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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0184700 |
| Transcript ID | LotjaGi3g1v0184700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | YABBY transcription factor; TAIR: AT1G08465.1 Plant-specific transcription factor YABBY family protein; Swiss-Prot: sp|Q9XFB0|YAB2_ARATH Putative axial regulator YABBY 2; TrEMBL-Plants: tr|I3S155|I3S155_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25848436..25857875) extracted from Lotus japonicus Gifu genome v1.2.
AAACATTCCAAGCATTAATATCTCGCCCCCCTCGTCCGCTACAGAAGGCAGTAAGGTTAGAGAAATGGGTCACTCCCACC CACTCATTTTCTCAATCATAACACTTCTCCACTCCCCCACCTTCCTTTCCCCCACTCTCCGCTTCTCTGTCTTTCCCAAA CACGCGCATATCATCACACAAACTCCAAAACTCTTCTCACTTAGTTGGATCCTATAATCCATCTTTTCTTCATAATTCAA TGATCCTCACCCCACATAACTAGTTTTCCCCGACCAGACTAGTCCCATCTTAACCATTCACATTTGATTTTTGTACACAT CCCTCACCTCCTTCTCTCTCTCTCTCTTCCTCCAAGTTAAAAAAAAAATATGAAGTAGTAACATTTTAATATTTATTTTT TAACCTTTATGATTCTCTCTGTCTTAATATATTCTTCTGTAAATCTTTGATCTAGCTAGCTTGTTTCAGTCAGGGAATTC TTCTCCCTATAAATCTAGTAAGCACTCAAACAAAGACAGTACTGCTCTCAACTTAAAACAAGAGAAAATGTCAATGGACA TGATGGGAACCGAGCGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCACTCTCGCGGTATAACTCTCACTTTTCTTC TCTCTCTTTCTCTTGTTTTGTTTTTTCTTCTATGCTTGTTATGTCTTTCATCAGCTAATTTGTCAATAGGGGCTTTCCTA CTATAGATTTCTCGAATTCAGATCATAAAACAGAGAATAAAAAAAGGTCACTTCCCCAAGAAAATTTCTGGACTGTATTG TACTTTAGATCCAGAATTTGACACCTACCTTATATTTTATGAGAAAGTGTAGCTGGGTTTTGTTCCATAAATGTTAATAG CATTTTTTTTTTACCAACTTCTCTTTATTTCGAATCAATTCTGACAACTAGAAACTTCAATACTCACAGATGCTTCTGTC CAGAATTGATTTTGACTTTAGAATCGATTGTTGAAGCATTTACAAACATGCACTAAGAAATTCAGGTGTATGTGGTACCG TGCTAATTTGGCCAGAGGCAAAAGATATAAAAAAAAAAAAAAAAAACTGAATCTGAAACCCAGGAGTACAGCAGCTATCA ACAAATTTTGATCTTTCATTGAGAAAGTAAGGAATGTCCTAATTTGAAGTGTAAGGAAGGAATTTTTTGAGCCTGAATGA AGCAAATCCAAGATGTTTTATATGCAAACAAAATGGATTCACTGGCATAAGAAATTTGAAGGCTATAAATAGGTAGGGAT AGGGCTAGCTACTCCCTGGTATTAGGGTTCTTCTAACATATCCCTTTCTCATAGTTTTTTCAGAAAAATATATAGCATCA TCTGATTATGATCTCATATGCTATATACATAGACTGTTAAAAAGCCTACTTTTGTTGAATTTTCCAATTTTTTTCTTGTT CACTTCTGAACAATAAATCTGTGTATACTGTATAGTTTCTCTCTCCCCCTCTCTCTCTCCTCACAGTCTATTGTATCTGT GATGTGGAACAAGGTGGGTATACTTTTCATCATGATTTGGCAGTGAAGAGTCATTTTTTGATGATCAAGTATTTTCACAA TTTCAGACTTGTTGGTTCCTTTAAGTACAGAGATACTGTCCTCTCTTTCTTTGTATAAGAGCTTGTGGAGGGAGGTTATG ACATGAAGACAAATCCATTTCTGTAACACAAAAATGCTATGCTGTGTTATGTCCTCTCTCTCTCTTCTCCTTTGTTGCCT TTCATCATAAAATCACTGTTGGAATTACTCCTTTTAAGAAAGCATATAGCTTGAAATGTAGATCTTAAACACTGTGCATA AGGAGCAGTGAATTTAATCACACTTTTCTTTCTTTATTCATAGCTCCTTGTGTTGTATGATCTGTTATGTAGCAATAGTG GTTAACGGTGCTTGTTCAAGCTTCATGACCAGCCACTATGGTTTCCGTTCCAGTCAAGTCGTTTTCATGAGCTCTAATTT TCTATCTTTTATCATCTTGCCTTGTTGCGCAGTGTCAGCCAAAAAGTGATGCGCACCAAGTGTTTGTGAGAGTGCTCACT TTTAAATTAGCCTTGTCAGGTTCTGAGTTTTCTGCTGTTAATTAACTTGTATTCAATATGCTGCATTGAGCTCTCTCTCT CTCTCTCTCTCTCAACCTCATTTGTCCTCTTTCTTCTGCTTTCATTTGCAAAGCTAGGTACACCTTTCATGGAAATGAGA TAGTTTCATTAATTACTTCCCCAACATTAATAATATAAGGCCTTGTATTCCGCTATAGTGATGGTCAAGTAAATGGTTGA AAGCAAAATCGCCTCAATAAAATTTAAAACAATATTAATATCATGTTTGTATGCTAGATCAAAGATAGATAATGTGCATA ATTGATTTGTATTTGAAAATTGGTATGTGCAGGTTAGTGTTCCATGCAGCAGTATGCTCACAGTTGTGACAGTTAGATGT GGGCATTGTGCCAATTTGCTATCAGTCAACATGGGAGCTTCACTTCAAACATTACCTCCTCAAGACCCTCAGGTATTTCA GTTCCTTGTTATGGATTATTGCATGATTTATTGTTATGTCTATATCTGGTCAATTTGCACTCCTTTTGTGGGATTTAACT GGTCTGTGATTGTGTGTTTCTCATAATTAAACAGCACTTTCAAGAGCCAAGCAGGAAGGAGCTAGGATCATCTTCAAGAT GCAAAGCATTTGAGCCTGTAAGCCATGAGCAACCTAGGAATATTCCTCCCATTCGCCGTGAGTGCTACACTCTATTTCTC TTCCTGATTTGATTTTAGCTTCTGACATCCATGTCCAGATTGAATTTGATCCTTGGCATGTTCTCTACAGCTCTATCGTG CACAATCATTCTCATTGATGTTTATAATTAAAGGTTAAAATCAATTTAAATTAACAAAATTATGGTTATATGTCTGCTGA AAGGCGGTAGAGGATCCAAATTCTATCCAAATCAGCGTTTTTTTTTCAAAATTAATCATGGTCATACAAAGAAAATTTTC TCCACAATTAATTTTAACTTTAAAATCAATTGTAAATCAATTGTAGAATGATTTTCAAACACCCTTCTAATCTATGCGAT TATGGTCATGAATCTTACCTATCATGTATTTGATGAACAAACCTGGGCAATAAGATGCTAGTAGGCTAGCCTGAACTTTT ATCGTTATGGTCACAGACTGAGACTATATATACTTTGGCAGAAGTTAATTAATGTAAGCAAAGCAGAACAGTGTCATCAT TGAGGCCACTTGTCGTTGAACTGAGTTTTTTTCTTTTTCATGAGAGTGGGCGTTCATGACTCTGAGTATCCGTTTTCTTT TTGGTACAGAAGTACCAAAATTGGCCTTTTATTTTCACAGCAATTTATATGTCCACAACTAGATGGTGACATTACCTAAC AAAATTGACCCCTCCTTAATTGATTGCAATCATGTTGTGCCCTAGAACATATATATCTTGTAACATACACATGTTCATTT TTTTCAATCATTCTTGAATTCTAGAAATAAGTACACTTAGTTCATCTTCATCCACCTCATTTTTCTACCTATTTGTTTTT TTCTCTTCCTATCACATTAGATTATTTATCACATCTTTCATTTATCTCTTTCCTTCATATATCTCTGATTCCCATTTGAG GTGCCAAAGAATACTTTTCTTCTTTTCAATTAAACAAGTTCTAGTTATGTACTCTCTTAAATCAATAATTGACATGTGTC AAAAATACATGCATTTTAAAAAGGGCGGGCTTAACATGCAACTTCCTATGTTTTAATTAAATATAGTAAGAATTTCCATC TCGCTCAACATAATAGGTATAAGTGGGTCCTTAAAGTGTTTATGAAGCGCGAGATGAACACAAGATTTTTAATATGAAAA AAGATTCACATGAGAAAAATCCAAACATCCATATATGAAACATTCTCTTGTTAAAAGTTATAGCTCAACGTGATTTTGGT TGTTGTTAGAAGATCATATTTATTGTTAATATGTGTAAATTTAGTTAAATTGTTGATTTATGGCAATTATGTTTACATTC TATGCAATTTCTTCATTAATTGAAACCATCTTATGAGTATTGCAGCTCCTGAGAAGAGACAACGTGTTCCTTCCGCTTAT AATAGGTTCATTAAGTAAGTAGACTTTCGAACTTGCCTGTTCCCCTATAATCTTTGCATAGTGTATATGTGCATTTTATT ATAATATATGTGGTCTAATGAAGTTTGAACACATAATCAATGATTTATAAACTAGTTAAGCTGGAGAGCTGATTAGAATG GTGATTCAAAATTCAAATAATAATATGATTGGTCTAGTTGAAATAAAAAATTAAATATGTTTAAATAAATAATTTAAATA TGAATAGTAAACAATCATATATATATATATATATACAAATGTAAATACGTATATATAATTTATTTAGCAAATTAAAAGTT GAAAATGATATAGAAACAAAGATAACAATTTTGAAAAAAATATATATGTATTAGAATCTTAATTTGGACATATGTGGTTG ACAATCATTTCATTTTACTAGTTTTATAATTAAGTTATAAAAATCGCTGAAAAAAATAAGTGACATTTGCGAACAAATGT ATATTAAGATGTTTGATAACAGTTTTTGAAAAACTATTTTTTTTTAAACCTGAAAAAATTAAAATTTATTTGTCACAGCC TGTTTTCTAAAATTGAAAGATAAAAATATAAATTGTTTTCAAAAATTGTTTTTGGAAACAATTCATATTTTCATCTTTTA AGACTAAAATACCAAAACAGCTCAGAGATATTTTGTTTTTGTTTTTAATTTTCAAATGATGACCCTTTTATAATTTTGAA AAACATATAATTTAAAGAGTATTTTTCTTTTAAAAAATTGTTCAAAAACAGTTTCTAAAATCAGTTTTTAAATACATAAA ATTAAAATTGCAATCAAACAAGCCTTAAGTATGAAATTCTTCTCAATTGTGATCTTCTTTAATATAATATAAATTCTTTA AAAAAAAAGACTAGAAAATTATGTGGAGCAATTCCAATGTGGACTATGTTAAAAATTCTAACCAAGATAGTTTTTCTTTA TGTTAAATTATAAATTTTATTCAATCAAAAGAAGAAACAAAGTTCAAAAGAACACAAGTTTGAATGCAAGAAAGAGCCAA TCCCTATAACGGTTTTCACTGCTGAAATAAGTTTTTTGAAATTAAAATTTCTTAAATCAACAATGTTACAAGATATATTT GATGAGTTAATTATTTTATCTATTGAAAGCGAAATGTCAGAATTGTTTGATTATAAAACTCAAATAAATGATTGCACATC TAAAAAAACTAGAAGATTAATATAAAAAATTAATAATTTATATAATATATTATCATTCTTGTTAAAAGAAAATAAGTTTA TGATTTTCGCCTTAGGCCTTAAAATATCAATACACCCTAAAGGCTGAATCTATTACATGTATCATATGTATGCATGTGAT GATATCATTCATAAAAACAAATATCAAGTCTTCAAATTTCTGGTTTCAGGGAGGAAATACAAAGAATCAAAGCCAGTAAC CCAGATATCAGCCACAGGGAAGCATTTAGCACAGCAGCCAAAAACGTGAGTTTTTTAACAATTTTCTGGCATATATTATG AATGCATGATGAAATTTCCATATCTATCTTTCAACCTCACATCACATGTGTGGGGATTACTAAACAAGAGATGATTTTGT CGTTTATATGAACCTACCTGGCGAAGATGGCAACCCGACAATTATTGTAGAAACTTTCCCAAGCAAAACAGCAAGCTCCT TTTTCGAGGCTGCAGGTTTTACATTGAAATCGGATTTTATAAAAAAGGCAACTAATCATATCCTCCAATGCCTCCTATAA CGGGGGTTGCTCTTATTTAAGAAACATGCATGCAGAGCTCAGAGTGAAAATTTAACAAAGCCATGGTTTCGCTAGTTAAA GACAAAAGGGAATTGGTTTAACACCACCCTTTTACATATCCATACCAACTTTTTCTGCATTTTTAATTTAAAATTAATTA GTGAAGTATAGTTTTATGTTCTGCACTCATAAATAAGGTGTGCACTTAGTTCCTGCATACATCTGTGCCGTAAATTTAAG TGTCGAGAAAATGAAAAATGATGACATTAAAATCAATTTTCAATAACAAAATAGCAAATAATGGAGGGCAATTCTATGAA AAACCAGTCAATCCATGAATCATATTTTTTCTTCTAACATAATAACAGAGAGACTCTTTTAACTTGTGAATTAATTTTTT TTTTCACTCAAAGCCATAAAGCATGAAAATGAACACAATGGTCAATAGAGCTTGCTCCTAGACATTTGGGTTTGGGCCAC TAATTACAATTCTGGCCACATTTAAACCTTCTTCCCTTTCTCCTCTAAGCTTGCACAAAAACATCTTTGGCCTATCGAAT TTTATTGAAGATACTTCGAACCTGGGAAACAAAGATGTTGTCTTGAAGACCATCAATGAAGATTGTGAACAGACGATCCT CTCTTTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTGGA GCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTGTGG AGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTCTGTTCAATCCTGGACGTGAGGGGGTGTGTTAGA AGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTGGAGCTAGCTTTTGT GGTTGAGTATAGGCCTCCCAATTTCTAATACTCTTTCCCACTTCAAATTTTGATGTATCCTGTGTTCTTGGTGGTTGAGA AAAACTGCTTGCCTCTGGTTTGAACTCCATGATTTGCTATGACAATTGTTGTATGCTTCCCTACCGCCCTTCAGTCATAT TGAGCTCTGCTTCCTACATCGCTCCTCATATTCTCCGACTCATATGAGAGAGATATATGTTCTCAAATTCTATTTTTAAT AAAAAAGTTTGTAAATTAAACTCAGATTTAGCTATCCAAAAAGATGTGTTGTTATACACACACAACACATATATAGCTCA ATAGGTAAAATAATTCACCACAGTTGTTTTTTTTTATAAGCAAATGAATTATATTGAAATGAAGTACAAAGGGTACTTCA ACCTAATATAATAGAGGAGGGCTCAGCTTACACCTTCTAAATCTTACACTCTTACACTCAATCTAAATCATTGATTTCAT TTTAATCCAATGGCTCTAATATGTTTCAATTATTAAAACATCCTATGCACCTTCCTCCTTCTAAATCGATCCTTCTGTTT CCTTCCACAGTTTCCTTGTCGTGCGCTACTCACATCATCATTAATCTGTCTTCCCAGAACCCTCACAGACGATTTCTCAC TTCTGGAAGCCCCTTTTCCTCTGCTGCGAATTTCTATCTGTGTCTTTGATTCAATGCTATTAGAAGGAAACAAAACAGTA GATGGATAGTGGTCAAATGATTGTTTGATCTTATTAATTAATCTTTGAGAAGCCATGGCCTATTTTCTCCTAAGGTTTTT GTCATTTAAACAACGATTATTGATTGGATTAAATCATGGGCAAGGATCTGGAAAAAAAAAATGATAGGCAACCAGAATTT TTTAGAAAGCGACAACCTATAATGTTTGGGAAAAGCCAAGAGGCTTTGATGGATCATATTTTCTGGGAGAAAACAAAGGC GTTTCAATAAAAACTCAATTTGATTGATGAATTGAATTAGAATTTCAGAAACCAAACAATTCTTGGACCTCATAAATGTA GAACGTGAGTGTGGTGCTACACCAGGAAGGATAATGTTTGTTAATGGTGGTGCGCTAGGTTTTAATAATTGAAACATATT AGAGTCATTGGATTAAAATGAAATCAATGATCTAGATTGAGTGTAAGAGTGTAAGATTTAGAAGGTGTAAGCGGAGTCCT CCTCAATATAATAAATTGAATTAAGGTTGTGATTGTGATTATATATTTACACATGATGAATTAAAAAATTTCCTAAATCT CAGCTCCTGGTGTTTTAATCAATAATTGTGACAAAGAGAAGTCAAATCGTATTATAGAGTGAGGTATATCATGATAGGGA CATGCATATATCTTTTATTTTGAAAACATAAGTTTTTATTAGATCGAAAATGATCGATATTACAGACAACACATAACAAT GTGAGTAGAGTCCCCCAATGCTAGTATAGCAAAACCTAAAACCAAACTCGCCCCATAGAGAAATACAATGCAGTAAATCC ATGATCAAGCATTAAACGACCAACAAGAAGAGGCATCCATCGGGGACCTAGAAGTGGCGAGGAGAAGACCTCTCCAACCC AACAAAAATAGAGTCTCATCTCAGCATTAGGGGCATGCATATATCTTTATTATAACCATATTAGATTAGACTAGTGAATG ACATCACATCTTACACAAAAAATCATAACTAGTGAATGACATAACATCTTACACAAAAAATCATAAAATATGGGTGTATG AGTCATTTCACTTATATACTTTCTATTTTAACCCTAAGGGACATAGATATAAGAAGTTGAAATTATGATGCGAGGTTAAG TAAGTGTTCTAATTGATTCATACATTTTGTGCAAGAATTATATATCACAACATAAGTGAGCCAATTTGCATCTTCTTAAA TCAGACACCCCTTCAATGGTCATGAGTCATGACTATATATAGCATCCTTTGGTCCCAATATTGGTTCTTCTTTCTGATTG TCTCATCTGATATATATGAATGCAGTGGGCACATTTTCCTCACATTCACTTTGGGCTAAAGCTTGATGGCAGCAAGCAAG CAAAGCTGGACCAGCAGGGGGATGCTACTCAAAAGTCTAACGGATTATACTGAAAAAATTTGGAAGACTGATTATCAGAT GGTTTTTTCTATGCTTGACCTAAATCAGTGAAAAAGAAAAATGAGGTTGATCAAGTTTCCCTATCATACAACTGGATGGG ACTCTCCTGAAATTCAGCCTTAGACTCTCTCACTCATGTTTAATATAGTATAGTACATGTGTTGGTCTTTAATTTCTATA GTTGCTATGATATGATTGATATTCTAGTGATTGCATTAGTTATCATGTGTTGAACTTAGGAACTTAAGTAAACAATGTAA TAATTAAGCTCCTCCTGTTGTAATAATGAGTCTTTGAAATTTCTCTATTTGGATGATTGGGTCTTAACATATATATCAAA TGATAAATGATTGCATCTTATTAATGTTTATTCTTTTGATGATAAGCAATGAATGTAGCTAGCAAACCCATGTTACTCTC
CDS sequence (LotjaGi3g1v0184700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAATGGACATGATGGGAACCGAGCGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCACTCTCGCGGTTAGTGT TCCATGCAGCAGTATGCTCACAGTTGTGACAGTTAGATGTGGGCATTGTGCCAATTTGCTATCAGTCAACATGGGAGCTT CACTTCAAACATTACCTCCTCAAGACCCTCAGCACTTTCAAGAGCCAAGCAGGAAGGAGCTAGGATCATCTTCAAGATGC AAAGCATTTGAGCCTGTAAGCCATGAGCAACCTAGGAATATTCCTCCCATTCGCCCTCCTGAGAAGAGACAACGTGTTCC TTCCGCTTATAATAGGTTCATTAAGGAGGAAATACAAAGAATCAAAGCCAGTAACCCAGATATCAGCCACAGGGAAGCAT TTAGCACAGCAGCCAAAAACTGGGCACATTTTCCTCACATTCACTTTGGGCTAAAGCTTGATGGCAGCAAGCAAGCAAAG CTGGACCAGCAGGGGGATGCTACTCAAAAGTCTAACGGATTATACTGA
Protein sequence (LotjaGi3g1v0184700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMDMMGTERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTLPPQDPQHFQEPSRKELGSSSRC KAFEPVSHEQPRNIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAK LDQQGDATQKSNGLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 175 | 175 | 3.4E-91 | – | |
| PANTHER | 1 | 175 | 175 | 3.4E-91 | ||
| Pfam | 8 | 151 | 144 | 2.0E-66 | ||
| MobiDBLite | 58 | 106 | 49 | - | – | |
| SUPERFAMILY | 96 | 144 | 49 | 1.83E-8 | ||
| Gene3D | 101 | 171 | 71 | 5.8E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Multicellular organism development | The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). |
Expression pattern of LotjaGi3g1v0184700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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