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LotjaGi3g1v0218800.1

Overview

Field Value
Gene ID LotjaGi3g1v0218800
Transcript ID LotjaGi3g1v0218800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Deoxyuridine 5'-triphosphate nucleotidohydrolase; TAIR: AT3G46940.2 DUTP-PYROPHOSPHATASE-LIKE 1; Swiss-Prot: sp|P32518|DUT_SOLLC Deoxyuridine 5'-triphosphate nucleotidohydrolase; TrEMBL-Plants: tr|V7BAU1|V7BAU1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0218800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:32959241..32964772) extracted from Lotus japonicus Gifu genome v1.2.

TAAAATTCCGTATTCTCCCTATTGAATACGGAACTTAAAATTCCGTACTGTATTTAAGCATGCGTGTCACATTTTCAACC ACTCATTATATACTAAAATAGATACGGAATTTTATTTTCCGTATTGATACGGAACTTTAAATTCCGTATTTAATAAAGTG GGGTGCAAAGCCTAAGGGGTGGGGCACCAAACTCAATTCTCGTTAACTGAGACAACAAGTGAAGAACCCTAAACCTGTGA ATCAGAGTCAACAAGCCCCTTCATCATCAGCTTCTGGTTAGTTACTTAGATCCCTTCTTTTTTGTGTTTAAGAATGCTCA TTTTTCATTTTTGTGTTAAAGATTGTTCAGTTCCCTTCTTGCAATTGCTTCAAGTTTTGGCGTTGTGATGTTTGTCGTGC TATACTGCTATATGGGTGTGTTTAATTCGCTGAAAGGTGTTACCTTGTGTTTGATACCGTGGCGGCATTTTGCAATGGCC ATTGGTACTGTGGTATAATCTATTGATGCGTTTAGATGCTGTTTGTGTCACATTCAGTTCTGGGTATTGCTGTGGGGTAT GTTTTTATTTACTTGTAGCTCTTTGAAATAGGATATTGGGTTTCTTAGAACTACACACTTGGCTTTTAATATGACATTTA GGTACTTGTTGTTGAAATGTTGGAGGACTTGGAAGTAAACATCAAACATGGTTCTTCCTTTGCGTTTTTTATTTGATTTT AATTGTTCGAATTTTTCTGAATTTTGTTTTATATTCAATTTTTTAGTTTTAGACCTAGCTTATTCTTATTCTTATGTTTA TCTTTACATTCATTTTTACTCCAATCTCCAACATTGCAGAACGCCCTTTGCCTACACCATCAATTTCACTAGCTAGAATG GCCGAGTCCCACACCAGCAACGGTTCCGAGATCCAAGAGCCATCACCCAAGATCCCAAAGCTCCACCAAAATGATGACAT TTCTAACATCCCTCCTCTTCTTCGAGTGAAGAAGCTCTCTGACAAGGCTGTTTTGCCCGCTAGGGCTTCCCATCTCTCTG CTGGTTATGATCTCTCTAGGTATAGCCTCCTTTATCATATTAGACTATGTTTGGATATCAGTTGGCACCAGTACAAAGAG ACGTTAGCACACACTTTGGGATAAAAAATGAATGGAATTTTACTTATGGATTATGATTAAAGTCCATTCATATTACACTT AACTGGTATCCAATCACATTCTATGTTTATATGTATCAAAATGTCTACTTTTGACTTAGCTTTTTTCTTTCTTTCTGTGT GGTAGTGCTGTGGAGACAAAGGTACCTGCTAGAGGGAAGGCTCTGGTGGCTACTGATATTAGCATTTCAATTCCAGAAGG AACCTATGCTCGCATTGGTAATTGTAAATTTTCTCTATAAATCAGGCAATTCAGGATTTGTTTGTTGCCGCGTTGATATA ATTGTGAGTTTGATTTGCAGCACCACGATCAGGGTTGACTTGGAAGCATTCGATCGATGTGGGTGCCGGGGTGATTGATG CTGATTATAGGGGTCCTGTTGGGGTCATACTGTTCAATCATTCTGATCTGGACTTTGAGGTGAAGATTGGGGATAGGATT GCACAGCTGATCATCGAGAAGATTGTGACCCCGGATGTAGCTGAGGTTGAGGATTTGGATTCCACTGTCAGAGGTGAAGG TGGTTTTGGATCTACTGGTGTTTAATTAGGATCTTGTATTAATGGGATGTGTACAAAGCTTGCTGGTAAATTGACTAGAA GGACACCTCTTCTGGATTGGTGCTGGTGAAGGGCTCTCTGTAGGAACTTTAACTAGGTGTGGGTGTTAAGTAATCGTAGT CACAACCTTGCTTTGCATATCCATGAAGTGTTTCTTTCCTGAATATTTACTTACCTGAGACTAAATTTTTTCACTTAATA GCCTTTTATACAGCATGTATTTAACTTAACCATTGAGATAAGAGTTTTAATTAAGTTGATCAAATGTATAAAATTTAGAG TCTTAAAACTGATTGTTACTTTGGATAAAATTTTAAAATGTAGGTAAATTCAACTATAAGATTACATGTGAATGTCTTAT TTAATCAAACATTGATTATTATGTTCTTTTGATTTTATGGTTAGATTTACTAAATTCATATTTCACAAAAGAAAAAAGCA TGCAGGTGCCCAGAAAATAAGGAGAAAAGGCATATAAAATTCCAAACCAGTTAATATCTTTTCTCCCTAATGCATTGCAG AAAGCAAAATGAATTAAAAAAATTCACTGATGGACGAATAACAAAACTACCAAAAAAGCATCGCATAATGCTGAAGATAG CAAAAGAAAAAAAATCTTTACAAATTTCAGTTTTTGTTCTTTTTGGCCTCCATGTTAGTCCCATCTTTGAGAGTCTCTTG TGCATCATTTTCCATTCCAAGACTGAAAAGACAAGCTGCCTGAAGATACAAAGCAGTAGGCCACTCAGGAGATACAGCTT GTGCTTGCATAGCATCCCCCAGAGCTTCCTGTGTCATACCATTCATCAAATAAGATAAGCAGCGCCTTGCATACACTGTA GGTGACACCATAGTCCCTCCATCTATGAACTGAAAAACAAAATTTGAGATATATTTATATTTATAGTTGACTCCTATTTG CAACAAGGAAAACTTTTACATTTCAATAATATGCTAGAAAGAACATACATGACACAGGACAGGACACAGAGATATGGAAC AAAGTATTTATGCTGTTGGAAAGTTGAAAATTGAAATCATAATGTGGTTTTATTCCAATTTTAGGGAAGACTGGCAGACT TTTAGTAGCTTCTTCATTTAAGTATTATTACATTTTCAATGTAGTCCTATTTGGTTAAATGATCCTTTTAGATGTTAAGC AAGATAGTGTGCAACATCACAGTCACTGCAAGTTTGCAACATTAACATTATGCATAACATCCAATTTATGAAATAGTCCT CTTACTTGCGTGTAGCATTTAATGGCAGTGGCAAAGTCCTTAGCTCTAAATGCAGTATCACCATGCTTCTTCAAGTTCAA GGTTTCCTGCATTTGACTTGTCCACAATTGAAAGGAAAGCTGCAATTTCATCATAAAGAAGGATCAACATTGGAGTAGGT AACTGAAAATTAGAGGGAAAAGTGTGTAAATAGAGTTCATGTTCCAATTTATTTTAGGCAGTGACTATTTGCGCCTCCTA TTTTGCTAAGTGCGTCATCCCCAAAACTGAAAAAAGACCAAAATACCCTTCAGTAATTTAAATTAAAAAAAAAACTACCG TATCTTTCCCTACAAACCCTCCCCCCTCTTTCAACCGTATAACCCCTCTTCCTCTCCAACCCAATTTCAAAATTTTCAAC CCTCACAAAATCAAGTCTCTCAAACCCACATTAACCATGGGAGGTTGTATTTTGTGTTTTCATTCAGTCCCTCGATTTGA TTCTGCCATGGGAGGATGTTTCGTGACTTGCCCGCACTCTAAACTGCGGACAGGTTTTATGACTACCGCATATTTAAGTG CGGTTAGCCTGTGGATGGTCAATTTTTTTTAATTCTCTCTAAATTTTCTCTGAATTTGCCTTCCGCAGTTTAACTGCGGA ACTATTATTCCAACACATCACGTTCCGCACTTTTAAGTGCGGGAAAATCAATTTTATTCAGGTAGCAGTACCAGACCTTA ACACGATTGAAATGACTAAGTTTTTCACTTCCGCTAACAAGTTAGCGGAAGGTATAAATTTCACACTTCCGCACTTATGT TAGCGGGAGCGTGTAATTTGTTTCACTACCGCATGTTTAAGTGCGGGACTAACCAGTTACGTCGGGAAGTCACGAAATCG CGATGAAAGCTCGGAAAAAGGTAAAAACTTACATGAGTAAGCTTCTATTCTTGACTTGAGATCACCCAAAAGAAGTTGGG AGTGGAGGATTAAGAGGAGGGTGAGGAGGAGGGTGAGGAGGAAGAAGGAGATGGTGTGTGGGAAGTAAAAATAAAATATT ACCTTTTTATGTTTTTTTTACTAAGGGCAATGTTGGAATTTTTAAAAAAGGAGATGGCGGACTTAGTAAAACGGGGAGGC GCAAATAGTCACTGCCTTTATTTTATATCGTATTTAAGTGAGATGAAACCCTCTTGTATAAGTTGAAGATGGGCAAACCT CATTGGCAATTCCTTCATCATCCTTGTAACCAGTCTTCTCTAATATTTCATGTATGGCAGTTAGATCCAGTCTCAAACAT GCTTCACCAAAAGGTGTCAATGATACTGGCTTTGTTGAGGATGCAGTTTCATTCCGGAGACCCATCAGAACATATGAAGG GACCTGCTTGTTCAAAGGAGAAGTTTTAGTCTTCCTAAGATAGGTATCACACTTCTCACATTTCTTCAACACAAGTATAG TACTATAGTAGTTAAATATATGTAAACATTTCCTATTCCAAATTGAGTGAATGGTCAATTTGGTACTTAACGATTTTTCC GTTGGAAAGTTAGTCTCTGAAAGAAGGAAATGCATTCGAAAGTCCCTGAATGTGTAGGGACTAACTTGACTGACCTTTTA GTTGACAAAACCGTATGGACTAGCTTGACTGACGTTTTACACATTCAGAGACTTTCAAATGTATTTCTTTCTTCCGGGGA CTAACTTTCCAGTGGCAGAATCTTTCAAGGATCAAGTTGATCATGCACTCATTCCAAATTACATGTTTAGCATTACCATG CATGATAAGCTTTGGTAATTGCTTGTGTATAGATAATAGGTCTAATTGATCTGTTATTGTATATCAATGCTTTGATACCT CTGTTTCTTTCTGAAGTGGCATAAGAGATGCAACAAGGGACTTTGCATTTGGCCTCTCACGACCTTCATACTGTAAGCAG CGCGAAGCCAAACGAACCAACTCAGTTCCATCATCTTTTGAAAAGTGACCCTCTAAGGCAGAATCCATCAGCATCAAAAA GTTTTTGCCACGTATCAGGTCCAGTGCCTGCAAATGAAGAGAAGTGAATTCTGCAGCAAATATAAAATATTTTCACTTCA TCAAATTTACCACATCTCTAAGAAGAATCTCAAGTGACTACCCGTTGGCACCAGAGCTAATGCTTTAGCACTACTTTGAG GTAAAAAGTGAGCGAAACTCTTCTTTTGAATTAGGATGATTGTGATTTCACATTATCTCAACTGGTGGACACACACTTAT AAACTGTTTAGTACCAATGATCATTTTGTGAGCAAGTGCAATACAAAATTTCTTAATGATGATTTACATGTAAATGACAA TATGTCCTACTGCTACATGCTGAATGTGTATTCTTAAGCAATTATATCAGCCATTAACATTCTTGTCTAAAATCAATGGT CTGAACATAAATTAGAGTTTGTTCAGGACTTAATAATGGATAGAAATTAAAACTTACATGGCTTGGGGGAATATGTTTAC CACTCAAGAGGTCTAGCAACAGGGTTCCGAAACTGTAAACCACACTCTCTTGCGTCACTCTACCTGCATATAAGGTCAAA TGTACAAAAAAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0218800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCGAGTCCCACACCAGCAACGGTTCCGAGATCCAAGAGCCATCACCCAAGATCCCAAAGCTCCACCAAAATGATGA CATTTCTAACATCCCTCCTCTTCTTCGAGTGAAGAAGCTCTCTGACAAGGCTGTTTTGCCCGCTAGGGCTTCCCATCTCT CTGCTGGTTATGATCTCTCTAGTGCTGTGGAGACAAAGGTACCTGCTAGAGGGAAGGCTCTGGTGGCTACTGATATTAGC ATTTCAATTCCAGAAGGAACCTATGCTCGCATTGCACCACGATCAGGGTTGACTTGGAAGCATTCGATCGATGTGGGTGC CGGGGTGATTGATGCTGATTATAGGGGTCCTGTTGGGGTCATACTGTTCAATCATTCTGATCTGGACTTTGAGGTGAAGA TTGGGGATAGGATTGCACAGCTGATCATCGAGAAGATTGTGACCCCGGATGTAGCTGAGGTTGAGGATTTGGATTCCACT GTCAGAGGTGAAGGTGGTTTTGGATCTACTGGTGTTTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0218800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAESHTSNGSEIQEPSPKIPKLHQNDDISNIPPLLRVKKLSDKAVLPARASHLSAGYDLSSAVETKVPARGKALVATDIS ISIPEGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDST VRGEGGFGSTGV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 25 25 - –
PANTHER
PTHR11241:SF9
31 172 142 8.4E-87 –
PANTHER
PTHR11241
31 172 142 8.4E-87
IPR008181
Gene3D
G3DSA:2.70.40.10
33 172 140 2.8E-54
IPR036157
SUPERFAMILY
SSF51283
34 172 139 3.93E-46
IPR036157
TIGRFAM
TIGR00576
36 171 136 3.0E-54
IPR008181
Pfam
PF00692
43 171 129 3.5E-43
IPR029054
CDD
cd07557
55 143 89 1.17456E-29
IPR033704

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004170
Molecular function DUTP diphosphatase activity Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate.
Subterm of
GO:0006226
Biological process DUMP biosynthetic process The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).
Subterm of
GO:0046081
Biological process DUTP catabolic process The chemical reactions and pathways resulting in the breakdown of dUTP, deoxyuridine (5'-)triphosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0218800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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