Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0167600 |
| Transcript ID | LotjaGi3g1v0167600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT5G60800.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q9FJH5|HIP3_ARATH Heavy metal-associated isoprenylated plant protein 3; TrEMBL-Plants: tr|A0A0L9TE79|A0A0L9TE79_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0167600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22901739..22904603) extracted from Lotus japonicus Gifu genome v1.2.
TCCAAAATAAGTAGTAAAATGGTGGTAAAAAAAAGGGGGTCCACTAAAAATAGCACAGTTATTATTCTTGTTAACAGTAT AAATTCACCACTCACTTCCCTGGACTCATCAGTTACCATTCCATTTCACCACTACTCTCTGTAACCACCCTCTCCACTCC ACGATGGGTCAGGTTCGTTTCCCTTCACCTCTCTCCTTTATTCTCTTCTTTACATTGCATTGCATTCTTCATTGCTAATA CCAATTCCTCTAAATCATGTCGAAAAAGCAGAACAAAAACAAGAACAACAACAACAACGACAACAATCAAGGAAAGAAGA AGGAGGAGAAGAAGATAACACCCACCACCGTGGTGTTGAAAGTTGACATGCATTGCGACGGTTGCGCTTCCAAAATCGTT CGCTGCGTTCGCGGATTCCAAGGTATAATTTCCCCTTATTCAATCCATTTCATCAATCTCGTTTCAACGCTACATGATTT TTGGATTTTATTTATGTTTTTTGCGTTGATTGATTCGTAACCGAAGCGTTGAAATTGAACCTTCTTGTTGAAGGCGTGGA GAGCTTGACAGCCGACGGCGACGCCGGGAAGCTAACCGTCACCGGCATTGTCGACCCTGTCAAACTCCGGGACAAGCTCG CCGCCAAAACCAAGAAGAACGTCGAGCTCATCTCTCCACTTCCCAACAAGAAGGACAAGGAGAATCAGAATCAGAATCAA AACAATAAGAAATCTGAAGAGAAAAAACCAAAAGAGGTGATTCCATTTCACTTTTGTTTTCACATTCATTCAGTGCTCTG TTTCCTCTGTTTTTTGAGGTTTTGATTTTCGTGGTTGAATAATCGAGCAGCTTCCGGTGACGACGGCGGTGCTGAAGGTG GCGCTGCACTGTCAGGGTTGTATGGAGAGGATCAAGAAGATTGCGTTGAAGACGAAAGGTCGTTTCACCTTTCTGTTCAG TGTTCACTGATTCTGTTTCTCTCTGTTTTTTTGTTGTTGTTGACGGTTGTTTTTTGGTGGTGGGGACAGGGGTTTATGAG GTGGCGATTGATGAGGAGAAGGAGACAGTGACGGTGAAGGGAGCCATGGATGCGAAGGCAGTGGTGGCGAACTTGATGAA GAAGTTGAAGAGGAAGGTGGAGGTGGTTCAACCAAAGAAGGAGAAGGAAGGTGGTGGTGAAAAAGGAGACGGTGGTAAGA AGAAACAGAAGGGTGAGGAGGAGGAGGGTGGTGGCAAGGGGAAACCGGAGCATCAGAAGCAGAACAAGATGGTGGATTGG GCACCTGTTTATGGATATGGGCCTTACTGGTATGGCGGCGATGGTGATCACCACTACATGGGGCCATTGCACGCGCCGCA GATCTTCAGTGATGAGAATCCAAACGCGTGTTCTGTTATGTGAGTATGGAAAAAGGTTCATGAATCTGGCATTGCAGGAA TTGATTTTGCTTTTGGGCACAGTTCTTCTTTTTTTTGTCTCTTGTTAACACATAGGTGAATTGTGTGCTTGATAGAAAAA GGGTGGGTTTTGTTATCTGATTAACTGATATGATACTAATTTGAGTAGTGAGTGTTAGGTGTTATGGTGTCTACTGTCCA ATGCATGATGTAAATGACAAAAATGAAATATATTTCCCACTTTAGCAGCTACTTTTTGTTACAAATCAGAATCAAATTGA TTTGCAATTGCAAATTCTCATATGCTATGGCTATGCTATGATGTTGTTGGCTATATAACCTTTCATTGTACCTATATGAT TTGTATTTTTTGTCCTATTCATATCCATTCCTTCATGCCTGCCACATTCGTTAGTGGAACTTGAACCTGCCATGAGGATG AGGATGGAGGAAGGGAAATAGGGTCAGTTAGTACACTGCTCATTTTTTAACCTTTGCTACCAATTTTGTCCCTTTCCACC TACCCTTCAACTCTGCTACAAGAAATACTATTGGCTAATTTTGGGGTCTGATTATTGGTGCGTTGTTGAGGGGTTGAGGC AATGAGAAAACGTTTGGGGTATAAACAGTACTACTATAGCGATTCAGTTGCGTGGTCTGTTTCTGCATATAAAAGGCAAA GCAGGGTAATCAGGAATAAACCGTGGCACGGAAAAAAGTAACATAATTGGTACAAATTCGTAGAAGTGGGATTCTCATCT TGGCCACAACTTTGAATAATCATGGTGATATGATCGTTTCAAAATTTTCAGTCAAGGTGTAATTAATTAATTGATTGGAG TTTATGATCAAGTAACCAAAGTGATAAATAGGGACAATTTATGATGGTGTTTCGCATATAGAATCAATTTTGTTCACATA AATTCCCTAGGTAACCGAACAAGACCAGTTGATTCGTTGGTGGCATGATCAACTTTGAAAATTGGTATGGAAGATGATGA ATTTTAAGTAGATCCCCTTTAGAGGTGATGAATTTAATGCTTTTAGACAGTTATAGATGAAATTCAGGCATTGTCTCTGA GTAAAGATGTAGTTTTGGGGTGAACTCAATATCAGTTTTGGGGTGCATTCAATTGGCATTGTTACAATTGTTAATTTGTT ATTAATCTTCAGCCCCACTTTCTTAAGCTGGCATAACATAACTGTGGTCCTATTGAGCTGGGATCTTAAACTGTGATCTA TCTTCTCTCTGGCTGAAGTAATGCCCCAGCTTTGATGGCATTTATGAAACTTCAAGCTATACCCGGTTCCCACAATTGCA ATCCAAAACCACCGGTTAATTCACACTACTACTACATGAGAGTTTTGAATTTGATGTTTAATTACAACTTGTAATGTGGA ATAAGGGCCGTACATAAAAGGGTTTTGAATTTGGTACATTTGGTATATAATTTGTACTCTCTCCG
CDS sequence (LotjaGi3g1v0167600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCAGAACAAAAACAAGAACAACAACAACAACGACAACAATCAAGGAAAGAAGAAGGAGGAGAAGAAGATAACACC CACCACCGTGGTGTTGAAAGTTGACATGCATTGCGACGGTTGCGCTTCCAAAATCGTTCGCTGCGTTCGCGGATTCCAAG CGTTGAAATTGAACCTTCTTGTTGAAGGCGTGGAGAGCTTGACAGCCGACGGCGACGCCGGGAAGCTAACCGTCACCGGC ATTGTCGACCCTGTCAAACTCCGGGACAAGCTCGCCGCCAAAACCAAGAAGAACGTCGAGCTCATCTCTCCACTTCCCAA CAAGAAGGACAAGGAGAATCAGAATCAGAATCAAAACAATAAGAAATCTGAAGAGAAAAAACCAAAAGAGCTTCCGGTGA CGACGGCGGTGCTGAAGGTGGCGCTGCACTGTCAGGGTTGTATGGAGAGGATCAAGAAGATTGCGTTGAAGACGAAAGGG GTTTATGAGGTGGCGATTGATGAGGAGAAGGAGACAGTGACGGTGAAGGGAGCCATGGATGCGAAGGCAGTGGTGGCGAA CTTGATGAAGAAGTTGAAGAGGAAGGTGGAGGTGGTTCAACCAAAGAAGGAGAAGGAAGGTGGTGGTGAAAAAGGAGACG GTGGTAAGAAGAAACAGAAGGGTGAGGAGGAGGAGGGTGGTGGCAAGGGGAAACCGGAGCATCAGAAGCAGAACAAGATG GTGGATTGGGCACCTGTTTATGGATATGGGCCTTACTGGTATGGCGGCGATGGTGATCACCACTACATGGGGCCATTGCA CGCGCCGCAGATCTTCAGTGATGAGAATCCAAACGCGTGTTCTGTTATGTGA
Protein sequence (LotjaGi3g1v0167600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQNKNKNNNNNDNNQGKKKEEKKITPTTVVLKVDMHCDGCASKIVRCVRGFQALKLNLLVEGVESLTADGDAGKLTVTG IVDPVKLRDKLAAKTKKNVELISPLPNKKDKENQNQNQNNKKSEEKKPKELPVTTAVLKVALHCQGCMERIKKIALKTKG VYEVAIDEEKETVTVKGAMDAKAVVANLMKKLKRKVEVVQPKKEKEGGGEKGDGGKKKQKGEEEEGGGKGKPEHQKQNKM VDWAPVYGYGPYWYGGDGDHHYMGPLHAPQIFSDENPNACSVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 283 | 283 | 2.3E-95 | – | |
| PANTHER | 1 | 283 | 283 | 2.3E-95 | – | |
| SUPERFAMILY | 26 | 97 | 72 | 1.44E-7 | ||
| Gene3D | 26 | 103 | 78 | 2.9E-15 | – | |
| CDD | 31 | 93 | 63 | 0.00124754 | ||
| MobiDBLite | 98 | 130 | 33 | - | – | |
| MobiDBLite | 114 | 130 | 17 | - | – | |
| Gene3D | 133 | 200 | 68 | 3.1E-14 | – | |
| SUPERFAMILY | 133 | 196 | 64 | 5.63E-10 | ||
| CDD | 137 | 177 | 41 | 1.19643E-4 | ||
| Pfam | 138 | 197 | 60 | 3.1E-9 | ||
| MobiDBLite | 199 | 239 | 41 | - | – | |
| MobiDBLite | 199 | 238 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0167600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…