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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0191400 |
| Transcript ID | LotjaGi3g1v0191400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxisome biogenesis protein 22; TAIR: AT3G21865.1 peroxin 22; Swiss-Prot: sp|Q9LSX7|PEX22_ARATH Peroxisome biogenesis protein 22; TrEMBL-Plants: tr|I1M423|I1M423_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0191400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27712202..27717682) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTGTAATTAAGTGCAGCTGATAAATTTGTTTGGAACAAAACCAGAAAGCTCGTAGAAATCGTTGACGGCAAACACCC GAAGCCATCTCTCTCTCTCTCTCGCTCAGTGATAAATTCGATGATGACAAACTGAAACTGAAACTTCCTTCGATTTTCAC GAATCCGGTGAAGCTCAGCCATGTCAACTGGTGGCGCTGGTGCTGGTGACGGTGACACCTCCAAACAACAACTCTTTCAC CTCATCAAACGCTTCGGTGCTTATGTCACTTTCAAGATCTCCAACCTCGTCTCCCTCTCTCTTCACAATCTCGTACGTCT TCTCTCACTTGCTTTTACTTTTTTCCTAAAATTTTCCAAATCATTGAATTGGATCTGATACGCTATGAAAATCTTGTCCT TTTTGTTGTTGATTGCCGTTTGTCGAATTCGTAATTGTTTGTTCTGGTTTCATGTTCAATTTTCTTCACACTTCTGTTTG AAAATTTTGATTTTTATGTGTACCCTTTATCGTTAATTGAATTATTAGGATCCGGGTTGTTTAATTTTTCACCCAAACTG TGAAAGTTTTGTTTTTTAATGATAAAACTCAACTGGGTATTTGCCAAGCTTAATTTAATGCGAGGTGAGGGTAGAAAGGA ATCAAAGGATAGGTTTTATGCTCATATTTATTGTCCAGAATGGGGGAAAAGAGTGAGCTGGTGTATACATCATAATAGGT CTCATTAGTATAAAAGATCAAAGTACTACTGTTTTGATGTTTGTTTGTGGAATTTGGAGCATGTGCCTTACAATGATCCT CATGATGATATATACTTTGTAATAGGATATACGCTCTATTGGGGCGGTTGCTGGTCTAGCTGTTGCAATTGTTTTCACAT GGAGGCTGTTGAGATCCCCTGGTGAGCCTCAACAGAGGCAACAAAAACGGCAAGGTGCTTCATCTAGTAATAGTAATCCT GGAGCAAGGGCAGGTTCAATTGCCTCGGTAGTTCCTTCTGAAGCTAGTTTGCCCTCACATGATTCAAGGGCACAAAATGT TGTGGATGAGTTCTTTCAGCCAGTCAAGGTAAAATGTTTTTTGCTACTTTCCTTTGTTTGATGATTCAGAGTTCAAACAA TGTGTGAAGTTTTTAGATTAGTGCAAGACAAGTTGGGCTGAGTTTGATAGCTTTGCGTGTGATTGGCAAATGGCAATTCT AACTTTGCTTTTTCCTCAACTTTTTCAGCCAACCTTGGGGCAGATAGTTAGGCAGAAGTTGAGTGAAGGAAGAAAGGTAA TTAAACACCTTCTCTTCAATACTCTTACGTGTTTATGATGTATGATTCGTGCCTACTTTGTTGTTGTTATGATCTTGTAG TTGTAGGAATCAACTTCTCTTGTGTGATCATTAGAAATATCTATCTTTGGTGACCATTGCCATCTTAGATCATAATCTAG TGCTAGTTAAATTAATATGCCATATCATATTACTAACCTATATAGCTCTATAAATGAGATTTGTATGAATGAATGTTGGG CAATCACTTAATAATTTTTTGGTTTTGGATGAGAAGGGATATGAAAAATTGATATGAAGTTGTTCTTGCTGTTGTTTTAA TTGCTATCTATCCTTAACTTCAATTAAGAATACAATGAGGGACAGTGCATTAACTTATATTTTTAAACTCGCGGCCCCTA TTAATTCCTAGTACACTGGATTTTGAAACAAATAAGAGCAATTATTATTATTGTTGCTGTTATTGTTGCTGCTGTCTGTG TGTCTTTGTGTGTGTGTGTGATTCGAAAAGGGGTTCTCATTATGAAGCCTCTCTCATTGTAGAGGTATACTACTGACCAT AAGTTTAAAATTACTTACCAAGAACATCTGTTGTTGAGGGAATGAGTAAATGTTACTTATTAACAGTCTTTTAATTTGAA TTTCTGTAGTAAAATGATTGATGACAATCTCAGAAGTCAGAAATTTAAAATAGTAAGGTATCCATTGAATTAATAAGTTT GAATTTACATTAATCGAAAATTCAGGTTGTAGCTGAAACCACTTAGAAACTCAAGCTATTTTCTTTTTCTTTTGGTAAAC CATATTATGTTATTTACCGGTTTCTCTGCAACATAGTTGATTATTAACTGGAATGAGATACTTCACACTTGATGACACAA GGAACATTAATTTTACAAGTTTGTCGTATTAATTGCTTAACATTAATATGGTCAATGTTTCCTGACTTCATGACCCATCT CTTGTATGTAGGTAACTTGTCGTCTTCTTGGAGTGGTCCTTGAGGAAACTAGTCCAGAGGAGCTTCAGGTGGTGAAATTG TCCTCTCTTATACTTTTGTTTTCTGACATCAAAATGGAGTAAGAAATCAATGTGGTTTATGCTGTTCTTGGCAGAAACAA GCTACTGTCAGATCCTCTGTGCTAGAAGTATTGTTGGAAATAACAAAATATTGTGATTTATATCTCATGGAACGAGTTCT GGATGACGAAAGCGAGGTGTGTGTCGTTTGTTATTAGCTTATTTTATAATCTGATAAAATTAATCGAATTGATGAACTAT ACGTCATATCATATACTGCAAATTTATCATTTTCCAAATGATTCTGTAAGCATGAACTAAGATATTGTATAATTGTTTGT GGCAAAAATTCTTACCTTATAATTTGGTTTTGGAAACTTTAATGGTCCCATTGTTAATGACACATTAGATGTATGAAATG TCATTATTATTTTATTATTTTTTTTTAACTTTGTCCAGCTTATCCATCCTCCCATAGATCACATGCTGCTAAGTTTTTAA TATCATACAACTGCTAATTTGAATTTGAGATTGTATGTCTGTTATAGCTGTTAGTCTCAGATGTCAAACTGAAATTCCTT GCAAGTGTCACCTCTCTTGTTAAAATGCATGCTATTAAAATGTCTAAAGCTTTTATGAATGAATTATTTTTGCAGAAAAG AGTTCTTGTAGCGTTAGAAGAAGCAGGGGTATTCACTTCAGGTGGTTTGGTTAAGGACAAGGTATGTGAACATGCATTGA ACAATTATACCTTTTTTTAAGCTCTGTAGAACTTGACTACCTTCTTGATGTGGCATTGTTGGGCATTTTGTCTGCCAAGT TTGCCTGCATAAACAAGTATTTTTCCACTTTAAAAGGACATCTTTTTGTGTTCTGTTCACATGTTGATGGATAACACAGG AATTATCATTTTCATTTTGTTTTAACATGCTCTCTGACAATGAATACTAGTATGTGACTAAAATTTGCATTGATTGACAT CTTGATCAGAGATCTCCTAGAGGACATCTATGCTACTTTCAAGAGTACCTTTAGAGAGAGAGGTTTAATTAAATGATTTT TTTTTTAAGAATTATGATTGAGGTTGAGAAGACCAAAGACAAATTCAATATGAAATGTCATTTTGGAAAATGAATGCTTT GCATCACCATGATGCACGACTCCAGTAGGGGGTTTAATTTTAAACAACAATAGTAAAAAATGTTTATTGTCATTTGCTGC TTGTTTCTTATTGTTCCTTGCAAGATATCCTTTGGAACCTGAAATTTGAAATTCTGAAACAATTACTCGTGACTGTCTCC TTGTCTTCCAACAAAATTAAATCTGCTTGATCATCGTTATAGTTGGTGTAACAATGAAGAAAAAGAATCAGAGGAATGTT GCAAAATTAGATGGCAACAAATATTCAGATTAAATTGTGATTTGTAGCAAATGTCAGTTTTCTATGTACCTAATGTGCTG TAAATATCCATGAGTTCAACAAACTGCCTACTTTTCTCTTGTGATTCTTAATAACCTTTTGTGCTCTATTTTGCTATCTG GCACCTATATGCAGGTTCTCTTCTGCAGCACAGAGAATGGACGGTCATCATTTGTTCGACAATTGGAGCCAGATTGGCAT ATCGACACAAATCCTGAAATTGTCTTTCAGTTAGCCGTATGTTACTATATTTAACTATATTGAGCTAGTCAAATACATTA TCTGATTAATAACCATATCATTATTTCTTTTTATGGCTAAAATATTACATTTTCATTATTATGTCCTCTAATGGTTAACA ATAAATCATGTTGCAGAGGTTTATCAAGTATCAACTCCATGTATCTCCTCACAAAAGCGAACGAACTGCTGGTAATGTGT TCAGTGCTCCAGCCCTGGAACTGTTCTTTGGATCCATATGAAACTAAACACTTAAAATCAGATACTATTCTTAAATGGCT ACCGGTTTGTTTTCTCCCTGCATTTTGGATTCTATCTTCACAATACAATTTTCCTAGCTTTTCTTGATGTATTAGAACTA GGTTAGATTTTCTTCAAGCTTTGATGGGTTCTCAGTCATGTAGGTGAAAGATCTGCTGTTTATGTGTATGATGTTTTGAG GAACAAGTTCTATTATTTTCCTTTTCTCATCTTTGATTGAAATCTGTGCATTAGATTGGATCCCATCCCGACATTTTAAA CTGGCAAGGTGGCAAATTTTAATGGATATTTGTATCTGATCATTTTACATATGTCAATCATGGAAAATATTACTGATCAA GTGATCATCCTCCAAACAGTATGGAGAAGTTTATTGGTCTGAATTGTATAACTTCAAAAAGTTCGTGTATTTGATTCGCT TGTAACTATTTATCTCTGGTATGGTGGTGGCATTTTGATACTTGGAATGACCAACTAAAAATGCAGATCCTTTCATTGAT ATCATTACATCATGATGCAGTTTTTTTTGCGAATACATCATGATGCGATTAAACTCAGGCTATCCACCGCCGACAACAAT TAATAATCTCCTTGCCACGTGTGCTTGCTCTAAAGGGTAAATGGCTTGCCACAATATGCACATCATTTCTCATGGACAAG GATCAAACTACTGATCTCATGGTTAGGGGATGAAATAAATTAAGTACTATGGCACAATGGCACATGCGTGTTTAAAACTA GTTAATTATGACATTGTTACTCCCTCCGTGACAAGGATCAAACTACTGATCTCATGGTTAGGGCCTAGGGGATGAAATAA ACTAAGTACTATGGCACAATGGCACATGAGTGTTTAAAATTAGTTAATTATGACATTGTTACTCCCTCCGTTCCTATTTG TTCCTATTTAACTGTCCAGGAAGAGAAGAAACACACATATTAATGAGTGCAATTAATTTTGTTACTTTTCATAAAAATAT TATTTGATTTTCTATTTCACCCTTTAAAATGTATATTATCTTTCTTCATTTATTGTTCCTGCAAGGACATTTTTTGGAAA AACATCATTTAATGCTCTCTTGAAACTTTAAGTGGACAGATATATAGGAACAATTTTTTTCTTCAAAATGGACAGTTAAT AAGGAACGGAGGGAGTATGTTCTTTGCTCAGTAAGTGTTTAAAATTAGTTAATTATGACATTGTTATGTTCTTTGCTTTG GTCATTTAAACCATTAAAACATCTATTTGTATTTAAATATA
CDS sequence (LotjaGi3g1v0191400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAACTGGTGGCGCTGGTGCTGGTGACGGTGACACCTCCAAACAACAACTCTTTCACCTCATCAAACGCTTCGGTGC TTATGTCACTTTCAAGATCTCCAACCTCGTCTCCCTCTCTCTTCACAATCTCGATATACGCTCTATTGGGGCGGTTGCTG GTCTAGCTGTTGCAATTGTTTTCACATGGAGGCTGTTGAGATCCCCTGGTGAGCCTCAACAGAGGCAACAAAAACGGCAA GGTGCTTCATCTAGTAATAGTAATCCTGGAGCAAGGGCAGGTTCAATTGCCTCGGTAGTTCCTTCTGAAGCTAGTTTGCC CTCACATGATTCAAGGGCACAAAATGTTGTGGATGAGTTCTTTCAGCCAGTCAAGCCAACCTTGGGGCAGATAGTTAGGC AGAAGTTGAGTGAAGGAAGAAAGGTAACTTGTCGTCTTCTTGGAGTGGTCCTTGAGGAAACTAGTCCAGAGGAGCTTCAG AAACAAGCTACTGTCAGATCCTCTGTGCTAGAAGTATTGTTGGAAATAACAAAATATTGTGATTTATATCTCATGGAACG AGTTCTGGATGACGAAAGCGAGAAAAGAGTTCTTGTAGCGTTAGAAGAAGCAGGGGTATTCACTTCAGGTGGTTTGGTTA AGGACAAGGTTCTCTTCTGCAGCACAGAGAATGGACGGTCATCATTTGTTCGACAATTGGAGCCAGATTGGCATATCGAC ACAAATCCTGAAATTGTCTTTCAGTTAGCCAGGTTTATCAAGTATCAACTCCATGTATCTCCTCACAAAAGCGAACGAAC TGCTGGTAATGTGTTCAGTGCTCCAGCCCTGGAACTGTTCTTTGGATCCATATGA
Protein sequence (LotjaGi3g1v0191400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTGGAGAGDGDTSKQQLFHLIKRFGAYVTFKISNLVSLSLHNLDIRSIGAVAGLAVAIVFTWRLLRSPGEPQQRQQKRQ GASSSNSNPGARAGSIASVVPSEASLPSHDSRAQNVVDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVVLEETSPEELQ KQATVRSSVLEVLLEITKYCDLYLMERVLDDESEKRVLVALEEAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHID TNPEIVFQLARFIKYQLHVSPHKSERTAGNVFSAPALELFFGSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | - | – | |
| PANTHER | 9 | 283 | 275 | 1.7E-140 | – | |
| PANTHER | 9 | 283 | 275 | 1.7E-140 | ||
| Phobius | 46 | 66 | 21 | - | – | |
| Phobius | 67 | 284 | 218 | - | – | |
| MobiDBLite | 70 | 93 | 24 | - | – | |
| MobiDBLite | 70 | 96 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Peroxisome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules. |
Expression pattern of LotjaGi3g1v0191400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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