACCAGCCACCCCGGCGTAGGAGTTCTGGCTTCGACGCTTCTTCTATTCCTGATCTGCTTGAGCACACACAAAAACCGCAA TTCATTAGTGTGGTCATATTCACAGGGGCATCAAGGTGGGGGCTAAATTGTAATCTCCATTTTTTTCAACAAGTCACCAA TAGTCCAATACCCATTAGTGTGGGTCTCAACAGAAGGTTCCCAACCATAAGCAAAACCAAATTCCCTAATCCTGGTAGCG TTCCGCCACCATTCTCAGCCACTAAAACCACTAGCAGAAGGAGATTGACGGTGGCGATTCCAGTTCCCTCGGCGAAGGAA AGCGTATGAATGAATCTCTATCTCTCTATCTATTCTATTGCTTGCAGTTTTGTTTGTTTTTGTGATCCACTGCTCAGACC TTTATTCACAAGTAAGACTCTATAACTTCTTAATCTATTGAACCAAGTCATGCTCATTTTTATCTTATCTGACCATGTAC ATGTAAAATATCAATTAATATTCTATGAATCTATTCTTATTTCATCAATAGCACTGTTTTGTTTGAGTTGAAGTTGAATT CTAGTCCCTAGAAAATGGAACATACCACCCAAGGAGGATAGTGTGATTTGTAGAATCTTCATGTTTAGATGGTCTTTGGT GATTGTGTGTCACGCCTTCCAATTTTATTTTTCCATGTCTGATATCACTCTTTGCTACAGAGTTTGGTTTGGGATTTCAG TTGGGGTTACATTTTCTGCTAGATTTGAGGGCCCAGTAGTACTAATTATTGAATGAATGGCTTAAAATTAACTAATTCAG AAGATAATGACTAAGGTGAAACAGATTAAATACAGAATAGCCAAAGTGGAGGGATGATTAGGTTTCTGAGACTTTAGCTA GGAATGTTTGAAATTTAAAATTTTGGTTGTACAGGAAATGAGTGAAGGGCAGAAAGGTTGTTTTACATTCTGTGTATTAC TTTTGCCCTGTTCCCACTGCTCAAAATATCTGTCACTGTATTGAGAGAAGTGAATTGTATATGGGCTGCACTAATTAAAC CTGAGAAATGACAATTTGACCCCTCAACAACTTAAAAAATTAAATTTCAGTATCACTCTCTTCTCGATGGATCAGCTGAG AAACCTAGAGGAGATTTTCCTCACATCCTAGCCCTCTCTCAATCACTGTCGACGAAGGCATCTGCGACGGCGGCAAACCT TCCGACATCGGTAAAGGACGCGTCTGAAACCTAGAACGTTGATTCTCTCTGCTCTGGGAAGAACCCTAGCTCTCACTTTC ACCGAAGACGAAGCAGTGCATAAACTTTGATCGAAGCGAAGCTCTGTATGTTTCGTTTCTGATCTTGTTTCTGCTCTCAG TACCTTTTCTTCTTTGTTTGATGCTCTGTTCAATTTAGTATCAATGATCAAGTTTCAATCTCTGCTCTCAAACTCAGATT ATGGCTTTCTGCTCCAATGTCTGATGCGTTATCAACATCAACCTCTGCTCCATTTTCTGGTTTCTGTTTGAATTTTATTT GATGCTTGGGTTGAATTTTGTCTGGTGCTTTGTTTGTTGGTTTTAGTGTGATGGACTTGTATCTTTGGCTTGCTGGTATT GTCTCATGTTATCTGTTGGTATTGTGATGTTACATAGCTTTATTGTTGATGTCCCTGTGAGCCTGTGATCTGGGTTTGCT ACAATTTGGGGTTCAGAATCTGAAATAAAGAAGCTTCTTATAGTAAGGAATTTTGGTTTAGTTTGGCAAAATTTTAACTG TAGTTGGAGTTTAAATTGAAATAAAGAAGCTGCTCCTAGAAATTTTAACACCATGATCTGGGTATGCTTTTTATTTGTAG TATCAATTTATGGATATTGTGTGGTTTACTTCAAAAGGTTTATAGAAAGATGGAAGTAGAACCATAGGAGTCATCTGTAA TATGTCCCAAAGCAAGGGAGTTTGAAGTGTCACGTGAATAAGGGAAAAAACTAAGACAAATGCAATTCACGGTGTTAAAT AAAAAAAAATTTGTGTAAAGGTTAAGGAAGTGAAATCAAACGAGCACATTAAAAAAGTTGGGAGTCTAGGAGAGGAACAG ATCAGCTGAGAATATGCAAATAGGCCAACCAATATTTTAAAGGCATTTTAAAGCAGTGTGGACATTGAGCATACTAAATG TGTAAGAATTTAAGTTACATCCACACACCACAAAACCTTAAGCCACTTAAGGCAATAGGTGTTTGTGCCCTTTTAACATA TACTATTGTACACGTGCTAATCTACACAATCTGGGACTTCTTTGAGTCACACTTGTGATTCTCTGATAAGATGAATATGT TAAGATGGAACGATGTAAGGGGTGTGATCATTTGTGTGATGTTGCTTCTAAGAGTGGGTCCATTCTTGCTACAACAGGAC ATTCTTGGCCCCACACATGTCCTATTTTGATTCTTGTAGGTTTTGGATTGCCTGACTATTTATTTTTGCATCCATGGATT GAATATGGTTGGTTAATATATTCAATTGAGCTTCTGGTGGGAATGTTTTTGGACTCTAGAAAATGCTTGTACTTGTAGAT TAATTTGATTATCATTCTGTAGTCATTGCTAGTCTATTGGTAAATCATGCTAAACCAAATTTGAGGTCCAATTTTAGAGA ATTCAATGCAAGTACACTCTTTTAACAAAATATTCTCACTTTTGCCCACATCTTGAACTTGGTTTCCTCTATGAGAATTA ACACTGGATCTGCAAATTGGACAGGTGGGTGTCTTTAGAATCCATGTGTCCACACATTAGATTCTTAATTTTAAAATCAA ATTGTTCATTCCTTGGAGTTAGAGAAAACTCATCATCATTACTCATCAGCATTGGAGGTCAATCTATCCATGAACTTGAA AGAACATATTTGAATATGATTTTCTGACTGGTCGAATGAAGAAGAGAGACTACTATTAGTTTTATCTATCCATGAACTTG AAAGAACATATTTGAATATGATTTTCTGACTGGCCGAATGAAGAAGAGAGACTAGTCAGACTACTATTAGTTTTATCTAT CCATGAACTTGAAAGAACATATTTGAATATGATTTTCTGACTGGCCGAATGAAGAAGAGAGACTACTATTAGTTTTATCT ATCCATGAACTTGAAAGAACATATTTGAATATGATTTTCTGACTGGCCGAATGAAGAAGAGAGACTACTATTAGTTTTTA AATTGAGATCTACATTTCCATTTACGTCCACAATATTGAAGTTTTATAAGTTTCTGTTCTGTACAACTGTATTGCAACCC CAATTAGGGCTTCTTCAACTGCATTTCTGTCATTGTCATCATCTTTCTCTAAGACTTCTCCAACTAATTGCATTTCCCCG TAATTTTACATAATTTTAGGGATTGTAATATAGTTGCAATCACAATTTAAAACATGTGCTATGTTGTTTCTCAATTGGTT TCACCCTATGAAGCACGGACACGGATACGATACGGACACGGATACGGCGATACGGCTAAAATCAAAAGAGTAGGATACGG GGATACGACATATATATATATATATATATATATATATATATATATATAAAAACACTCAAAAAATATAGAGAATATGTCAT GTAACATATTATGAAAAGTAGGATATAGGATACATTAACTTAGTTTTTTTTCTAATAGAATAAGTGTCTTTTTTTTTTTA AATATTGGAACATATGGCCACACTTTTTATAATAAATATATTAACTAAATATTATAGTTATTTTTTTCAAAAACTAAACA AGTTTAAAATATTTACCTAGTGTTTTTTTGTTTACCCAATTTGAAAATGTTTTAAAAGAAACAACCCACTTTTAAAAACA CAGCCTATTTGGGCCCCAACTCTTTTTTAGGAATAGCCCAAATACCAAACCCTAATTATGTATCCTTTCTTTTACTTCTG GCCTCTGCCACTGTTCATCATTAGCAGCAGCCGTCAACTACCAGGTGCCTTTTTCTCCCTCTGCCACTTTCTTCTTTCTC CTGCCCCTGCTCCGCCCTGACGAGACCAGGTGCCTTTGTCTTACATGAATATATTGCAGGTTGTTCCCTAGAACTGAGAT CATTTCATCAGCTGAAAACCCAACTACTTTTTCTCCCCAAATGGCACTGGTTGTAATATGTGGACAGCCATGCAGTGGGA AGTCCAAAGCTGCACTTTGTGTGGCTGAAGCTCTCAAAGAATCAGAATCAAAACAGCAGGTGAGGGTCATAGATGAAGCT AGCTTTCATCTAGATCGGAATCAGAGCTATGCTAATATGCCCTCAGAGAAGAATTTAAGAGGGGTGCTCAGGTCAGAAGT AGATAGGACTCTGTCCAAAGATAGCATAATCATAGTAGATTCTTTGAATAGCATCAAGGGTTACAGATACGAGCTATGGT GCCTGGCTCGTGCAGCAGGGATTAGATATTGTGTGATTTACTGTGATGTTGAAGAACCCCATTGTAGAAAATGGAATGAA GAGCGCAGAGAGAAAGGAGAAGCTAATTATGATGATTCAATATTTGAAGATTTGGTTACAAGGTTTGAGAAACCAGATAG AAGAAACCGATGGGATTCCCCTCTATTTGAGTTATGGCCACAGAGAGATGGGATAGAGAAATCTTCCGCTGCCATTGTAG ATGCTATCTCCTACTTAACCAAAAAGGTTGACTCCAAAACTCGGGATGTGAAAATATTACAACCAACTATTGCAACTCAA ACGTCACGTTTTTCAGATGCAAATTCTCTCTATGAGTTGGACAAGGCCACGCAGGAGGTCACAAATGCTATAGTAGAAGC TCAATCAAGTGCTCTTGGTGGGCCACTGAATGGCATTTCTATAGGAAATGACTTGCCTTCAATCAATATTTCAAGATCAG TTGCGCTGCCAGAGCTTCGCAGGATGCGGCGTACCTTCATAAAATTGACAGGGCAAACAAGTTTAAGTGGGCGACCACCT CCTTCTGATGCAGACAGTGCAAAAAGAATGTTTATTGACTACTTGAACAGGGAACTTGGAACTTGTTGAAGAACAATATG CTGTCTTGCTTGCAAGTGAATTTGAAAGCTGCCCTGTTTTCTAGGATTGCATACTAAGCTGCTCTATATTTAGTTAGATA GAGCATATTGTTGAATAAACTGCTTTATCTTCTCTTTGTTTTTTAAATTCCCTCTTAGCTTCAATGTACCATCATTTGAC TGTCTTTTCCAATTCAAGCTGTGAAGTAAAGATGATAACATAGTTCTCTTGTCAGAGGCTCAGAGCATGTCCTTTGTGAT ATCTCATTTATCAACATCTCTTGTTTTGTTCTTAAGAAAGCTGAGTTGATCTAAGTATATTTGTACACTTCCTCTCCAGG GCTAAATAAAAAGGGGTATTTCCCGCAAGTATAGATTTGCAGAGAAATCTATTGAATTGAAAACATTCAAGGTTAAGGAA TGTCAAGA
CDS sequence (LotjaGi3g1v0166700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTGGTTGTAATATGTGGACAGCCATGCAGTGGGAAGTCCAAAGCTGCACTTTGTGTGGCTGAAGCTCTCAAAGA ATCAGAATCAAAACAGCAGGTGAGGGTCATAGATGAAGCTAGCTTTCATCTAGATCGGAATCAGAGCTATGCTAATATGC CCTCAGAGAAGAATTTAAGAGGGGTGCTCAGGTCAGAAGTAGATAGGACTCTGTCCAAAGATAGCATAATCATAGTAGAT TCTTTGAATAGCATCAAGGGTTACAGATACGAGCTATGGTGCCTGGCTCGTGCAGCAGGGATTAGATATTGTGTGATTTA CTGTGATGTTGAAGAACCCCATTGTAGAAAATGGAATGAAGAGCGCAGAGAGAAAGGAGAAGCTAATTATGATGATTCAA TATTTGAAGATTTGGTTACAAGGTTTGAGAAACCAGATAGAAGAAACCGATGGGATTCCCCTCTATTTGAGTTATGGCCA CAGAGAGATGGGATAGAGAAATCTTCCGCTGCCATTGTAGATGCTATCTCCTACTTAACCAAAAAGGTTGACTCCAAAAC TCGGGATGTGAAAATATTACAACCAACTATTGCAACTCAAACGTCACGTTTTTCAGATGCAAATTCTCTCTATGAGTTGG ACAAGGCCACGCAGGAGGTCACAAATGCTATAGTAGAAGCTCAATCAAGTGCTCTTGGTGGGCCACTGAATGGCATTTCT ATAGGAAATGACTTGCCTTCAATCAATATTTCAAGATCAGTTGCGCTGCCAGAGCTTCGCAGGATGCGGCGTACCTTCAT AAAATTGACAGGGCAAACAAGTTTAAGTGGGCGACCACCTCCTTCTGATGCAGACAGTGCAAAAAGAATGTTTATTGACT ACTTGAACAGGGAACTTGGAACTTGTTGA
Protein sequence (LotjaGi3g1v0166700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALVVICGQPCSGKSKAALCVAEALKESESKQQVRVIDEASFHLDRNQSYANMPSEKNLRGVLRSEVDRTLSKDSIIIVD SLNSIKGYRYELWCLARAAGIRYCVIYCDVEEPHCRKWNEERREKGEANYDDSIFEDLVTRFEKPDRRNRWDSPLFELWP QRDGIEKSSAAIVDAISYLTKKVDSKTRDVKILQPTIATQTSRFSDANSLYELDKATQEVTNAIVEAQSSALGGPLNGIS IGNDLPSINISRSVALPELRRMRRTFIKLTGQTSLSGRPPPSDADSAKRMFIDYLNRELGTC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 189 | 189 | 8.2E-37 | – | |
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| PANTHER | 1 | 300 | 300 | 2.2E-119 | – | |
| Pfam | 1 | 296 | 296 | 4.1E-82 | ||
| SUPERFAMILY | 3 | 149 | 147 | 3.67E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0166700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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