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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0213000 |
| Transcript ID | LotjaGi3g1v0213000.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7KDG9|K7KDG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0213000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:31994170..32002255) extracted from Lotus japonicus Gifu genome v1.2.
ACAAATGTATGCATGCGTGTTGGTTCTTTCTTGTGCATAGTGACTGTACACTGCAATTTCCGGAGTCAACGATTCTGTTT GAGCTCTCCATTTGACTTTCAGTTCCTTTTCTCCAGATCTCAAATCATCCATGGCGGCTGACCCATATTCCCATCGGAGC AATTCGCCATCTGAGTACTTCAATTGGGATGATTTGTTGGATCAGAATCAAACACTGCGGCCTAAATGGGTTTCAACTTC TCCTCCTCCCCGATCTCCACCTCCACCTCCAGTTCGAGTTGTAAATGAAGTGTTTTGGGAGCACTTCTTAACGGAAAGGC CCGGAACTAGTGATGAGTTGTTGAGAATCCACGATGTGTTCTTGAGTTTCAGAGGGGGGGACACGCGTGCTTCATTCACT TCACATCTCTATGCCGCTCTTCAAAACGCAGGGATCAAAGTTTTCAGGGACGACGATTCCCTCCCAAGGGGAGATCAAAT TTCTACCTCACTGTTGCAAGCAATTGAAGAGTCTCATATTTCAATTGTTGTTTTCTCGACAAATTATGCGGATTCGCGGT GGTGTCTGGATGAGTTGGAGAAAATAATGGACTGTCACAGAACCATAGGCCAGGTGGTTTTGCCGGTGTTCTACGATGTA AATCCCTCTGAAGTGCGGCACCAAACTGGTGAGTTTGGGAAAAAATTTCACAATCATATAAAGGGAGACAATTTGTTGCT ATATCCTCTGGGTTCCCGTTGGAAGAGTTGGAGGGAGGCGCTTCGTGAGGCTGGGGGTATTGCAGGGTTTGTTGTTTTAA ATTCCAGGTAAGTTCACAAACACACACTTCATTTACAACTGCTTTGGAATTCTTTTATCTTCATTTTCTTTTTAATACTT TTTATGTCATTTGGTGTAGTTTAATCAATACTCATGAGAGAAATTAAGCATAGGGAGAAATTTATGAGTTTGTAACTTTT TAGATAAGAGTAATTTAGGAAAGTTAATAACATTTTTTTTACAAATTTATTGATACTAACTACTTTCCTTTTTGATACAA AGTTATTAACTTCTTATTATCTTGAGTTTTCAAAATAATAAATGACTACTACATCAGTTCCTTATTAACTGTCCACCTTG AATAAATTTTTTTATTCCTATATATCTGTCAACTTAGCATTTCAAAAGAACATTAAATGATGTTTTTCCTAATAATGTCC TTGTATGAGCAATAAATGAGGGAAGATAAAACACATTTTAGAGGGTAAAACAGGAAAACAAGTAATAATTATTTGAAAAT TACCAAAATTAATTACTCTCCTTAATATGTGTGTTTCTTCTCTTCCTGGACAGTTAAATAGGAACGGAGGTAGTAAAAAA TACAAATGTTTATTACAAAAAAAAATATTAAGATGGAAGAGCAAACTTTCTGTCTCTAGAAATTCCCAAAGACACTCCAC AATTTTTATGAAAATCTTTTTGAAGTTTTGATGAAATTGACAATAACTAGATATTGTCTCAAAAAAATACCAGCCGTGTT GGAAATATTGTGGCCTTAGGCAAAGTTAAGGCCAAATAAGCACTTATACTATGAGTCTATTAGATAAGATCAAATAAACT CTTCCAAACACACCCTCAATCAAGTAACCAGCATGAATTTCACCATTTTTAATGCACCTAGCATGCTCTTGCATAATTGG ATAAAATTCTACAAATAACTCAATCAAACTCAAAAAGTTGCTTCTGTCTTTTTCATATATGACTTCTCATGTCTTGTATG TTTGAATCAATGGACTGGGCGGGCTTCCCACAAGCCTATGCCCGCCCAAGCGTTAGACAGAGGAACGATTAAGGCTCCAG ATAAGGCAAGGCGACCATCAAGGTAGTGAACAGACGCTCGCCCGATACATGGACCTGAGCCAATCTTATCTTATTTACGT TGGGATTTGGGCCTCGTTTGTGAGGCCCAATCCCAGAACCTTCTAGATAAGGGCAGCACCCACTATAAAAGGGGGTCCCT CAATGTACTAGACACCTTTTTGATCATTAATGAAAGAATATCCTTATTTTACATCATCTATCCTTTTATGTTCTGCTAGG GTTTACGAGAATGTTCCTTTATTCCCTAAGTAGGCCTTAGTACGGAACAATCAACATTGTTAATTTTAAGTAGAATTGAT TTTGATAAAATTGACTATCGTAAAAGTGAGGTTAAAGTAAAGCTATGTTGCACCGATACTCTGGTACCATGTACGGATAC AGGTACGAGATACGTAATTTATGTAAGGTAATGTTATTTGAATTACTTTTTTTTAAATTGTTTTTCAATGGATTTGATAG AACATCATATATGAGAAATAATGATGGGCCTTATGATGAAACAATTGTAGAAGCAAACAAGGCAAGGCCCAAAGTGTGGC GTGTCTACACTAGGAGAAAGAGAATGAATGAGAATTAATGAGTGAGCTGGCATGATTCCCTTGATTAGTGGGATTCAGTT ATATTAGGATTCTCTTGATTAGTGGGATTGGGTTATATTAGCAAGAAGGGGAGAAGGATAAGGCATGCAGGCTTTTGGTG AGAATAAGGTTAGGAGGGAATACTTCTCTGGTTAGGAGTTGCAGACTCTGGAAAGTTTCCATTGTAGGGCCTTGTGCTCA TCTTTTTATTTCATATTCAATAATAATCTACCTCAGAAATTCTGAGCTCTATCAGGATTTTAATATCCATAGATATGTGT GTATAGGAATGAAACAATAATTTTCTTTGCTTCATTTTTTTTTGAACGTTCTTTGGTTCATTTTATAGGAATGAAAGTGA GGCTATTGAGAATATTGTTGAAAATATTACTAGTTTGCTTGACAAGACAGACATGTTCATTGCTGATAATCCAGTGGGAG TTGAATCTCGAGTGCAAGATATGATTCTACTACTAGACAACCAAGAATCAAATGATGTTTTATTACTTGGGGTTAGGGGT ATGGGAGGGATTGGTAAAACAACCATTGCAAAAGCTATTTACAATGAGATTGGCCGCAATTTTGAGGGGAGGAGCTTCCT TGCAAATATTAGGGAAGTCTGGGAGCAAGATGCTGGACAAGTGCATTTACAAGAACAACTTCTGTTTGATATCTTCAAAA AAACAACAAAGATACATAGCATTGAATCAGGAAAAAATATATTAAAGGATAGACTTTGCAGTAAAAGAGTACTTCTTGTA CTTGACGATGTGAATAAATTGGACCAACTGAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTTCAGGGAGTAGAATAAT CATCACAACCAGAGATCAGCATATACTGAGAGGGAATAGAGTTAACCAAGTTTACATAATGAAAGAAATGGATGAAAGTG AATCCACTGACCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGTCCTAGGGAAGATTTTGCTGAACTTTCAAGAAACGTA ATTGAGTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGACAGGGGGGTAACAGAATGGAA GAGTGTATTGGAGAAACTCAAAACAATCCCCAATGATCAAGTACAGAAAAAGTTAAGAATAAGCTATGATGGTTTAAGTG ATGATAAAGAGAAAGATATATTCCTTGACATAGCATGTTTCTTTATTGGGATGGACAGAAATGAAGCTATACAAATATTA AATGGCTGCAAACTTTTTGCAGAAATTGGAATAAGTGTCCTTGTTGAGAGAAGTCTTTTAACTGTTGATAATAAGAACAA GCTTGGAATGCATGATTTGCTGCGAGACATGGGAAGAGAAATCATTCGTGAGAAATCACCAAAGGAGCCTGAGGAGCGTA GCAGGTTATGGTTTCATGAGGATGTTATCGAAGTATTATCAGACCAAACTGTAAGAACTTCATTTTAAAATATCCAATTC TGAAGGAATTATTTCAGTCACTTGTTAACATTCATTTGTTTTCTTGATTAGTTTGGTTATGAATTGTTTGTACTTCCTGG CTCCTAGTAAAAAATCCTGGGTTTCACCACATTAATTTTAGCTGCCCTATATCTTTTAACTAGGCTTTTCTTTTACCTGT TTATACATCTTGTTTCACAGGGAACTAAAGCTATTGAAGGACTGGCTTTGAAGTTGCCAGTTAATAATACAAAATGTTTC AGCACTGAAGCATTTGAGAAGATGAAGAAACTCAGATTGCTTCAACTTGCTGGTGTAAAACTTGAAGGAGATTTTAAATA TCTTTCAAGAAATCTGAGATGGCTGTGTTGGCGGGGATTTCCGTTATCTTTCCTGCCTAAAAACCTTCGTCAAGAAAATT TAGTTTCAATCATGTTAGAAAACAGCAATATCAAACATGGATGGAAAGATGGCCAGGTATTGATTGAGTTTAGCTTTTCG CATTTCATGAATTCTTTTCACTTTTCGATTTATAGATGCAATTTAAATTAAGAATCTGAAATAGTAGTAATATTTAATTA TGTGGTACTTTTAGACACAGTAAACATATGGTTCACAGATGCACAAGTTTTGAATATAGGCCACCATAGAATTGTCTATA TGTTTTATATTAACCTTACATGAAAGTCCTTTTAACTAAAACAGACAGAATATTTTACAAACTAAATCTTGTGCATGTGC GAAACAGTTTGATTAAAAAAGCTTCAAATTCAAATGTCAAACCTATAAATGATCCCAATGTTTCAAGTTCTCACCATTAT GCTCATACATGACTTTTACTAATTTCTGTAACATTATATATAGAAATGTAGCCTTGGCTGGAAGATTTTTTAAGGCAAAA GTACTTCGAAACCAATGGATATAGGCAATGACACTCACTCATGTTTACTTTCCATTCTCTAGTGATATTGCAATTGCTTC CATCTATTTTGTAAGCTTTTTCCATATGTTCTTTCTATAACATTTCTGATCTTGCAGAGGATGGAGATGCTGAAAATTTT GAATCTTAGTCATTCTCAGCATTTGACACAGACCCCAGACTTTTCATGTATGCCTAATCTTGAAAAGCTTGTACTTAGAG ATTGTACAAGCCTGTCTGAGGTTTCCCATAGCATTGGATATCTCAATAAAGTTTTACTGATAAATTTGAAAGGCTGTATT AGCCTTCGTAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTCATCCTTTCTGGATGTTTAATGATTGA CAAGTTGGAAGAGGACGTGGAACAGATGGAATCTTTGACAACCCTGATTGCAGATAACACTGCAATAACAAGAGTCCCCT ATTCATTAGTCAGGTCAAAAAGCATTGGATATATTTCTTTGTGCGGTCATGAAGGACTCTCTCGTGATGTGTTTCCTTCT ATCATTTGGTCTTGGATGTCACCAACAAATAACCTCTCATCCTTAGTTCAAACATCTGCAGGCATGTCATCTCTTGTTTC TTTAAATGTATCAAGTAGTAGTTCCCAGGGACTATCATCTATTCCCGTGGACCTCCCAAAGCTTCAAAGTCTGTGGATGG AGTCTGGCTCAGAACTTCAACTTTCTCGAGATGCAGAAAGAATTTTGGGTGCCTTGTATGCTATGAATTCTTCTAAAGAA TTGGAATCAACTGCAACTACATCAGAAATATCAAATAAGGAAACTTCTGGCTTGATGCAATGCAGTTGTCAAGTGCTTGA TTCAGGATCAAAAGATTCCTTGAAATCTCTTTTATTTCAAATGGGAATGAATTGCCAAGCCACCAGTATTCTGAAAGAGA GCATTTTAGAGGTTTCTATCTCTCCCTCTCTCTTGTCTATAGGTTTGTATTTTAAAATTAAGATATATGAAGTCCTATGT AAATTCTTGCATATAGTACATCTAGAACTATTAAAGAAATACATGTGTTAACAACCAGATTCAATCTTTCCTGTAAGAAC AAGAAATCATTGAAACTGTTTTTTTGCTTTAGCTAGTACGTAGAGCAGTGACATTATTCGTGTGTATAATGTGTTATGAA AAACTGTTACAACCTTCAATGTACATGCTGATTTTAGTGAGTGGCACAATTCGTTAAAGTCGCTGTATAAGTATCCAGAG GAATTAGGAAATTCACTTTAATTTTGGTTGGAATGGGGTTTTAAGCTGGACTGGTAGTCTCTGTTTGAAGAATCCAAGCA ATCATTTTAACGATTTAATTTTTTCTTCTTCGATAAGTTATCATCATTTCTAGTTTGTCTGTTAATTAGAAGATCATAAT TTTATCGACGAGAAAATGATTAGTTATCTTAGGAGGATAACTATACTTTTAATTGTTGAATGAATGATAAGGTTGCATTC ATATACTGTTCAATAAAACTTTCAGCATATTTTCATTTTTACAGAATATGGCTGTTAGAGGGTCTGGTTTGCTCCCCGGA GACAATTATCCAGATTGGTCAACCTTCAACTCGGAAGGTTGTTCTGTGATTTTTGAAGTCCCTCAAGTGAACGGGCGCAG TTTGAAGACAATAATTTGTGTTGTCCATTCTTCTACCACAGATGACATAACATCAGATGGCCTTCAAAATGTGTTGGTGA TAAATTGCACAAAGAACACAATTCAGCTCTATAAGAGGAATGCATTAGCCTCCTTTGAAGATGAAGAGTGGCAGAGAGTA GTATCAAATATTGAACCGGGTAACAAAGTAAAGATGGTGGTTGTTTTTGAGAACGGATTCACTGTGAAGAAGACAACAGT TTATCTTGTATATGATGAAGAGAAAATGGAACCTTGCAATGCACCATATAAGAATGAAATTGTTTTTGGTGGTGATGAAA TTGAATCCGCTGTCAGGAAAAGCTCTGCTCAAGTGGAGTCAGTGAATGACTTGAAACAAAAACAAAAGAGAAGGAAATTC CAATAAAAGATTGTGGAAGAATGGCTGGTTAAAACTATTTCTATGGTGCCCGCAAATCTCATATAGTTGCTTGCTGATTG TGGGGTTTGATCAACAAACACACAAATCTCTTCCCATGGGATTGCATCAGCAAATGGCAGAACAATATCATCTGCAACAA CAATAGGGATGCAACAAAATATATCACAGCTTGAACCAATCTTAGGTCCAAGGAGCATAGACAAAACACAGCTTGTTGCA TGTCCTTGTGGTATGTGGTTGGATGCTCAATGCAAATGTCAAAGTAGTGGATTGTTCTTAAAGTTCTCCCATGCTGCTGC TCTTGCACCTCTGCAAGATTGCGAATCACAGTTTAACCAGTCATGATTATTTGTTGATTCAAGTTTGTTTTTTATGAAAG CAGCAACTCACACACCCGGACTTGTGCATCCATTTTTTCTTAGCAGCAATTTTCCAGCACATCTCCTCAGTAACAGCACT CATTTTTCTAAATATACAGAGATTACATTAGCAATTGATGTAATATATTTATCAGCAATTTGATAGAAGTGGGTTCCTCT CCCAGGAAAAACTAATTTTTCACCTTTTACAACCATCAGTTCTGGTCTGATTTTCCAGTTGCAAGATTGGCATATTTGCC TTCCATCCCTGGAGTCGGAGGAATTAAGCAAATATAAACGTCCCTCAGCCATTGAGAAGTGTCGCCCATAGTGCTCCGTC AAACGCTCAGATAAACAATATTCACAGACCTTAATAAAATGAGGAGTAAAAACAAATTGATTGAGTGTTTCTGAAATATA TTTCTTACTTGTCTGCGTAGCACCTACGATCTCTCATTCCCAACACGTAGATTATTGCTGCATTTCCACATCACGAATCA CAACTGGGATTTGCTGTGTTTGGATCTTGATGCCAAGCATTTGCCAATGGATACATGGGCACTGTGATCAAAACGATCAT ATAAAATGCAAGTTGCAGAACCGTCGATGTTGAAGGAGTAATTCTAAATCCAGTTTTTTTTTATGTGCTTGTGTATATCT ATCTTATAGGCTACGGGGAGGAGTTGCTAGGAGGAGGAGACACACATTGCATGCGGGGAGGGATAATGTGAATCCCTGCT TCCCTTCCTTGCAATTTTACAAAATTAGAATATTTCGATGAATTTTTTAATTCATCTGGTCACACAACCCATAATGGCGG GTGAAT
CDS sequence (LotjaGi3g1v0213000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAACTCAGATTGCTTCAACTTGCTGGTGTAAAACTTGAAGGAGATTTTAAATATCTTTCAAGAAATCTGAGATG GCTGTGTTGGCGGGGATTTCCGTTATCTTTCCTGCCTAAAAACCTTCGTCAAGAAAATTTAGTTTCAATCATGTTAGAAA ACAGCAATATCAAACATGGATGGAAAGATGGCCAGAGGATGGAGATGCTGAAAATTTTGAATCTTAGTCATTCTCAGCAT TTGACACAGACCCCAGACTTTTCATGTATGCCTAATCTTGAAAAGCTTGTACTTAGAGATTGTACAAGCCTGTCTGAGGT TTCCCATAGCATTGGATATCTCAATAAAGTTTTACTGATAAATTTGAAAGGCTGTATTAGCCTTCGTAACCTTCCAAGAA GCATCTATAAGTTGAAATCTCTGAAAACTCTCATCCTTTCTGGATGTTTAATGATTGACAAGTTGGAAGAGGACGTGGAA CAGATGGAATCTTTGACAACCCTGATTGCAGATAACACTGCAATAACAAGAGTCCCCTATTCATTAGTCAGGTCAAAAAG CATTGGATATATTTCTTTGTGCGGTCATGAAGGACTCTCTCGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCAC CAACAAATAACCTCTCATCCTTAGTTCAAACATCTGCAGGCATGTCATCTCTTGTTTCTTTAAATGTATCAAGTAGTAGT TCCCAGGGACTATCATCTATTCCCGTGGACCTCCCAAAGCTTCAAAGTCTGTGGATGGAGTCTGGCTCAGAACTTCAACT TTCTCGAGATGCAGAAAGAATTTTGGGTGCCTTGTATGCTATGAATTCTTCTAAAGAATTGGAATCAACTGCAACTACAT CAGAAATATCAAATAAGGAAACTTCTGGCTTGATGCAATGCAGTTGTCAAGTGCTTGATTCAGGATCAAAAGATTCCTTG AAATCTCTTTTATTTCAAATGGGAATGAATTGCCAAGCCACCAGTATTCTGAAAGAGAGCATTTTAGAGAATATGGCTGT TAGAGGGTCTGGTTTGCTCCCCGGAGACAATTATCCAGATTGGTCAACCTTCAACTCGGAAGGTTGTTCTGTGATTTTTG AAGTCCCTCAAGTGAACGGGCGCAGTTTGAAGACAATAATTTGTGTTGTCCATTCTTCTACCACAGATGACATAACATCA GATGGCCTTCAAAATGTGTTGGTGATAAATTGCACAAAGAACACAATTCAGCTCTATAAGAGGAATGCATTAGCCTCCTT TGAAGATGAAGAGTGGCAGAGAGTAGTATCAAATATTGAACCGGGTAACAAAGTAAAGATGGTGGTTGTTTTTGAGAACG GATTCACTGTGAAGAAGACAACAGTTTATCTTGTATATGATGAAGAGAAAATGGAACCTTGCAATGCACCATATAAGAAT GAAATTGTTTTTGGTGGTGATGAAATTGAATCCGCTGTCAGGAAAAGCTCTGCTCAAGTGGAGTCAGTGAATGACTTGAA ACAAAAACAAAAGAGAAGGAAATTCCAATAA
Protein sequence (LotjaGi3g1v0213000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKLRLLQLAGVKLEGDFKYLSRNLRWLCWRGFPLSFLPKNLRQENLVSIMLENSNIKHGWKDGQRMEMLKILNLSHSQH LTQTPDFSCMPNLEKLVLRDCTSLSEVSHSIGYLNKVLLINLKGCISLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDVE QMESLTTLIADNTAITRVPYSLVRSKSIGYISLCGHEGLSRDVFPSIIWSWMSPTNNLSSLVQTSAGMSSLVSLNVSSSS SQGLSSIPVDLPKLQSLWMESGSELQLSRDAERILGALYAMNSSKELESTATTSEISNKETSGLMQCSCQVLDSGSKDSL KSLLFQMGMNCQATSILKESILENMAVRGSGLLPGDNYPDWSTFNSEGCSVIFEVPQVNGRSLKTIICVVHSSTTDDITS DGLQNVLVINCTKNTIQLYKRNALASFEDEEWQRVVSNIEPGNKVKMVVVFENGFTVKKTTVYLVYDEEKMEPCNAPYKN EIVFGGDEIESAVRKSSAQVESVNDLKQKQKRRKFQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 485 | 485 | 4.7E-151 | – | |
| PANTHER | 1 | 485 | 485 | 4.7E-151 | – | |
| Gene3D | 1 | 314 | 314 | 9.0E-26 | ||
| SUPERFAMILY | 2 | 263 | 262 | 9.64E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0213000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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