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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0201900 |
| Transcript ID | LotjaGi3g1v0201900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR-repeat protein; TAIR: AT5G01720.1 RNI-like superfamily protein; Swiss-Prot: sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3; TrEMBL-Plants: tr|A0A1J7HEU2|A0A1J7HEU2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0201900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:29439284..29444128) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAGACAAGAAAATGGCATTTTGGTCTTTGTGGTGGACCTTTCCTCATCTTCCTCACTTACTACCTCCTCCTCCTTT TCATTCTATTAACTTCAACTTCTCAACACCCAAAGCCTTCATATCATATCATAACAAATCTCCCATAAACCGTTATTCCA AAACCGCCACCAACTGAAACAAAAAACGCCACAAACAGAAAATGAAGAAACAGAAGCAGAACCGTTCATCAGAAACACAA CAACACTCGAATTCGAACCCATTCGAGTCTCTCTCCGAGGAACTCGTCTTCACCATCCTCGATTTCCTCGAAGCTGATTC TCAAGCCAGCAAATCGTTCTCGCAGTCATGTAAATGGTTCCACTCGCTGGAATCCAGGCACCGTCGCGTCCTCAGGCCAC TACGCGCCGACCACTTGCCGGCGATGGCGGCGCGTTACCCTTCAGTGGAGGAGCTCGATCTCTCGCGGTGTCCGCGCGTG GGTGATGAATCACTGACTCTGGTGGCTGCTTCTTACCGGGAAACGCTCCGGCGGGTGGACCTGTCGCGGTCGAGATTCTT CACCGGGAATGGGCTGCTGAGCGTTGCTGTGAGCTGCCGGAACTTGGTGGAGCTTGACCTGTCCAACGCGACGGAGATAA GGGATGCTGCGGCGGCTGCGGTTGCTCGCGCCGGGAACCTCCGGAAGCTGTGGCTGAGCAGGTGCAAGCTGATTACGGAT ATGGGGATCGGGTGTATCGCAGTTGGGTGCAGGAAGTTGAGGCTGATTTGCTTGAAGTGGTGTGTGGGTGTTGGAGATTT GGGGGTTGATTTGCTTGCTATTAAGTGTAAGGAGCTGAGCAATTTGGATCTTTCTTATTTGCCTGTGAGTTTTCTACTCC ACCTCATTTGATTTTGGATTTTGTTTATTTTTCAATGTTTTGCTATATGATCTTTGTGGTTTTAATTCTAAGTTTGGAGA TTACTATAGGTGAAAAAGGGTCGGATTGAGAGTTGAATAAAGCTATGACTTTAATTTGTATGTATCATTTCCAAATTTAG AAATTGGTTTCTTTTTTTGTTGGGGGAGAGGGAAATGTCAATAGTTGTTGATGGGGTTAAAACAGTGTTGTCAAATAGTG GTTATAGCGGCGCTATATTGTAGCGCTTTTTTGGCTTACCGCTACTCCGCTATTTGCCGCTTTAAGAGGCTGGAAATAGC ATTTTTGGCTTATTGCTATTGTCCGCGATTCGCGATTAACAACATTGGGTTAAAAGTGTTGAAGAACCTGAATTGAGGAA AATTTTAAAGGGTAAGTGTTAAAATGGAAAGGAGATATTGGCGGTTGGGGTTTATTAATTCATTTATTGAACGGTAATTG TTCTGTTCCGTCATTAGTTAGAGTCATTACTCTAGATTTAAAATTAAGTTGATTTTGTGTTTGATTGTGCTCTTTCTTCG CGAGTTATGTCTTTGAAATGATATGGTTGATGGAACTAGTGTTATTGGTTTCTTGTGTTGTGCAGATCACGGAGAAATGT CTCTCATCGATCTTCAAGTTGCAACATCTTGAAGATTTGGTCCTTGAAGGATGCTTTGGCATTGATGATGACAGCCTCAA TAATGTTGTCTTCAAACAAGGTTGCAAGACATTAAAGGTAGATGGAGATGGATAACTTTCAATGATGAGGGTAACCTAAT ATTCAATGTAAAAATCCAACTGGAACCGGACAAGTTAGTTTGAACATAGGGTAGAAGTCATCATAGTTTTTCCTTTTTTG TTTTATCCAGTGAATCAAATTAAATTTGTTGCTCTTTTAATGCATAGTTATTCAGTTATTCATAACATTCATTTTTCTTG CGTTAAGAGTACACTTGTTTTCATTAACTAACTTGTTATTCGACTTCACTGCCTTTTGCAGAAACTCGATATCTCTGGTT GTCAGAACATAAGTCACATTGGTCTGTCAAAGCTAACTAGCATTTCTGGATGTGTAGAACGACTCATTTTAGCAGATGGT TCTCCTGTAATTCTTCTGGCTTTGTAATTTTTTTCCTGCTTTTCAATTGATGAGTCTAACTAATGGTTTGCATTTGATTT TCCAGGTGACTCTTGCTCTTGCTAATGGTTTGAGTAAACTTTCCATGTTGCAATCAATAATATTAGATGGCTGCCTTGTT ACTTCTGATGGATTAAGGGCCATTGGAAATTTGCGCATTTCTCTCTGGGAGTTGAGTCTAAGCAAATGTTCAGGAGTGAC AGATGAAGCCCTCTCATTCATTGTGTCTAAACACACAGATCTAAGGAAACTTGACATCACGTGTTGCCGTATGATAACAG ATGTTTCCATCGCCAGCATTGCAAATTCATGCACAAGCCTCACTTCTCTCAAAATGGAGTCATGTACTCTAGTTCCACAG GAAGCATTTGTCCTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGACATAACAGATAATGAAGTTGATGATGAAGG TTTGCCTATTTCCCTCCTCCTATGGAATTCTTAACTTTCACATCAGCTGCTATACTTACCTAGTAGCCTCCCCTCTCTGC AGGTCTTAAGTCTATATCTAATTGTTCCAGGCTCTCCAGCCTGAAAGTAGGAATCTGCCTTAACATAACTGACAGAGGAG TGGCCTATATTGGCATGTGTTGCTCAAAGTTAAAGGAACTGGATCTATACAGGTTTGTGAATCAAATATATGAACCTTTA CTTTACTTCTAATTAGATGAATATTCTTTGCATTTTCTCTTAATTTGCTTTTCACCATAAACTATTATTGAGCTAGGTTG AGTTTTTAAATTTAAACATTTGAAAACATAGTTTAGCAAACTGGCTTTGATACAATTTGGATGTATCTTTTTTATTAAAT GAATTAAAAACCAGTATCAGACCTAGTTCGTCTAAAGCACCTTTCTTTTTTCCACATCCTTGATATCAAATGCAAATACA GCATAAAGATTCTAAGATTTATGCTGTTTGCACAAAGATCATTGTTTGTTCTCACCGGAGATTATTTTAAATTTCCAGGT CTACAGGAATTACAGATTTAGGCATTTCAGCAATTGCTTGTGGTTGCCCGGGCCTTGAAATAATTAATACATCTTATTGT ACTAACATCACGGATGGGTCATTAATCTCCTTGTCAAAATGTCGAAATCTGAAGACACTCGAAATACGTGGATGTCTTCT CGTTACGTCTATAGGTCTGGCATCTATCGCGATGAATTGTAAACAACTAATCTGCGTAGACATAAAGAAGTGTTACAACA TTGATGATAGTGGGATGATTCCCCTAGCATATTTCTCCAAAAGTCTAAGACAGGTATTTTGTCTTTTCTCACTTTTCTAG GAAACATCAGAGATGCAGGAAAGCTTTGCTAAGGTTTTAATGTTTATTATGTCCTTTTCCTGATTTGCAGATAAATTTGT CATATAGCTCAGTTACGGATGTGGGGCTTCTGTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACCATCCTTCACCTT CAAGGCTTGGCTCCAGGAGGACTCGCTGCTGCCTTATTGGCATGTAGAGGGCTAACAAAAGTGAAGCTTCACCTTTCACT AAGATCTCTGTTACCTGAGCTGCTTATCAGACATGTAGAAGCACGCGGCTGTGTGTTTGAATGGAGAGATAAAGTGTTTC AGGTATATTCATGATTCTTATCTTTGGATTTAGCAAAGCAAAATACTAACTAATTTTATATTGGTGTTAGTCTCATATAT TTTATGTTACAATTGAAGAATTGGGGGAAGTCTGAGAATTTTGGAACCAACATGTTTTTTTAATATTTTCCCGTCCCCAA CCAACACTAGCATTGCTGTCTCGGTGTCTCCTGCTAATGTTGACCAGGAGAAGTCCTCCTAACTGTCCAATTCTAAAGAA TCAATTATTTGTCTAAAGTCTTAAGCATATTGATACGTTGCAATTTTAAGCTTTGCTGATTTAAAGTTAATAGTTTCTAA ACTATAGACGATGCGAATCATATCTATTTAGCAAAACTTGATGAGCACAGGTTTAGGATCGGTTACATTATTAATTTTTA TTTGTCATGGACAGGCTGAATTGGACCCCAAGTGTTGGAAACTGCAGTTAGAGGATCTGATGCACTAGGAACTTCTCAGG CTGTTTGAAAATGATAAAGATATTTGCACAACCCATGATCCAAGTTGGAACGCGGAAGAAGGGGATGGATGCATTTCTGT TCAAAGTGAAGAACCTGAAATGCAAACTTAATATGAAAGATGTTAGAAGTGTTTTAGTCCATTGGGGGTTACACAGCCCC CGTGATGGAGATAACCAATTAGCTTCCCATAGGGCCCTCAAAACCTGGTTTTTTATCGAGCTTAATGGCATAGTGTGATC CATATAGCCGATTTGACTTGGTGAAATAAGACTTTTGTTGTTTTTGTTAACACGCTGAAGCAAGGGTGATCATTTCCCCC TTTTTTTTAGCTGTAAAAAGCAGGGGCAATCTAGCACATAAAAACATTGTATGTATCCCCTTCTGTTCAAGCTTTTTGTT TTTTGTATTGTTTTTTCGTTTTCCTGTGAAAAGCACGGGTAATCAACTGTATACAATTTTGTAATCTCCTGTTTTTGTTT TATATCCAATTAAAACTGTTCAGAGACATAAACAATGGAGAGTGTTTCTAATATTCTTGCTAATATTGTTGACATTACTA TATGTCAAAATATGGACAATTCTAACAAAATTAGTGGCCAAAATGTAATTTCATAAAAAAAAACAGGTCCTACCGGGAGT CGAACCCAGGTCGCTGGATTCAAAGTCCAGAGTGCTAACCACTAC
CDS sequence (LotjaGi3g1v0201900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAACAGAAGCAGAACCGTTCATCAGAAACACAACAACACTCGAATTCGAACCCATTCGAGTCTCTCTCCGAGGA ACTCGTCTTCACCATCCTCGATTTCCTCGAAGCTGATTCTCAAGCCAGCAAATCGTTCTCGCAGTCATGTAAATGGTTCC ACTCGCTGGAATCCAGGCACCGTCGCGTCCTCAGGCCACTACGCGCCGACCACTTGCCGGCGATGGCGGCGCGTTACCCT TCAGTGGAGGAGCTCGATCTCTCGCGGTGTCCGCGCGTGGGTGATGAATCACTGACTCTGGTGGCTGCTTCTTACCGGGA AACGCTCCGGCGGGTGGACCTGTCGCGGTCGAGATTCTTCACCGGGAATGGGCTGCTGAGCGTTGCTGTGAGCTGCCGGA ACTTGGTGGAGCTTGACCTGTCCAACGCGACGGAGATAAGGGATGCTGCGGCGGCTGCGGTTGCTCGCGCCGGGAACCTC CGGAAGCTGTGGCTGAGCAGGTGCAAGCTGATTACGGATATGGGGATCGGGTGTATCGCAGTTGGGTGCAGGAAGTTGAG GCTGATTTGCTTGAAGTGGTGTGTGGGTGTTGGAGATTTGGGGGTTGATTTGCTTGCTATTAAGTGTAAGGAGCTGAGCA ATTTGGATCTTTCTTATTTGCCTATCACGGAGAAATGTCTCTCATCGATCTTCAAGTTGCAACATCTTGAAGATTTGGTC CTTGAAGGATGCTTTGGCATTGATGATGACAGCCTCAATAATGTTGTCTTCAAACAAGGTTGCAAGACATTAAAGAAACT CGATATCTCTGGTTGTCAGAACATAAGTCACATTGGTCTGTCAAAGCTAACTAGCATTTCTGGATGTGTAGAACGACTCA TTTTAGCAGATGGTTCTCCTGTGACTCTTGCTCTTGCTAATGGTTTGAGTAAACTTTCCATGTTGCAATCAATAATATTA GATGGCTGCCTTGTTACTTCTGATGGATTAAGGGCCATTGGAAATTTGCGCATTTCTCTCTGGGAGTTGAGTCTAAGCAA ATGTTCAGGAGTGACAGATGAAGCCCTCTCATTCATTGTGTCTAAACACACAGATCTAAGGAAACTTGACATCACGTGTT GCCGTATGATAACAGATGTTTCCATCGCCAGCATTGCAAATTCATGCACAAGCCTCACTTCTCTCAAAATGGAGTCATGT ACTCTAGTTCCACAGGAAGCATTTGTCCTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGACATAACAGATAATGA AGTTGATGATGAAGGTCTTAAGTCTATATCTAATTGTTCCAGGCTCTCCAGCCTGAAAGTAGGAATCTGCCTTAACATAA CTGACAGAGGAGTGGCCTATATTGGCATGTGTTGCTCAAAGTTAAAGGAACTGGATCTATACAGGTCTACAGGAATTACA GATTTAGGCATTTCAGCAATTGCTTGTGGTTGCCCGGGCCTTGAAATAATTAATACATCTTATTGTACTAACATCACGGA TGGGTCATTAATCTCCTTGTCAAAATGTCGAAATCTGAAGACACTCGAAATACGTGGATGTCTTCTCGTTACGTCTATAG GTCTGGCATCTATCGCGATGAATTGTAAACAACTAATCTGCGTAGACATAAAGAAGTGTTACAACATTGATGATAGTGGG ATGATTCCCCTAGCATATTTCTCCAAAAGTCTAAGACAGATAAATTTGTCATATAGCTCAGTTACGGATGTGGGGCTTCT GTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACCATCCTTCACCTTCAAGGCTTGGCTCCAGGAGGACTCGCTGCTG CCTTATTGGCATGTAGAGGGCTAACAAAAGTGAAGCTTCACCTTTCACTAAGATCTCTGTTACCTGAGCTGCTTATCAGA CATGTAGAAGCACGCGGCTGTGTGTTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCCAAGTGTTGGAAACT GCAGTTAGAGGATCTGATGCACTAG
Protein sequence (LotjaGi3g1v0201900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKQKQNRSSETQQHSNSNPFESLSEELVFTILDFLEADSQASKSFSQSCKWFHSLESRHRRVLRPLRADHLPAMAARYP SVEELDLSRCPRVGDESLTLVAASYRETLRRVDLSRSRFFTGNGLLSVAVSCRNLVELDLSNATEIRDAAAAAVARAGNL RKLWLSRCKLITDMGIGCIAVGCRKLRLICLKWCVGVGDLGVDLLAIKCKELSNLDLSYLPITEKCLSSIFKLQHLEDLV LEGCFGIDDDSLNNVVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGCVERLILADGSPVTLALANGLSKLSMLQSIIL DGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESC TLVPQEAFVLIGQKCHYLEELDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGIT DLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSG MIPLAYFSKSLRQINLSYSSVTDVGLLSLASISCLQSFTILHLQGLAPGGLAAALLACRGLTKVKLHLSLRSLLPELLIR HVEARGCVFEWRDKVFQAELDPKCWKLQLEDLMH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| Gene3D | 3 | 285 | 283 | 1.1E-39 | ||
| PANTHER | 43 | 621 | 579 | 8.2E-160 | – | |
| PANTHER | 43 | 621 | 579 | 8.2E-160 | – | |
| SUPERFAMILY | 71 | 284 | 214 | 9.42E-36 | – | |
| SMART | 79 | 104 | 26 | 1.3 | ||
| SMART | 106 | 131 | 26 | 50.0 | ||
| SMART | 132 | 157 | 26 | 59.0 | ||
| SMART | 158 | 182 | 25 | 20.0 | ||
| SMART | 183 | 208 | 26 | 0.75 | ||
| SMART | 209 | 233 | 25 | 110.0 | ||
| SMART | 234 | 258 | 25 | 240.0 | ||
| SUPERFAMILY | 260 | 507 | 248 | 3.73E-42 | – | |
| SMART | 261 | 286 | 26 | 0.016 | ||
| Pfam | 261 | 283 | 23 | 0.17 | ||
| Gene3D | 303 | 407 | 105 | 1.0E-16 | ||
| SMART | 312 | 336 | 25 | 330.0 | ||
| SMART | 337 | 362 | 26 | 15.0 | ||
| SMART | 363 | 388 | 26 | 0.0031 | ||
| Pfam | 363 | 386 | 24 | 0.34 | ||
| SMART | 389 | 414 | 26 | 12.0 | ||
| Gene3D | 408 | 655 | 248 | 1.9E-41 | ||
| Pfam | 414 | 437 | 24 | 5.7E-5 | ||
| SMART | 415 | 438 | 24 | 170.0 | ||
| SMART | 439 | 464 | 26 | 3.7 | ||
| Pfam | 465 | 488 | 24 | 1.5 | ||
| SMART | 465 | 490 | 26 | 0.0063 | ||
| SUPERFAMILY | 465 | 625 | 161 | 6.2E-22 | – | |
| SMART | 491 | 516 | 26 | 0.047 | ||
| SMART | 517 | 541 | 25 | 33.0 | ||
| SMART | 542 | 567 | 26 | 5.7 | ||
| SMART | 568 | 592 | 25 | 12.0 | ||
| Pfam | 569 | 590 | 22 | 1.7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0201900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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