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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0188300 |
| Transcript ID | LotjaGi3g1v0188300.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G05170.2 Galactosyltransferase family protein; Swiss-Prot: sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2; TrEMBL-Plants: tr|A0A151RMU0|A0A151RMU0_CAJCA Hexosyltransferase; Found in the gene: LotjaGi3g1v0188300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:26857708..26860522) extracted from Lotus japonicus Gifu genome v1.2.
TTGACAGATTCTGATTTCAAGGATGTTTGTGAACTCACTGTGAAACTTGATTTCAATGGCAACTTGTGAGATAGTTACTG TGGTGCTTTTCTAATGAGAAATTTAAATGTGTAAACAGGATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAAC AGCTACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGGTTGTAATTCCAGAATTGTAAGCACTGTTACCTTTCTAATTT TAGTCTTTGATCATGTGCTAGTTATCAATGAAAGTTTGTTTTGAATTCAATGTTTCATTCTATAATGTATAGCATGTTTG GAAAACCTTCTTTCTAAATTCAAAATCAATTTTAAGGAGAAGCTTCTGTGTATAACTTCTGGGTGACAAAATTCATTCTG AGGAAAAAGAAGCAGATCCAAATTAACATGCTTCACATCATATGATTTTTTCTAAGTTAGTGTATTGTTTCTCTTAGTTG CAAGAGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAGTAAGTTACTTATACCATGAT CCTATAGTGTATCTGCTTGTAAGTTATTGTTCATCGCAAAGACGCTTAACTGCATTGAATATAGAACCCTGGACAAGACT ATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCTCCTGTATCAGAAGA TATCAAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTTCAGCAGCCGGAAAA GAAGAGACTCGGTTCGTCAAACATGGATGCCATCAGGTTCATAATTTTTTCCTTGCTTACTAATTGTGTTCTATCATGCT TTGTTACATTTTTTTTCTGTTTACTATTGGCGATGGTTTCTGATGTTGAGTTTTGTGATAACATTGAAAACAGGTGAGAA AAGAAAGAAGCTAGAGGAAGAGAAGGGCATTGTCATCCGCTTTGTAATTGGTCATAGGTAAGTCTCGTCTTTCTTTCAGT GGTTTTATTATTACATAGTTGTCATGCAACTATATCTTGTTTTTATTTTAAATTTATGAATGAATTGTAAAATGAACTTT TTTTTCACTCTTTTCTGCAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATCAGAAGCATGGAGA TTTCCTAAGGCTGGTAATGGTCCTCTTTGTCTTATTGACGCTTCCGGCTCCCATGTCCCTTCTCTCATTTAGTCATTTTG TTAAGACTTGCTACTTTTACTTGACAAGATAACATAACCAAATTTATTTGAAATGAAAAAAAATAAGGTTTTCAAATCAT TTTGTTTTGATTCTGCAGGATCACGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAAGATCTACTTTGCCACTGCTGT TAACTTGTGGGATGCTGAATTCTATATCAAAGTTGATGATGATGTTCATGTAAATATAGGTATGTAATTTTTTCAATCTC ATGATAATCTGACCTTGCATGAGGAGTTGGTGATTCAAACTTAAATTTTTCTGCTCTACATGGTCACTACATAAATTCTC TTTCATATGCATCTTAGAACTCTACATATACTAGACATGGTTTATGTTTCTATATTCTGTATGAATCTTGAATTTTTTTT TTTATGGTAATATGTCTTATTATCCTATTCAATCTGTTTCCAGCTACACTTGGACAAACTTTAGTTAGACACAGAAGAAA ACGGCGGGTTTACATTGGATGTATGAAATCTGGGCCTGTTCTTTCTCAAAAGTGAGAATTATTTTCTTTTATCCATGTTC AATTTAATATAAGAGTTGTTAATTTGTAATACTTTTTCTGGCTTCTTACCTGCCATTCCCAATTTTCTTGCAGAGGGGTA AGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGTACTTCCGTCACGCCACGGGACAGTTGTATGC CATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGTAAGTCCTTCATTGTCTCGCTTATGGGTGGAAATAGTAAA CTGAAGTCAAATTTATGGACTTAATGCTGATGCATGATTTTCTGTCTCAGGAAGGTTCTTCACAAGTATGCCAATGAGGA TGTCTCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACTCTGCTGTGGTACACCACCAG GTGAAGATTTTTTCATTCATTTATAGATAATATTGTTAAGTTCCTACATTGACTCGAGAAATTGCCAAAATACTAAAGGA TAGAGCAATCTTCACTCTTGAGCTAGCTTTTAGGTAGAGTTACGCCTAATCCAAATTCTAAAATGGTATCAGAGCCTATC AAATGTTCAATTCTGCGAACTTTGCGGCTCCAGATGTCTAGCTCTCGTCATGAAGGATGTGTTATGCCAAAGTAGTCCTT ATAAAGGGTAGAAAGATCCTCACCCTGAGCTTGCTTTCGGTCTACAGTTAGATCTTAAACCCAAATTCTAAGAGATATTG ACCTCTGTGAATATACATGTTATCAAATCATTGTATATTTGGTTTGATTAAGGAATAATAAGTGGTCGACAGTTTCAGAT TCTTGAACTTCTTGTTACTCTTGCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGA CCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGG AGTGCCACATTCTAG
CDS sequence (LotjaGi3g1v0188300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAACAGCTACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGG TTGTAATTCCAGAATTTTGCAAGAGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAAA CCCTGGACAAGACTATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCT CCTGTATCAGAAGATATCAAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTT CAGCAGCCGGAAAAGAAGAGACTCGGTTCGTCAAACATGGATGCCATCAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGA AGGGCATTGTCATCCGCTTTGTAATTGGTCATAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGAT CAGAAGCATGGAGATTTCCTAAGGCTGGATCACGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAAGATCTACTTTGC CACTGCTGTTAACTTGTGGGATGCTGAATTCTATATCAAAGTTGATGATGATGTTCATGTAAATATAGCTACACTTGGAC AAACTTTAGTTAGACACAGAAGAAAACGGCGGGTTTACATTGGATGTATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGG GTAAGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGTACTTCCGTCACGCCACGGGACAGTTGTA TGCCATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGAAGGTTCTTCACAAGTATGCCAATGAGGATGTCTCAC TAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACTCTGCTGTGGTACACCACCAGATTGTGAA TGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGACCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGAT CAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGTGCCACATTCTAG
Protein sequence (LotjaGi3g1v0188300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWTIPEPKGLARTTATEAEKLNLVSEGCNSRILQEKEVKRETKGIFKTSNAIQTLDKTISNLEMELAAAKAAQESIRSGA PVSEDIKMPESSGKRRYLMVVGINTAFSSRKRRDSVRQTWMPSGEKRKKLEEEKGIVIRFVIGHSATSGGILDRAIEAED QKHGDFLRLDHVEGYLELSAKTKIYFATAVNLWDAEFYIKVDDDVHVNIATLGQTLVRHRRKRRVYIGCMKSGPVLSQKG VRYHEPEYWKFGENGNRYFRHATGQLYAISKDLAKYISLNQKVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCE WKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWSATF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 357 | 357 | 2.5E-209 | – | |
| PANTHER | 1 | 357 | 357 | 2.5E-209 | ||
| Pfam | 1 | 71 | 71 | 1.7E-16 | ||
| Coils | 52 | 72 | 21 | - | – | |
| Gene3D | 105 | 301 | 197 | 8.8E-7 | – | |
| Pfam | 111 | 308 | 198 | 4.0E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0188300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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