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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0176500 |
| Transcript ID | LotjaGi3g1v0176500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor; TAIR: AT3G44460.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1; TrEMBL-Plants: tr|K7M309|K7M309_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0176500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24561959..24564992) extracted from Lotus japonicus Gifu genome v1.2.
TAAGACAAACACTTTAATTTATGATGCAATCCATGGCAGTTACTTTAAGTCTCTCTCCACTCTAGTGTGTATGTGTAATG TATCTATCTTCTCTTCTCTCTCAATTGAGTCCATTCTACACTTCTACTTTTCATTCCTCTCTCTAATTCCAGTTCCAAAT CAATCTTTCTCCATTTCAGAATTCAGACTAGCTCTCTCCCTTGCTGTTTCCCTTCAGGTACTCACACATACATATCTCTT TTTCTTCATTCCTCTGCCATTATGATTTTTGCTATTTTTCTCTCTTTGAAGTTCACATCATATGATTTGGTTTCTCAATT CTCATTCTTTCATGTTGGTCACATTTAGATCCAAGTTTGCATGTTGCATGCAGCATCAGTGTGTGATACAGTGAACCAGT GATGGATTTTTTTCATCCTTGTACAATCAATCACATCATCTTAATTACCTGATAATTAACAATTGTCTATCACACTCTCC ACACTCCACATTGATGTTTTTGTATTTCATATTTAATTTTCATCATTCAGAATTGTATCTGAACTTTTTTTGGGTGATTG TTTCAAATCAAGTTATTGATATTTGATACAGTTCAATTTGTGAAGTTATTTTTGACAGAATGACCCTAGAATCAGAGCAA GAGGTTCCAATGCAAGAACCAGAACCTACATTTCCTCAATTGGGCAAACAGAACTCAATTCTGTCACTTACCCTTGATGA GTTCCAAAGCAAGAGTGGGAGGAGCTTTGGTTCCATGAACATGGATGAATTCCTGGCCAGCATTTGGAACTCAGATGATA ACCAACTCAACAATCCACCACCTGCTCGTGATGAAGTCGCTGAGACGACTCAGAGTAAAAGTGTTGCAATTGCAGCAGAA CACACCATTTCCCAGCAAGGCTCAATCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTGTGGTCTGAGAT CCATAAAGACCACCCACAAAGGAATGAAGCAAACAACAACAATCTTGGAAGAAATGAGACACTTAGGAAGCAACAAACAC TTGGGGAGATAACTTTGGAGGATTTCCTAATAAAAGCTGGGGTAGTACAAGAATCATCATCACTATTCAATTCTACACCT CAACTTAGAACTACAATGCCATCTCAGAATCAGATTGGTAATGCTGCAAGTTATGGATTGAGGCCTGCAATTGGGATAGG ATTTTCTACCCAACATAATATAGGGACCAGTTTAATGTTGTCACAGAATAACAGCCTAGTAGCAATGGATCCCTCTAAAA GTCATGCAGTAGAAAAATGTCAAAGCTTGCCGGAGTCAAGTGGGTGTAATAGAAGCAAGAGGATAATTGATGGTCCTCCT GAAGTGGTATTGGAGCGAAGGCAACGCAGAATGTTGAAAAATCGAGAATCCGCAGCACGTTCTCGAGCTAGGAGACAGGT TCTGTGCTTATCTCATATTCAACTCTATGTTATATTTCAACTTGATAGTTATTAATCATATAACTTAGAGTATTTTCCAA TGCTTCACTTTCCATATAATCAATTCATAGCAATGTTTTCTTCCCATGTTATTTAGATATCAATAATGATTTTTGGACTC ACTTACAGTGTGACACCCTACAGATACCCACAATATTTCTATGCTTTTGCATAGCCGATTGCCCGATTCTAAGTTCGGAT AAAAGAGGAATGTTTTGTTAGGCTTTCGGCAGCGAATGTAAAACTTGCAGATATGTTTAATATGGATATGTGATTCATAT AACTGACCTCACCTAGTGGGTAAAAACTTTGACAACGGTTACTGTTACATTCCAGAAATTAGTTTATAGAATGCAATTTT TGGAGGTGTCTGCTGGTGTTGCACTGTTCGGGTGTGTCCACGAATCATTACTTTCTTGATACCTACCATTCGTCAATTAC CATACATAGTTTCTTGGGACGGTCTTATCCTGCATTCGAGGTCCTATCACTTATGTAAAAATATTTTAATGCAGGCATAC ACAGTAGAGCTAGAAGCAGAGTTGAATCTGCTACAACAAGAGAACGACAACCTAAAAGAAATTCTGGTAGACAATTCACA TTGAAAATTCATGTTCTCATTTTTCTTTCTTTCATTCTTCTATGATTCATGTTTTCTGATGCTTAATTTGTCTTTATCTG AATCTGCAAACTGCAATAGGCTGAAGCCGAGCGTAAGAGAAAACAAGAGGTCAGTGATTACGTTTCAAAGATAATCTGGT CTTGGGTCTTGATATATGCAGGGTTATTAACATTATGGTGTATTTATCATGTGTTGATACAGATTTTACAGAGAAAGCAT TCAACAGCAGCTCAGAAGAGGACAGAAAAATTGAGGGCAATAAAGAGGCCATTAAGCACAACCTGGTGATTAAGAGTGAA AGATAAGAATTAAAAGAAAAAAAATAAGCACACACACATTTGAATGGAGAAAGTAATGTGTCTGTACTCTCCAATATATA CCTCTGTTCAAATTTTCCTCCTTATATCAACTCTTCTTCTTGTACATTCAAAAATAAGAGACTTTGTATTGTGAATGTAG TATGAGTCTGATATCTCACATATGTTAAAAATGAGCTAGATGAATACAATATATTATAAGAGACCTACATACCTAATATC ATAAGGTTTTGAGTGGAGGTTTAATGTCTAGCTCTACTGGTTTATTGTTTCCTTGGCCCAGAGTTCCTTGGGGTCTCCCT GTCTTCCCAACACTCTTTTGAACTGTGTGCTGGAAGAAGCCTGGAACCTGAAAGCCTTAGCAAGAGCCATCCACTTAATG TTAAGTTCTGGTACTTACTTGGAATAATGAGTTAGATGAGTTTGGTGTTTTGATCTAAGAGCTCTGAGTAAAAGAAAAGA AAAAAGTCGATATTTGATAGCTTCTCTATTTTTTGGCTGTTGGTGCTACATTTACAGTTAGCATGGTGTTGTAAGGCCAC ATTTATCTTATTTTTTGAAGGGGGAGGGGGCGCTCATTCTGACATTTATGTTCTGCAATCTTCATTGCTCCCCT
CDS sequence (LotjaGi3g1v0176500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCTAGAATCAGAGCAAGAGGTTCCAATGCAAGAACCAGAACCTACATTTCCTCAATTGGGCAAACAGAACTCAAT TCTGTCACTTACCCTTGATGAGTTCCAAAGCAAGAGTGGGAGGAGCTTTGGTTCCATGAACATGGATGAATTCCTGGCCA GCATTTGGAACTCAGATGATAACCAACTCAACAATCCACCACCTGCTCGTGATGAAGTCGCTGAGACGACTCAGAGTAAA AGTGTTGCAATTGCAGCAGAACACACCATTTCCCAGCAAGGCTCAATCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGT GGATGAAGTGTGGTCTGAGATCCATAAAGACCACCCACAAAGGAATGAAGCAAACAACAACAATCTTGGAAGAAATGAGA CACTTAGGAAGCAACAAACACTTGGGGAGATAACTTTGGAGGATTTCCTAATAAAAGCTGGGGTAGTACAAGAATCATCA TCACTATTCAATTCTACACCTCAACTTAGAACTACAATGCCATCTCAGAATCAGATTGGTAATGCTGCAAGTTATGGATT GAGGCCTGCAATTGGGATAGGATTTTCTACCCAACATAATATAGGGACCAGTTTAATGTTGTCACAGAATAACAGCCTAG TAGCAATGGATCCCTCTAAAAGTCATGCAGTAGAAAAATGTCAAAGCTTGCCGGAGTCAAGTGGGTGTAATAGAAGCAAG AGGATAATTGATGGTCCTCCTGAAGTGGTATTGGAGCGAAGGCAACGCAGAATGTTGAAAAATCGAGAATCCGCAGCACG TTCTCGAGCTAGGAGACAGGCATACACAGTAGAGCTAGAAGCAGAGTTGAATCTGCTACAACAAGAGAACGACAACCTAA AAGAAATTCTGGCTGAAGCCGAGCGTAAGAGAAAACAAGAGATTTTACAGAGAAAGCATTCAACAGCAGCTCAGAAGAGG ACAGAAAAATTGAGGGCAATAAAGAGGCCATTAAGCACAACCTGGTGA
Protein sequence (LotjaGi3g1v0176500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLESEQEVPMQEPEPTFPQLGKQNSILSLTLDEFQSKSGRSFGSMNMDEFLASIWNSDDNQLNNPPPARDEVAETTQSK SVAIAAEHTISQQGSISVPPPICKKTVDEVWSEIHKDHPQRNEANNNNLGRNETLRKQQTLGEITLEDFLIKAGVVQESS SLFNSTPQLRTTMPSQNQIGNAASYGLRPAIGIGFSTQHNIGTSLMLSQNNSLVAMDPSKSHAVEKCQSLPESSGCNRSK RIIDGPPEVVLERRQRRMLKNRESAARSRARRQAYTVELEAELNLLQQENDNLKEILAEAERKRKQEILQRKHSTAAQKR TEKLRAIKRPLSTTW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 12 | 335 | 324 | 1.0E-113 | ||
| PANTHER | 12 | 335 | 324 | 1.0E-113 | – | |
| MobiDBLite | 58 | 77 | 20 | - | – | |
| SMART | 249 | 313 | 65 | 5.9E-9 | ||
| ProSiteProfiles | 251 | 303 | 53 | 10.944 | ||
| Pfam | 253 | 305 | 53 | 2.7E-10 | ||
| Gene3D | 253 | 303 | 51 | 5.5E-13 | – | |
| SUPERFAMILY | 253 | 301 | 49 | 1.69E-9 | – | |
| ProSitePatterns | 256 | 271 | 16 | - | ||
| Coils | 276 | 310 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0176500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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