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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0209800 |
| Transcript ID | LotjaGi3g1v0209800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant cadmium resistance 2, putative; TAIR: AT1G14870.1 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|A0A1J7IB57|A0A1J7IB57_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0209800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:31106102..31110842) extracted from Lotus japonicus Gifu genome v1.2.
GCTAGCCAACCTCTTAATTTCCCCACTATTATAAATTGAGAACCCAAATTGTATCACATAGTTAAACCTAACCTTTTACT TTAATTATAAGCGTTATCTTATCTTCTATCCATCCAGAAGTTGAACAAATTTCTTCCATCCAACACAAGAGCATTACATT AACTAGTTAATCGATCATGAATAAAACATTAGCAGGCTCCTCCGACTACCAACCAATACCTCCTCCGCGACCGCAACCTC CCGTCGAATGGTCTACCGGGTTATGTGATTGCTTCTCTGACTACGACAATTGTAAGGATGTGTTTGTTTCTTTGTATTCA CTAACTAATTCAAACATGATTTCATATATCCTAACATATAAAAAGAGAAATTGAGAAACAAGAATTTGTATCACCTAACT TCTGGTTATACATCACATTCATTATGAATTAACTCTATTTATGAGTTATTATTGTGTGTGAATTTCTTTCAGGTTGCCTA ACGTGTTGGTGTCCATGGGTAACATTTGGTCGAACTGCAGAGATTCTTGAAAAGGGATCCATTTGTAAGGGGTTAACTCA TTCATTTATATATGATTAATTAATATATAGCAGCTTTTGGATAATTTATGCTGAATTAATTTGTTGCATGCAGCTTGTGG TTATAGTGGTTTGAACCATTTTGTATATGGCCGCTTATACTCAGTCTACTACCGAAGAAAGATGAGATCTCAGTACAATT TGAAAGGAAATAATTGCTTGGATTGCTTGACTCATTTCTTTTGCAATAGATGCGCATTGTGCCAAGAGTACCGTGAGCTT GAAAAACATGGATTTAACATGAAGATCGGTGTGTATCTCATATTAAGATCATTTTTTTTCTTGAGGATAGATAGATACTA ATAATTAATATCATCTTTTTTTGGTTGAACTTAATTGATTAATAAATAGGGTGGCATGGAAATGTTGAGCAACAGACAAG GGGAGTAGCCATGACTTCAACCGCTCCAACAGTGGAAAAGGGCATGACGCGTTGAAAGACTTTTTTACATGGCTAGTGCA ATTTTCAAAACAAATTACTAAACTAGTGCAACTTTTGTTTTAATTACAAAAATAGTGTAAATCGCCACTTGAAGTGGCGA TACCTCTTAATTTTTTTATGAAATCGCCACTAGCAGTGGCGAAACCATAATTTCTTTTTGACTTTGTTTATTAGTGACGG AAAAGTATCCGTCACAAATTTCGTCGCTAAAATTTTGCCACGATAGTATTCACGCTTCAATTTCCGTCGCTAAATTCTTT TTCAATATTCACTAGGATTTTGAGACGAAATTTACTTCGTCGCAAACAGAATTCCGTCGCTAGACATTTTGCGACGGGTG CTATCTCTCTTCACATTCGGTCACTGATACCATTTATATTATATATTAGGATTTTGTGACTGATACAATTCGGTCACTAA CAAAGAAAGTCAAGAAAAAAAAAATTATAGGGTGTCGCCACTACCAGTGGCGATTTCATAAAAAACAAAAGAAAATAAAG TGATATCGCCAATGAGATTGGCGATTTACACTAAACATGTAAATAAAAAAAAAGTTGCTCCATTTTGGTAATAAACATTT CAAATTACACCATCTAGGTAAAAAAAGTCCCTTTGAAATGAGGATCTGTGTGCACGCATGCATGTGATGAAGTTCTTAAT TCATACAAGTTTGTGGTGTTAGATCTGAAGCATGACAATATATATATATATATATATATATATATATATATATATATGAA GAATAAATAAAGTAGTTTCTGTCTTTTCTTTTTCTTTTCATTTAGCATTTTCATGTCATGTGTTCTTATGGTGAATATGA CATTACGATCATATGTACCTAGAATTCTCAAAATGTGATGCTAGTTCTAACTTCAACAATTCTGTATATGAGAATTCTGT AACAAGTAAAAGCAGAGTCCTTATCATGAATTACAGTATAATAATTTAAGGAATAAGGATATAAGTTGTTTAAAAAAAAG ATATAAGTTTATTTAGAAATATATGTATGACCTATTTAAGTATTTCAAGTATTCATTTTCCGATGTACTAAAAAAAAATT ATCTCAAGTACATTAGGTTGCTTTTTTCTTCATAATTCTGTGTCCAACTTATCTAAATTTACCACTACTATACTTTCCTG ATTTACAATCCTTAAACAAATTTGGTAAATATTAAAACAAAATCACAATAACAACATTAAATATTCCTAGTTTTTTCAAT ATTTTTTGAAGGCCAATTTTTTTTTTGGTTCCATTTTTTTTTTCAAATTTTTTAAATATATCCTTACTGAAAATCGTTAA TCATATTCCAATTTTATTTTTTCATGATTTACAATATGAAATACTACAAAAATATAATGAACTAGTATTTTTTACTTTTC ATATTTTTTACTGCGTAAAATTTTTAAATTCGTGTTATTGTTGTTATATGTATTAAAAGATAATGGACATTGATATTAAT ATCACCCACACCTATCATTATCATCCCCCAATGTGTACCACACTTGAAAGTGTGTTACATTTTCACTACCGCTACATACT AGGGTGGTTGGTATTAATAAGGGTGTGTGTAGTACTTTTTAACAGTGGCCAAAGATAATTTGTCAATTAATAAATGATAA AATTTAATTTTGGATATAAGAAGTTATTAGTTTGTAAGTATTTTTTTCATGATAAATGTGTTTGTTTTTCTCTTGCAGAA AAGAATTTATTATATATATCTCTGTGTGTGTGTGTCCTTTCATCCTTATTTATGTAAAATAATAAACATATGAAAAGAAA TCTAAGAAATAAAAGAGAGTAAAAAAAAAAAAATGACAATACATGAGAGTTTGGTGCACATATACTTCCTCTGAGATATA TCCATTCAGGAAGGCACTCTTAATTACATCCATCTGATGGAGAATTATGTTGTGATTTACTGAGAATGAGATCAGCAGTC TGATAGCTTCCAATCTTGCTATTGGAGCAAATGTTTCAGTATAATCTATTCCTTCTTGCTGACTGTAGCCTTGAGCAACT AGCCTTGCTTTGTTTCTGACTACATCTCCTTTTTCATTCAGCTTGTTTCTGAACACCCATTTGGTTCCAATGATGTGAGC GCCTTGAGGTTTCTTGACAAGGTTCCAAACATCGTTCTTGGAGAATTGATTCAGTTCTTCTTCCATTGCCAGAATCCAGT CTTTGTCTTGAAGAGCTTCATCAATTGATTTTGGTTCAATTAAGGATACCAAACCCTTCAGACTAAGTAGAGTCTCTTCA GAGGGTCTGAATGCTGATCTGGTTCTGACTGATTCATCTTTGTTTCCCAGAATCAACTCCTTAGGGTGAGAGGCAACAAT TCTGCTATTCCTCTGAGGCTGTGAATCAGAGGGACCAACTTCCTCTGGAGAGTCTTCCTCTGGCTCAGCTTCCTCTAGAG CTTTGCCTTTGTCAGAAACATTAATACTCATATCTGCAAACTTTTCAACTAGCTTTTACTGATCAGAGTCAAGCTTATCA TCAAATATAACATGAATAGATTATTCAATAGTTTTAGCATCAGTATTATAAATTCTAAAACCTTTAGATCGTTCAGAGTA ACCAAGTAATAGAAATTTAGAAGATTTAGAATCAAACTTATGTAATCTATCCTTAGTATTCAGAGCATAGCAAACACAAC CAAAAGGATGAAAGTAAGAAATGTTGGGTTTTACATTCTTCCACAATTCATAAGGAGTCTTATTCAGAATTGGTCTGATA GAGATCCTATTATGAATGTAACATGTTGTGTTTACTGCCTCAGCCCAGAAGTGCTTTGCCATGTCAGTTTCTTGAAGCAT GGTTCTAGCCATCTCTTGAAGAGTTATATTCTTCCTCTCAACAACACCATTCTGTTAAGGAGTTCTAGGACAAGAGAAAT CATGTGCAATTCCATAGGAATCAAGCAGACTCTCAAACTTGTCATTCTCAAACTCTCCACCATGATCACTTCTGACACGC ATAATCCTGCAAGCCTTCTCGTTTAGCACTTGGGCAATAAAGGTAGAGAACACAGAATGAGACTCATCCTTGCGGGATAG AAATTTTACTCATGTACAGCGGCTATAGTCGTCAACAATGATCATCCCATATCTCTTGCCACCTATAGACTCAGTTTTCA CTGGTCCAAAAAGGTCGATATGCAGAAGTTCCAACGACCTTGAGGTGGAAACAACATTCTTTGCCTTGAAAGGGACTTTT GTAAATTTGCCTGTCTGGCATGCTTCACAAAGAGCATCTGAAGAGAAATTCAGAGTGGGTAAGCCCCTGACAAGGTCAAG CTTACTCAGCTGAGAGATCTTTCTCATACTAGCATGCCCTAACCATATATGCCATACCCATTGCTCTTCATTAACAGAAA GAAGGCACTTTACTTTCTGAGTTTCCAACTCAGATAATCTGATCTTATAGGTGTTGTTCCTCCTCTTGCTATTAAACAGA ACTGAGCCATCGATCTGACTTACAACCCTGCAAGACTTTTGATTGAAGATTATATCATAAGCCTTGTCAGCTAATTGACT TATAGACAATAAGTTATGATTCAAGCCATCTACCAACAGAACATTATCAATGCATGGACTATTATCAACACCAATAGTAC CAGTACCAACAATTTTACCCTTTTCATTACCACCAAAGCCAACTTCGCCTCCAGGCTTAAGTTTTAGCTCTTGGAACATA CGCCTTTCTCCTGTCATGTGA
CDS sequence (LotjaGi3g1v0209800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAAAACATTAGCAGGCTCCTCCGACTACCAACCAATACCTCCTCCGCGACCGCAACCTCCCGTCGAATGGTCTAC CGGGTTATGTGATTGCTTCTCTGACTACGACAATTGTTGCCTAACGTGTTGGTGTCCATGGGTAACATTTGGTCGAACTG CAGAGATTCTTGAAAAGGGATCCATTTCTTGTGGTTATAGTGGTTTGAACCATTTTGTATATGGCCGCTTATACTCAGTC TACTACCGAAGAAAGATGAGATCTCAGTACAATTTGAAAGGAAATAATTGCTTGGATTGCTTGACTCATTTCTTTTGCAA TAGATGCGCATTGTGCCAAGAGTACCGTGAGCTTGAAAAACATGGATTTAACATGAAGATCGGGTGGCATGGAAATGTTG AGCAACAGACAAGGGGAGTAGCCATGACTTCAACCGCTCCAACAGTGGAAAAGGGCATGACGCGTTGA
Protein sequence (LotjaGi3g1v0209800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKTLAGSSDYQPIPPPRPQPPVEWSTGLCDCFSDYDNCCLTCWCPWVTFGRTAEILEKGSISCGYSGLNHFVYGRLYSV YYRRKMRSQYNLKGNNCLDCLTHFFCNRCALCQEYRELEKHGFNMKIGWHGNVEQQTRGVAMTSTAPTVEKGMTR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 154 | 135 | 1.4E-59 | – | |
| PANTHER | 20 | 154 | 135 | 1.4E-59 | ||
| TIGRFAM | 24 | 119 | 96 | 2.3E-29 | ||
| Pfam | 25 | 117 | 93 | 2.8E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0209800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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