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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0173500 |
| Transcript ID | LotjaGi3g1v0173500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT2G27810.1 nucleobase-ascorbate transporter 12; Swiss-Prot: sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12; TrEMBL-Plants: tr|V7AGH0|V7AGH0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0173500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24036257..24043141) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCCGGCTCCGATCCCAAATCTCGCCCACGGCCGGGACCATGGCCGCCGGCACCGGCACCGGTAGCAAAGGCAATGCC ACCGCCTTCTTCTTCCTGGGCGAAGAAAACCGGCTTCAAACCCAAACTCTCCGGCGAGACCAATGCCGGAGACTCAGGCC AGATAAGTCTGCCGCCGAAGCCTGACGCGAGCACGGATCTCGAAGCTGGTCGGGTTCCTGTTCCTGTTCCTCCGCCGCCG CAGGCGGTGAACGGCGTGGGTAAAGTTCCGCCGCTTCCACCTTCGAAGGATCAGGTGGCGAAGAAGCGCAGGGACTCCGA TGGAGTTCCCACTACCAATGGCCAGGTGACGGTTGAGCAGCTGCCACCGCCGCCGCGGAGAGCGGCGAGGAATGAGGATG TTGGTGGTGCGTTGCCGCTGAGTGTGGATGACGATGGCTTCGTGTCTAGACATTCGCATATGAAGTATGAGCTCAGAGAT TCACCTGGTTTAGGTAAGAGTAAGAGTAAGACTAAGAAGAAACATGCTTATTGAGAATTGAAATTTTGATGAACACTGAT GATTTTTGTTTGTTGTTACTGCTTCAGTTCCTATTGGTATATACGGCATTCAGCATTATGTTTCGATATTAGGTTCGTTG ATTCTCATTCCGCTTGTCATTGTTCCTGCCATGGGAGGAAATCATGTGAGTGATTCCTGATTTAATTATTTTTGTGGGGG TGGTGTTTATGCTTGTTTGATAGCAAATTATTATGTGGGGTACTGTTATCTGATGAGTTAGTGGGTATAGGATGATACTT CTGCGGTGGTTTCAACAGTGATGTTCGTGTCGGGAGTGACTACACTCTTGCATACTACATTTGGGACCAGGTTGCCCTTG ATTCAGGGACCTTCTTTTGTTTATCTAGCTCCAGCTTTGGCGATCATCAACTCCCAGGAATTTCAAGGATTAAACGAAAA TGTGTGTATTTCTTCTCATTTCTTTATGATGTCAATTGTTGTCTAACATCATTATGGTTCTGATCAACCCAAACTTTCTG TCTTGCGGTGGTTTTGTTCAGAAAATTTTTAATGGTATAATTTAACCTAAGACTGCTGACCCAAGTTTCTATTTCAATTT TCAGAAATTCAAGCATATAATGAAGGTGCTGCAGGGAGCTATAATTATTGGATCAGCTTTTCAAACTTTACTTGGGTATA CTGGACTTATGTCGCTGTTAGTAAGGTATGATTCTGAGATTTTCTCTGCCTGTTAATTAGTACACACTCCCTTGTTTGAT CGGACAGCTTTTATTCTTGTGCACTGAAACAATGTGTAAGGACTAAGGAGTGCTAACTGCTAATGATGAGAGATTCAAGT AAAATAATATAAGAGATGATTCTGGGAAGAAGAATAGTGTGGATAAAAGCGATAGGGAAATATAATATTGCATAGTGCTT TAAACTATAAAAAACAATAAGGAAATTGCTAAACAATACGAAACTATGTTTACCAAAACGCAAGAATCCAACGCGGCTTC AACTCACTTCCCTTTAGTTTTGTAACCGCACCCACCTATTTTTTTTTATCAAGATTTTGATTGGTTATGCATTGCTTTGT TGTATTTTCGTCTCAGAATGTGTTGTAATTTTTAGCACTGCTCAAACAGTAAATAGTGCGGGTGCATGAAAGTTAATGTA ATTTTTTGCTTTACCTTTCACATTCGACTTTTCAGGTTGATCAATCCCGTGGTTGTATCCCCAACTATTGCTGCAGTCGG ACTTTCATTTTACAGTTACGGTTTTCCACTAGTGGGTACATGTCTTGAGATCGGAGCAATACAGATATTAGTGGCTATTT TTTTTTCTCTTGTAAGTTTGTTCATTTCAAATTCCCACTGTATATATGATATTGATCATTGCACTGTGCTAACTGTTAAC ATAATTTGTACTTCCTTGCATTCTGCAGTATCTTCGTAAGATATCTGTTCTTGGACACCGCATATTTCTAATATATGCAG TAAGTTTAATGTTACAATATACTTCTTAGTTACTCTTCAGTAGTTGATATAAAATTCTGCATTGTAGCAAATGATTTCTG TTAAATGTGATGTTTTCATAACTTAACTGCCAGGTTCCTTTGGGTCTAGCTATTACATGGGCAGCAGCCTTCTTGCTCAC TGAAGCTGGAGCCTACAACTACAAAGGGTGTGACATCAGCATACCTGCCTCAAATATGGTTTCAGAACACTGCAGAAAGC ACATATCAAGGATGAGGCATTGTCGAGTTGATACATCTCGTGCATTGAAATCATCCCCATGGTTTAGATTTCCTTATCCA CTACAATGGGGTACTCCTGCCTTCCACTGGAAAATGGCTCTTGTGATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTC GGTTAGCTTCTTGTCCATTTTTAACTTTGTTTCCTGGACTGTATTATTTATCTGGCTTCTGAACATGTTGATAATTTAAC TTGATTGTGTTCAGTCGGAAAAAGTGACCATCTACTGGGCCTCTTGTCATCTTTACAATGTGCTTGCAATATTATGTGTC AAAAGCTGTTCTCTTTTTTAGGTACGATACAAACTTTAATGAAAATTATGAATTTAGACCTAAGAAAACTATATATGTTT AATGAATGATAGCTTGCATGCTGAAATAAGAAGTTAATGACTATTGTCATTTCATTTTAAATTCAACCTTTGAGATTGAA GGGTAAAAATCAGAGGGAAGAGACTGGGGGTAGGCATATGGTTTATCAGATCCAAGGCTAAAAGTAATGGCTGCAAACTT GTCTTAACGTTCTCAAGTGATCAGGTTAAAATTCTTTTCTGTTTTTGGGTGCAAGTAGATATCGATGAGTGATGTAGTAT GAGTTCTAACTCAGCTTAGGAAATAAGGGCATCAATAACACTGATTGTGTATTTACTAAAATAAAATTTTAACACTTCAA TAATTGTGTATTTTACCACTGATTGTGTATTTATTTTTGAAGATACTGTCTAGATAAGTGAAAAATGGCATGCTCTAATC TATGAGAGATTAACAACATGCAATATCAAAATTGAAATATCTTATTAATGAATTTTCTCTATAAGCTGGGTCTATAATTG ATCTACAATGTTGTTGACATTCATTTATTTTTACACTTTGTAGGTTGGCTCATATCATGCATCTTCATTATTGGTAGCAT CCAGACCTCCAACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTAGAAGGTCTTTGTAGTGTCTTGGCTGGTCTCTGGGGT ACTGGTACTGGGTCTTCAACTTTGACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCAGAGCAGTACA ACTGGGTGCATGCTTTCTGATAGTGTTGTCTCTTGTGGGTAAGTATCTATTATATTTGCATTGTTTCATCTACATTCATC AGTCTATCTTATGATAGCCTTGAAGGAAGTACATTTATTGAGACATTGGAGATGGAAAACCATTTATGTCCGGATTTTAC CCTTTTAGAACAATTAGCAATGCATATGATGCCTGTAAGCACCATCTCTAGAACTAGGCCTTTCTGAAGAAGGAGAGGCA TTACACTAAATTATTACATTTACATCAATCTCATTGTGGTATCAAATTGAAATCTTAGTTTTAATTATTATCCCTGAGAA ATCAGACTTATGATGCTGAACTTTAATAGTTACTGGATTACCGCAATTTGTACTCATTTTAGATTTTGGGTGGATATTTG GGTGAGGATCGTTTGGTTTTTAGAGGCTTTCCCGCATCTTTATTGTATTTGTTTCCAAATAAAATTCCAAGTTTCAACCC AAAATTTTATTACTTTTAAATTTCAAGGCCATACTCAGAATTTTCACTGCATAAATTGAATGAAGAGAAAGAGTCATGTT AAACCCTTTTGCCATTACTTCATTCTTTCTCATGTTTTCTACCAATGGGGATAAAATACAAGAGTTTGGACTTTGGACTC TTGATCCCTCTGGTAATTTTTATTACAACTTGCAAGTCCCATTTTCAGTTTATAACTCTTGTACTAGGGAAATGTTTGTT CTCAAGTTCTTTTAAGAGTTTGACCTCTTAGAAGTTCAAGAATTTTTGTGATATAAGATATTATTAGTAGATTTAGTACA AATTAAATGTTGTGGATTTAAAAGCCTGATATAGGACTTTCCCCTAATGTGCTATGTGTAGTATTGATTTGGAAACAGTG GCCCATTTATTTTTACATTGTTATGCAGCTACTCGTCAATAATCTTTTTGCCAAATCAATGACCCATTGAGTCAGCAGTC ATTCTTTTTTGCCAAAAAGATTCAAAAGCCTGATATAGGTTTTTTCCCCAAATCTTTTTGCCATTCTTTATGGTTTCTAA CTACTTTTGGGTAGCTATTATCACTCAATTTAATGGTTCTGTTAAAAATAAGGAGGCTAAAGTCCTGTCAGTGCACATTT TTTCAGTCCTCTGGGGAATTTGGTTGGGGTGGAATGCTACATTTTCTAGGGCACACCCTTTTTGTGTTGTTTATGGCTGC TTCAGATGAGTTTCAGTCGCCAATTTGCAAAACATCTTGTGACCTTGATACACTCTTGAGCTTCTCTGTTTTCTGGTTTA TTTACTCTTGTTTGGTATATTGTGATCGCAATGAGGTTTGAACCTATTACCTCCTGCAAATTATTCAAGCACCTCCCTAT TCCTAGGGGTTTGGGTTATTTTTTTTTTTCTTTTCAAGCCTTAGTTGCTTCATTATTCTTCTGTTTAGAAACATCTTTTA TAATGGAAAATCTTCAGTATTGCATTATGCTTGATACTTGTTGAACGCAGATGCATCTGTTATTGTTGCCTCGGTACATC ATAGGTTTTTACTGCTGGTTTGTTTCAGGGTGCTTCATAAATCTCTGAAGGAGAACTCTAGTAATAGAACTGTTGGCTAC TTGCTGTTTGAAGTCTTGAACCTATCCTACCTTGAATTTCTCTGTTTAAGTTGTATGTCTGGAAGTAGTTTATAAATTTG TTTGGTATATAGAAGTGGTTATACGGTAACAATTTTATCATCAACCTTCATGGAATAAAATAAGGAGCTGATTGTCTATT TTTTGGCACTTGATGAATAATTGGATAATAAGGATATGCAAATTTATTCCTTGATTACTAGATTGTAGATTGCTGACTTC TTCTGTGATACCCATTTATAAATCTTATTCTCTCTAATGTTGAATTTTTTTATCGCTAATTTAACACCTTTAATTTCACT TACCGTGTAACAGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTG GGCAATGCTTACAGCATTGGGCTTGTCAAATCTACGCTACAGTGAGGCCGGAAGCTCCCGCAATATCATCATAATTGGTT TATCATTGTTTTTTTCTCTATCCATACCTGCCTACTTTCAACAATACGGCATCTCTCCAAATTCCAACTTGTCAGTGCCA AGTTATTTTCAGCCTTACATTGTGGCTTCTCATGGGCCTTTCCGCAGCAAATACGGAGGGGTATGTCTTGTGTCATGCCC TTTTACTATTTTAAACCTTGTGCATGATTTTGATGACATTAAAATTAAATGTTGTAATCGAAATTTGTCAATCACCATTA AACTTCAGAAAAGATTACCCAAAAAAAATAGAGAGAAGAGAGCCCACTTTCATTTGTCAGGGTAGGTTTTGCCACGTAAA CCACTTCATGGCTTCTCTATCTTCATTAGTTTGAAAATAAATAGAAACTACCCTCATATTCAATACTGACATAGTTAGAG TTGCTTGCATACATATTTAAGACCATTTGTCTACATCTACTTGGTTTTCATGATTTCTGCTTTGTATCTTCAGCATTTTT TTTGACAGATTTCTGCATGTTATTTCATGGCTACCAACTACTGCTTTCCCTTGATATGTTTTACACTTGGATGTTGGTGA AAAATTGCTGTGCTTTCCCAATACCTTGTTCCAGTTGTAAGGGAGAGAATTTTATCCTGTTGGTTGATATGTCACTGATA CGGACCCAAGTATTAATAGGCCTTAGTAAGGTGTATGTATGGAGGGGTTAGAAGACGGATTACACACTAGTGTTACTCTC TTGGCTCATGTGGCAGTACCTTTAGAAGTCGCAAGGTGTGTGAATGAAAGAGTGCTGAGGTAGAAGGTATAATCGTGACT TGGAGAGAACGGGATGAGATGGTATTCAGTTGGGTTGGGAGGTAAAGGAAGTCTGTATCTTTCAACCGAACTGAATTGCC GCCTATCTCACTGTCTCTGTAGTCACACGGTTATACCCTCTCCTACCTCAGCACTCTCATTCACGCACACCTTGCACCTC CTAATGCTACTGTCACATTAGCCTATGCAGTGACACTAGTGGAATTAGGTCTATTCCCTCTTCTGCCCCTCCTTACATCC ATACACCTTAGTAATTCTTAGCCTATTAATTCTTGAGTCGGTATCATTCACAAAATTTGGCTTTTGACCAAGTGCAATGG TGTAATATGATCCAGAAAGTGTACCACTCTTAGCAGAACAAGACTTTTGTTGTTGATGTCAGGTTTTTCTTAAATAACAC TTGCGAATCTGTTCTTTTTGCAGTTAAATTATTTCCTAAACACGATTTTCTCACTACACATGGTGATCGCTTTTCTTGTC GCTGTTATCTTGGATAATACTGTACCTGGTAGTAAGCAGGAACGTGGGGTATATGTTTGGTCAGAACCTGATGTTGCTAG AAGGGAGCCTGCTGTTGCGAATGACTATGAGTTGCCCTTGAGGGTTGGTAAGATTTTCCGATGGGTGAAGTGGGTTGGCC TGTGA
CDS sequence (LotjaGi3g1v0173500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCGGCTCCGATCCCAAATCTCGCCCACGGCCGGGACCATGGCCGCCGGCACCGGCACCGGTAGCAAAGGCAATGCC ACCGCCTTCTTCTTCCTGGGCGAAGAAAACCGGCTTCAAACCCAAACTCTCCGGCGAGACCAATGCCGGAGACTCAGGCC AGATAAGTCTGCCGCCGAAGCCTGACGCGAGCACGGATCTCGAAGCTGGTCGGGTTCCTGTTCCTGTTCCTCCGCCGCCG CAGGCGGTGAACGGCGTGGGTAAAGTTCCGCCGCTTCCACCTTCGAAGGATCAGGTGGCGAAGAAGCGCAGGGACTCCGA TGGAGTTCCCACTACCAATGGCCAGGTGACGGTTGAGCAGCTGCCACCGCCGCCGCGGAGAGCGGCGAGGAATGAGGATG TTGGTGGTGCGTTGCCGCTGAGTGTGGATGACGATGGCTTCGTGTCTAGACATTCGCATATGAAGTATGAGCTCAGAGAT TCACCTGGTTTAGAAATTCAAGCATATAATGAAGGTGCTGCAGGGAGCTATAATTATTGGATCAGCTTTTCAAACTTTAC TTGGGTATACTGGACTTATGTCGCTGTTAGTAAGTATCTTCGTAAGATATCTGTTCTTGGACACCGCATATTTCTAATAT ATGCAGTTCCTTTGGGTCTAGCTATTACATGGGCAGCAGCCTTCTTGCTCACTGAAGCTGGAGCCTACAACTACAAAGGG TGTGACATCAGCATACCTGCCTCAAATATGGTTTCAGAACACTGCAGAAAGCACATATCAAGGATGAGGCATTGTCGAGT TGATACATCTCGTGCATTGAAATCATCCCCATGGTTTAGATTTCCTTATCCACTACAATGGGGTACTCCTGCCTTCCACT GGAAAATGGCTCTTGTGATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTGGCTCATATCATGCATCTTCATTA TTGGTAGCATCCAGACCTCCAACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTAGAAGGTCTTTGTAGTGTCTTGGCTGG TCTCTGGGGTACTGGTACTGGGTCTTCAACTTTGACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCA GAGCAGTACAACTGGGTGCATGCTTTCTGATAGTGTTGTCTCTTGTGGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCT GAAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTTACAGCATTGGGCTTGTCAAATCTACGCTACAGTGA GGCCGGAAGCTCCCGCAATATCATCATAATTGGTTTATCATTGTTTTTTTCTCTATCCATACCTGCCTACTTTCAACAAT ACGGCATCTCTCCAAATTCCAACTTGTCAGTGCCAAGTTATTTTCAGCCTTACATTGTGGCTTCTCATGGGCCTTTCCGC AGCAAATACGGAGGGTTAAATTATTTCCTAAACACGATTTTCTCACTACACATGGTGATCGCTTTTCTTGTCGCTGTTAT CTTGGATAATACTGTACCTGGTAGTAAGCAGGAACGTGGGGTATATGTTTGGTCAGAACCTGATGTTGCTAGAAGGGAGC CTGCTGTTGCGAATGACTATGAGTTGCCCTTGAGGGTTGGTAAGATTTTCCGATGGGTGAAGTGGGTTGGCCTGTGA
Protein sequence (LotjaGi3g1v0173500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGSDPKSRPRPGPWPPAPAPVAKAMPPPSSSWAKKTGFKPKLSGETNAGDSGQISLPPKPDASTDLEAGRVPVPVPPPP QAVNGVGKVPPLPPSKDQVAKKRRDSDGVPTTNGQVTVEQLPPPPRRAARNEDVGGALPLSVDDDGFVSRHSHMKYELRD SPGLEIQAYNEGAAGSYNYWISFSNFTWVYWTYVAVSKYLRKISVLGHRIFLIYAVPLGLAITWAAAFLLTEAGAYNYKG CDISIPASNMVSEHCRKHISRMRHCRVDTSRALKSSPWFRFPYPLQWGTPAFHWKMALVMCVVSLISSVDSVGSYHASSL LVASRPPTPGVLSRGIGLEGLCSVLAGLWGTGTGSSTLTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIP EVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVASHGPFR SKYGGLNYFLNTIFSLHMVIAFLVAVILDNTVPGSKQERGVYVWSEPDVARREPAVANDYELPLRVGKIFRWVKWVGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 134 | 134 | - | – | |
| Phobius | 1 | 210 | 210 | - | – | |
| MobiDBLite | 9 | 26 | 18 | - | – | |
| MobiDBLite | 72 | 87 | 16 | - | – | |
| PANTHER | 81 | 166 | 86 | 4.0E-254 | – | |
| PANTHER | 81 | 166 | 86 | 4.0E-254 | – | |
| TMHMM | 176 | 195 | 20 | - | – | |
| Pfam | 191 | 451 | 261 | 2.1E-46 | ||
| PANTHER | 194 | 558 | 365 | 4.0E-254 | – | |
| PANTHER | 194 | 558 | 365 | 4.0E-254 | – | |
| TMHMM | 210 | 229 | 20 | - | – | |
| Phobius | 211 | 230 | 20 | - | – | |
| Phobius | 231 | 290 | 60 | - | – | |
| Phobius | 291 | 309 | 19 | - | – | |
| Phobius | 310 | 374 | 65 | - | – | |
| Phobius | 375 | 396 | 22 | - | – | |
| TMHMM | 375 | 397 | 23 | - | – | |
| Phobius | 397 | 401 | 5 | - | – | |
| TMHMM | 402 | 421 | 20 | - | – | |
| Phobius | 402 | 421 | 20 | - | – | |
| Phobius | 422 | 432 | 11 | - | – | |
| Phobius | 433 | 451 | 19 | - | – | |
| TMHMM | 434 | 456 | 23 | - | – | |
| Phobius | 452 | 487 | 36 | - | – | |
| TMHMM | 486 | 508 | 23 | - | – | |
| Phobius | 488 | 508 | 21 | - | – | |
| Phobius | 509 | 558 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0173500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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