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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0183300 |
| Transcript ID | LotjaGi3g1v0183300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT5G22080.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|O75937|DNJC8_HUMAN DnaJ homolog subfamily C member 8; TrEMBL-Plants: tr|I1M488|I1M488_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0183300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25694689..25700185) extracted from Lotus japonicus Gifu genome v1.2.
AAACGACATTACATTTGTGCGAGTTACGGCACGAAAAAAAATTAGGGTGGACGGGATAAGAGTAATACAGCGTCGTTTAA GGCGAAAACACTAAACTGTCGTTTACAAGCAAAACTAGCAGAGTTTTATTGTCGTTTTAGTGAATTCTCAGCGAATCTGG TTTTCTTCTTCGCTCACGATCACAAAAAAGAAAGAGCGAAGTTCGGTTTCGAAGCAGAAACTGAATTGCAATCCTTCGCC GTAGCAGCGAGAAATGGGAGAGACAAACGCGGCGGCCACCACCGTCGACGATGATTTGCTTCTCAAAAACTTCTTCGCCG AAGTCAGCGAAGTTGAGAGGGACAACGAAGTCCTCAGGTATCTCCCTCTCTCGCTCGCTCGCTCATATCTCTGTGTTGCG CTATTTGATTTTGTGTTTTCGAACTGTAATTCGCTATTTCTCTCTGTTTTCTGTTTGATTTTTGTTTAATGCATGCGATT TTTGTTGCTATATGTTTTGTTTATGAGATGGTTAGGGTTTTTTGGACTGCGTTGTGTGATTTTTACATCTGATGCTGAAT TTTGTGTTGTTTAATTGAGTGTTAGGTTTAGCATCAAAATTTGAATCGGATAAACGCTGCTTTCTAGCTGAGATCTTTAC ATTATCTGAAAATTGCGTAAATTGCGTTGGTTGAGTGATGTTTCTTCTTTTAAGGCTAGGGATATGTGTTTGAATGGGAT TGGCTTTGTGCTTTTGTTTCCATTGTCGAATTTGAGCTACGCGTAGATGCTTGCTTTTTATGGTCGAAAATTTTGGAAGA AAAATGTAGTTTTGTTTCAAAAATGTACATGTAATTCCTCTCTGCTGATGGACATTACTGTGTTTTTTATGTTCTCCACA GGATTCTGTCTTGTTTTAAGTTAAATCCATTTGAGCATCTAAACCTATCATTTGATTCTTCCATTGATGAAGTGAAAAAG CAGTACCGCAAGGTAATTTCTTCCACCAGCTGAGGGATGTTTTTGTTTTGATTTAACTGTTCTGTTGGACTCTTAGAACA TGGTTTTTTGGATAATCTCTTGTAGATATCTTTGATGGTTCATCCTGACAAATGTAAACATCCACAAGCAAAGGAGGCTT TTGGAGGTACTTGAATACATGCTCTATAATAACTCTGGTCGAACTAAGCATTTTATTTGTTGTTTGTTATTGTTTGTTTC CTGTTTCTTGCACTATTTAGTTACACTATTGTTTAGCACATGATTACTTAGATTAACTGGCTTGTGTAGTTTTATCCTGG AATCTGCCAATTTTCTGCCAATGGGCAAATATGTGAATGAGTTGTATTATATTATATAATAGACGTTGCTTTGACATTGT AATTCAGTAATGGGAGAATTACTTTCAAATATTATCTAGACCATAAAATCTGGCAGGTTAGGAGAGATTTCTTCTTTCCT TGGCATAGGCAGTGGAAGATAGGTTAAAAAAATTCTAAGTAGTTGAGTATGAGGATGTCATGTTTCCCCGCAAATTGTAA ACAGTCCATCAACATAGTTTTGTACTTTATATCCGGTATTAGATAATGTTCTCAATTATTTCTTCATACTATCATCTTTA TCGGCTTGACCAATCCAGTGACATTGTTCTTTCCATGTGTCAAATTATATGCACAATGCCTAAGAAGAAAATTTTAAGAA TCTAAAATTGTTATTTTATGCCATTCATGTTTTATCCTGTTTGGGCACAACTGCAATTGCAGAGTCAGGAAGCAGGATCC AATTTTTAAGTCTCTGTACTGCATGATCACATTTATTCTGCTTGTTTGAAATTTTCTACCATTATGATGTCACAAAGCTT GTTATTTTTCAACACATTGAAGAATGGATATCAACCATGTTGAACATGTCTTAATGCTTGTTTTGCTATTTACTTCAATG CAGCTCTAGCAAAAGCCCAACAATTATTACTCGATCAAAATGAAAGAGATTATCTTCTCAGCCAAGTAAATTCAGCAAAA GGTTTGTGCAAATTTGTCTTTTTTTGCTCGGCATCTAGTCATTGCCTGTCTAAAAGATGCAAATTCTTTCCACTAAGGCT CATATTTGTATCTTTGACTTTAAGAGAAGTTATTCTGAATTATTGTGAAACCGGGTTTGTTGTATCACTCTCATGTCAAA AATAGTATTTTACTCATTATATTCCCAGATTTTCTGCATGTTTGGTTAATGTCAAAAGTTTTTGCTTGTACATCTGCATT AATCTGATTGTGGAATTCTTTTAATGTGTTTTAAACTTGAAAACCTCAATTTCTTTAACTTGGGATCAACCCTTTTGTTG TGTAAAACTTTTTTATTTAATTTCATTTACTTTTTTTCCCTTTTTTTTGGGGCCGGTTTATCTGTGTAGAAGAAAAGGCT CTTTCATGGGAAGCTATGAGCAGATCAAAGAAAAGAACTAATGTTTTTTCCATTTATGTGGACTGCAGAAGAACTTAGAG TAAAGAGGAAAAAGCAGCTGAAGAAAGATACAGCTTCAAAAATGAAGTCTTTGGTTGAAGAGGTATGTGTAGCTTTACTA GGGATTATTTTATAAGGTTTCGCTCTTTGTCACACCAGAATGCACTGCCTAGAATTTTAGAATGCTACCCCCTTTTTATG GTTGTTTCTTTTTGGCTGTTTCTATCATGTCCTCCCTGGTGGATTGGACTTGGATATGTACTGAATAGTGACATTACCAG ACTTGATCTTGTAAAGTTACTATATCATTTTTAATAGAGGCAATGTAGGGTTTTTTAAAATGACCTAATTTATTTCTCTC AGGGAAAATATGATAAACAATATGAACACTCAGAGGAGTTCCAGCAGGAGCTCAAAATCAAAGTTCGGGAACTGTTAACA GAACAAGAATGGAGGAGAAGAAAAATGCAAATGAGGGTATGCTCTAATTGTCCCTACCCACGCACACATGCACACCCAAT CCCCCTTTCCAAATTTTGGTGTCTTTAGAAATGCTAGTGATAAAAAAAAGTGAGATAAATAGGAGACTGTTTACCTATGC AAATTTTGCCAGATAAATATGAGGAGTTTCTGTTCGGTGACCTTTTTCGCTTATTTGGTATTATAGATATCAGAGGAAGA AGGAAGACTAAAAAGGGATGAAGAGGAACAGAAAGAAATGTGGAAAAGAAAGCGTGAACATGAAGAGGAATGGGAAGGAA CAAGAGAAAAGAGGGTGAGTTTTCTATGATTTCACATTTAAACCTCCGTTTATACATCACAGTGCAATTTCTGTTTATTA ATCTTTTAATAGAAGTGAATCATAATTTAACTTACTTTTATGATTCGTGCCTTTGAAATCAGTATTTAAGCTGTAAAGTG TTCCAGATTCCAGAATATAGCCGAAATGATGTTTATGTTCTGCAATGAAGTTTAGTGTCGGTGTAAGTGTGTGGAACCAT ATTGGAGATACTAAAGTGATGAGATAAATGTTTATCAAGCAAAATATTTGAAAAGACGATGCACCACTTCGATCTTTAGT GACACAAAAGAGTATTTGCAAACTAATCTACTTTTCATAGGTACTGATTGGGGTGAAAATACTTGGGGCCTTCGACCATT TTATCTAGATAATAAGGTTGATGGTTCATATTTTGTTGGAATCAAATCTATAAATGATTTTGATGGAAAAGAATAATTGA AGGACATGAAATTGTATCAACGATTCTTGTTGCCATACACCTCTTAAAATTTTAGAGGGTAACCCCTTATGATCTGGTAG TGGTCACTGGTTTCAAGCATGGATGGATGTAGGAGCAGTCTTCCACTTAAGGGGGTAAGAATATATCATTACTTAGCATG GGTAGGTACAAAATAACACTGGCTCTGTATGCAACTGACTCTGTATACCAACACCCAATTAGCTGATAGCTTAAATTGTT AGGGGTAGACTTATCCGATCTTTTCTCCTCTCAAATGACATTTGAAAATGTATAGATCAACTTCGTACATGAATAGTTTT CATATTGCAATTTGATCATCAGTACGAAATGGCAAATTGTCATTTGACCAGCTAACAATAAAGTTAATGAAATGAAACTT GCTTGCTTGCTAGCCATGGTTGCATTTCTTGTTTTCTGTGTTTAATCTGCTTTGTAGTCAATTCTTGTCAGGCCTTTTCA TCACTGGTTTAAAAAATAATCTAATTGATGACTAGGGCCATATCTTTCATGTATGCCACCGTCTTATCAAAAACCCATAT AGCATATTTTGTTGGCGGTGTTTCTTTTTTCAGATCTAGCTCTCCTAAAGTGATGGGTGAACTTCATAAAATAAAGTGTG ATATTATTACTATTCATTAGAAATCAAATGTTGAGATTTCAACAACTTTGTAGTTTGTTATAAATGTAGATGCATTTATC ATGATTTCAAACATTTGTAATTAAACTCCAGATTATTATTAGGATTCAAATTACTTTTCTTATTATTAGAAAATTCTATC CCATGAAAAATATGGATTAAATTAACACAATCACTTCATTATCAGGTATCCAGCTGGAGAGATTTTATGAAGGGTGGAAA GAAGGTGAGATACTAAGCTTACTGTTTTTCATGTTATGAGCAACTATTCGATTAACCCAAACCTTCGAACAAAAGAAATG ATAAATTGCTTAACCAACATTATCTCTTTTGCATGGTTGTAGAATAAAAAAGGAGAAATTCGCCCTCCGAAGCTTAAGAC AGAAGATCCAAACAAATCCTACGTTCAGAGGCCTGTAAAAAGAGGTTAGGGCTTGTGCCATTGTGTTAGAGGATCAAAGG CAATTAATCCAACGAGGAGTGTATCAGTCTGATACTTGTAACCCATATTTTTCACTGCATCCCGAGATGCAGCTTTATGG AATGTAAAACTCCGCCAAATGAATACGCCATTTTGGGATGTTGCATGTATACATAGGAATTATTAAGCTGTATTGCCCTA GTATTTTTTAGTTATAATGTTAAATCCATTTCTGCTAGTTATAGCGCTCAAAGAAATCTATTTAAGTGGGTATGATCAGC GAAGCATTGAGTTAGGTTAGACGTAGGGTTTCTGCATAGTGTCTTTCTGATTTTAGTTACAACGCCAATTTCACCCATGT TGTTCAATGCAAAATGGAAAGTTATAGTGATTACTTACAGTTCGAAAACTTATCTTCTATTTGGGTCCTAGGGATGGTTT TCCTTAAGTGTGGCCACAGCAGATATAGTCAATCCCCAAATTATAAGTCAAGAATGTTTGCGCCAAATCAAGTTCAATAT TTTGTTACTACCATTGTGCATCACAATAGATAGAGAGCTGTGGAAACTATCCTCCTTGAATGATTTTGACTAGATTTCTT TACTAGTCATAAAGCTTTGGTCAACTATCTTTGACAGAAGTTCAAAATCACAGGGCAAGTGGTTCAGATAAACTCTTCTC CAATGAGGCATCTGTTATATATATATATATATATATTAAAGGAAAAGGTCGGAAAAA
CDS sequence (LotjaGi3g1v0183300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGAGACAAACGCGGCGGCCACCACCGTCGACGATGATTTGCTTCTCAAAAACTTCTTCGCCGAAGTCAGCGAAGT TGAGAGGGACAACGAAGTCCTCAGGATTCTGTCTTGTTTTAAGTTAAATCCATTTGAGCATCTAAACCTATCATTTGATT CTTCCATTGATGAAGTGAAAAAGCAGTACCGCAAGATATCTTTGATGGTTCATCCTGACAAATGTAAACATCCACAAGCA AAGGAGGCTTTTGGAGCTCTAGCAAAAGCCCAACAATTATTACTCGATCAAAATGAAAGAGATTATCTTCTCAGCCAAGT AAATTCAGCAAAAGAAGAACTTAGAGTAAAGAGGAAAAAGCAGCTGAAGAAAGATACAGCTTCAAAAATGAAGTCTTTGG TTGAAGAGGGAAAATATGATAAACAATATGAACACTCAGAGGAGTTCCAGCAGGAGCTCAAAATCAAAGTTCGGGAACTG TTAACAGAACAAGAATGGAGGAGAAGAAAAATGCAAATGAGGATATCAGAGGAAGAAGGAAGACTAAAAAGGGATGAAGA GGAACAGAAAGAAATGTGGAAAAGAAAGCGTGAACATGAAGAGGAATGGGAAGGAACAAGAGAAAAGAGGGTATCCAGCT GGAGAGATTTTATGAAGGGTGGAAAGAAGAATAAAAAAGGAGAAATTCGCCCTCCGAAGCTTAAGACAGAAGATCCAAAC AAATCCTACGTTCAGAGGCCTGTAAAAAGAGGTTAG
Protein sequence (LotjaGi3g1v0183300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGETNAAATTVDDDLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEHLNLSFDSSIDEVKKQYRKISLMVHPDKCKHPQA KEAFGALAKAQQLLLDQNERDYLLSQVNSAKEELRVKRKKQLKKDTASKMKSLVEEGKYDKQYEHSEEFQQELKIKVREL LTEQEWRRRKMQMRISEEEGRLKRDEEEQKEMWKRKREHEEEWEGTREKRVSSWRDFMKGGKKNKKGEIRPPKLKTEDPN KSYVQRPVKRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 251 | 246 | 1.7E-143 | – | |
| PANTHER | 6 | 251 | 246 | 1.7E-143 | – | |
| Gene3D | 22 | 102 | 81 | 3.2E-16 | ||
| SUPERFAMILY | 39 | 101 | 63 | 9.29E-18 | ||
| SMART | 42 | 99 | 58 | 1.1E-11 | ||
| ProSiteProfiles | 43 | 99 | 57 | 11.381 | ||
| CDD | 43 | 96 | 54 | 3.54548E-12 | ||
| Pfam | 44 | 100 | 57 | 9.3E-14 | ||
| PRINTS | 45 | 63 | 19 | 2.4E-7 | ||
| PRINTS | 63 | 78 | 16 | 2.4E-7 | ||
| PRINTS | 79 | 99 | 21 | 2.4E-7 | ||
| Coils | 168 | 188 | 21 | - | – | |
| MobiDBLite | 176 | 251 | 76 | - | – | |
| MobiDBLite | 176 | 245 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0183300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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