Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0218800.2

Overview

Field Value
Gene ID LotjaGi3g1v0218800
Transcript ID LotjaGi3g1v0218800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Deoxyuridine 5'-triphosphate nucleotidohydrolase; TAIR: AT3G46940.2 DUTP-PYROPHOSPHATASE-LIKE 1; Swiss-Prot: sp|P32518|DUT_SOLLC Deoxyuridine 5'-triphosphate nucleotidohydrolase; TrEMBL-Plants: tr|V7BAU1|V7BAU1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0218800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:32959292..32967032) extracted from Lotus japonicus Gifu genome v1.2.

ATTTAAGCATGCGTGTCACATTTTCAACCACTCATTATATACTAAAATAGATACGGAATTTTATTTTCCGTATTGATACG GAACTTTAAATTCCGTATTTAATAAAGTGGGGTGCAAAGCCTAAGGGGTGGGGCACCAAACTCAATTCTCGTTAACTGAG ACAACAAGTGAAGAACCCTAAACCTGTGAATCAGAGTCAACAAGCCCCTTCATCATCAGCTTCTGGTTAGTTACTTAGAT CCCTTCTTTTTTGTGTTTAAGAATGCTCATTTTTCATTTTTGTGTTAAAGATTGTTCAGTTCCCTTCTTGCAATTGCTTC AAGTTTTGGCGTTGTGATGTTTGTCGTGCTATACTGCTATATGGGTGTGTTTAATTCGCTGAAAGGTGTTACCTTGTGTT TGATACCGTGGCGGCATTTTGCAATGGCCATTGGTACTGTGGTATAATCTATTGATGCGTTTAGATGCTGTTTGTGTCAC ATTCAGTTCTGGGTATTGCTGTGGGGTATGTTTTTATTTACTTGTAGCTCTTTGAAATAGGATATTGGGTTTCTTAGAAC TACACACTTGGCTTTTAATATGACATTTAGGTACTTGTTGTTGAAATGTTGGAGGACTTGGAAGTAAACATCAAACATGG TTCTTCCTTTGCGTTTTTTATTTGATTTTAATTGTTCGAATTTTTCTGAATTTTGTTTTATATTCAATTTTTTAGTTTTA GACCTAGCTTATTCTTATTCTTATGTTTATCTTTACATTCATTTTTACTCCAATCTCCAACATTGCAGAACGCCCTTTGC CTACACCATCAATTTCACTAGCTAGAATGGCCGAGTCCCACACCAGCAACGGTTCCGAGATCCAAGAGCCATCACCCAAG ATCCCAAAGCTCCACCAAAATGATGACATTTCTAACATCCCTCCTCTTCTTCGAGTGAAGAAGCTCTCTGACAAGGCTGT TTTGCCCGCTAGGGCTTCCCATCTCTCTGCTGGTTATGATCTCTCTAGGTATAGCCTCCTTTATCATATTAGACTATGTT TGGATATCAGTTGGCACCAGTACAAAGAGACGTTAGCACACACTTTGGGATAAAAAATGAATGGAATTTTACTTATGGAT TATGATTAAAGTCCATTCATATTACACTTAACTGGTATCCAATCACATTCTATGTTTATATGTATCAAAATGTCTACTTT TGACTTAGCTTTTTTCTTTCTTTCTGTGTGGTAGTGCTGTGGAGACAAAGGTACCTGCTAGAGGGAAGGCTCTGGTGGCT ACTGATATTAGCATTTCAATTCCAGAAGGAACCTATGCTCGCATTGGTAATTGTAAATTTTCTCTATAAATCAGGCAATT CAGGATTTGTTTGTTGCCGCGTTGATATAATTGTGAGTTTGATTTGCAGCACCACGATCAGGGTTGACTTGGAAGCATTC GATCGATGTGGGTGCCGGGGTGATTGATGCTGATTATAGGGGTCCTGTTGGGGTCATACTGTTCAATCATTCTGATCTGG ACTTTGAGGTGAAGATTGGGGATAGGATTGCACAGCTGATCATCGAGAAGATTGTGACCCCGGATGTAGCTGAGGTTGAG GATTTGGATTCCACTGTCAGAGGTGAAGGTGGTTTTGGATCTACTGGTGTTTAATTAGGATCTTGTATTAATGGGATGTG TACAAAGCTTGCTGGTAAATTGACTAGAAGGACACCTCTTCTGGATTGGTGCTGGTGAAGGGCTCTCTGTAGGAACTTTA ACTAGGTGTGGGTGTTAAGTAATCGTAGTCACAACCTTGCTTTGCATATCCATGAAGTGTTTCTTTCCTGAATATTTACT TACCTGAGACTAAATTTTTTCACTTAATAGCCTTTTATACAGCATGTATTTAACTTAACCATTGAGATAAGAGTTTTAAT TAAGTTGATCAAATGTATAAAATTTAGAGTCTTAAAACTGATTGTTACTTTGGATAAAATTTTAAAATGTAGGTAAATTC AACTATAAGATTACATGTGAATGTCTTATTTAATCAAACATTGATTATTATGTTCTTTTGATTTTATGGTTAGATTTACT AAATTCATATTTCACAAAAGAAAAAAGCATGCAGGTGCCCAGAAAATAAGGAGAAAAGGCATATAAAATTCCAAACCAGT TAATATCTTTTCTCCCTAATGCATTGCAGAAAGCAAAATGAATTAAAAAAATTCACTGATGGACGAATAACAAAACTACC AAAAAAGCATCGCATAATGCTGAAGATAGCAAAAGAAAAAAAATCTTTACAAATTTCAGTTTTTGTTCTTTTTGGCCTCC ATGTTAGTCCCATCTTTGAGAGTCTCTTGTGCATCATTTTCCATTCCAAGACTGAAAAGACAAGCTGCCTGAAGATACAA AGCAGTAGGCCACTCAGGAGATACAGCTTGTGCTTGCATAGCATCCCCCAGAGCTTCCTGTGTCATACCATTCATCAAAT AAGATAAGCAGCGCCTTGCATACACTGTAGGTGACACCATAGTCCCTCCATCTATGAACTGAAAAACAAAATTTGAGATA TATTTATATTTATAGTTGACTCCTATTTGCAACAAGGAAAACTTTTACATTTCAATAATATGCTAGAAAGAACATACATG ACACAGGACAGGACACAGAGATATGGAACAAAGTATTTATGCTGTTGGAAAGTTGAAAATTGAAATCATAATGTGGTTTT ATTCCAATTTTAGGGAAGACTGGCAGACTTTTAGTAGCTTCTTCATTTAAGTATTATTACATTTTCAATGTAGTCCTATT TGGTTAAATGATCCTTTTAGATGTTAAGCAAGATAGTGTGCAACATCACAGTCACTGCAAGTTTGCAACATTAACATTAT GCATAACATCCAATTTATGAAATAGTCCTCTTACTTGCGTGTAGCATTTAATGGCAGTGGCAAAGTCCTTAGCTCTAAAT GCAGTATCACCATGCTTCTTCAAGTTCAAGGTTTCCTGCATTTGACTTGTCCACAATTGAAAGGAAAGCTGCAATTTCAT CATAAAGAAGGATCAACATTGGAGTAGGTAACTGAAAATTAGAGGGAAAAGTGTGTAAATAGAGTTCATGTTCCAATTTA TTTTAGGCAGTGACTATTTGCGCCTCCTATTTTGCTAAGTGCGTCATCCCCAAAACTGAAAAAAGACCAAAATACCCTTC AGTAATTTAAATTAAAAAAAAAACTACCGTATCTTTCCCTACAAACCCTCCCCCCTCTTTCAACCGTATAACCCCTCTTC CTCTCCAACCCAATTTCAAAATTTTCAACCCTCACAAAATCAAGTCTCTCAAACCCACATTAACCATGGGAGGTTGTATT TTGTGTTTTCATTCAGTCCCTCGATTTGATTCTGCCATGGGAGGATGTTTCGTGACTTGCCCGCACTCTAAACTGCGGAC AGGTTTTATGACTACCGCATATTTAAGTGCGGTTAGCCTGTGGATGGTCAATTTTTTTTAATTCTCTCTAAATTTTCTCT GAATTTGCCTTCCGCAGTTTAACTGCGGAACTATTATTCCAACACATCACGTTCCGCACTTTTAAGTGCGGGAAAATCAA TTTTATTCAGGTAGCAGTACCAGACCTTAACACGATTGAAATGACTAAGTTTTTCACTTCCGCTAACAAGTTAGCGGAAG GTATAAATTTCACACTTCCGCACTTATGTTAGCGGGAGCGTGTAATTTGTTTCACTACCGCATGTTTAAGTGCGGGACTA ACCAGTTACGTCGGGAAGTCACGAAATCGCGATGAAAGCTCGGAAAAAGGTAAAAACTTACATGAGTAAGCTTCTATTCT TGACTTGAGATCACCCAAAAGAAGTTGGGAGTGGAGGATTAAGAGGAGGGTGAGGAGGAGGGTGAGGAGGAAGAAGGAGA TGGTGTGTGGGAAGTAAAAATAAAATATTACCTTTTTATGTTTTTTTTACTAAGGGCAATGTTGGAATTTTTAAAAAAGG AGATGGCGGACTTAGTAAAACGGGGAGGCGCAAATAGTCACTGCCTTTATTTTATATCGTATTTAAGTGAGATGAAACCC TCTTGTATAAGTTGAAGATGGGCAAACCTCATTGGCAATTCCTTCATCATCCTTGTAACCAGTCTTCTCTAATATTTCAT GTATGGCAGTTAGATCCAGTCTCAAACATGCTTCACCAAAAGGTGTCAATGATACTGGCTTTGTTGAGGATGCAGTTTCA TTCCGGAGACCCATCAGAACATATGAAGGGACCTGCTTGTTCAAAGGAGAAGTTTTAGTCTTCCTAAGATAGGTATCACA CTTCTCACATTTCTTCAACACAAGTATAGTACTATAGTAGTTAAATATATGTAAACATTTCCTATTCCAAATTGAGTGAA TGGTCAATTTGGTACTTAACGATTTTTCCGTTGGAAAGTTAGTCTCTGAAAGAAGGAAATGCATTCGAAAGTCCCTGAAT GTGTAGGGACTAACTTGACTGACCTTTTAGTTGACAAAACCGTATGGACTAGCTTGACTGACGTTTTACACATTCAGAGA CTTTCAAATGTATTTCTTTCTTCCGGGGACTAACTTTCCAGTGGCAGAATCTTTCAAGGATCAAGTTGATCATGCACTCA TTCCAAATTACATGTTTAGCATTACCATGCATGATAAGCTTTGGTAATTGCTTGTGTATAGATAATAGGTCTAATTGATC TGTTATTGTATATCAATGCTTTGATACCTCTGTTTCTTTCTGAAGTGGCATAAGAGATGCAACAAGGGACTTTGCATTTG GCCTCTCACGACCTTCATACTGTAAGCAGCGCGAAGCCAAACGAACCAACTCAGTTCCATCATCTTTTGAAAAGTGACCC TCTAAGGCAGAATCCATCAGCATCAAAAAGTTTTTGCCACGTATCAGGTCCAGTGCCTGCAAATGAAGAGAAGTGAATTC TGCAGCAAATATAAAATATTTTCACTTCATCAAATTTACCACATCTCTAAGAAGAATCTCAAGTGACTACCCGTTGGCAC CAGAGCTAATGCTTTAGCACTACTTTGAGGTAAAAAGTGAGCGAAACTCTTCTTTTGAATTAGGATGATTGTGATTTCAC ATTATCTCAACTGGTGGACACACACTTATAAACTGTTTAGTACCAATGATCATTTTGTGAGCAAGTGCAATACAAAATTT CTTAATGATGATTTACATGTAAATGACAATATGTCCTACTGCTACATGCTGAATGTGTATTCTTAAGCAATTATATCAGC CATTAACATTCTTGTCTAAAATCAATGGTCTGAACATAAATTAGAGTTTGTTCAGGACTTAATAATGGATAGAAATTAAA ACTTACATGGCTTGGGGGAATATGTTTACCACTCAAGAGGTCTAGCAACAGGGTTCCGAAACTGTAAACCACACTCTCTT GCGTCACTCTACCTGCATATAAGGTCAAATGTACAAAAAAATAAAATTGTCACATACCAATCCATGCAAGCATATGCAGA CTGATTCCACATACGTTTCTCTCAACATGCTTTCTATTTGAGAGAGACCATACAAAAGGAGTATTAACCTTAGGGTAATG AAACAAGAAAAAAAAAAGAGAGAAAGATGTCTTTTACAAGATGATTTTCAACATAAATATCCAAATAATTTAGCCAAAAT TTAATATTCCTAAAACTGAAAACAGAACAATTAAACAAAGCAATATGTTTGCACAAGAGGATGTAAGACTAAATGCATTT TGACAGATAATTTAAAGCATGTAGTATTGCTACTGCAGAGGGGTGTAGAGAGTAGTTGGCTGCAATTGATGCAAATTCGA GAATTTGTAGCAGTTTCCTAGATTTCTCTTATTAAAGTTATGCCAAAGATCAAGGACATGCTCCCATGCATCACACACTA ACATCCTAAGAGCTATACCAGTTCTTAAGTACTCAGGAGGAGTGAAAGCCAAGTTAGTACTGTAACTCTTGCCATCTCTG CTGTTCTTCATGAGCCCGAAGCAAGACAACCTAGGATTGCCATCCTGTTGATACAACATAAAAAGCAAGAAACAAGGATC GATTACAAAGGGAACTTGAAGCATATAGAGCCCGTTTGGATGTGGAACAAAGAGCACATATTGGAGCTTATCCAGTGATT TTTCTAGGTGTATAAGCTTCAATAAGTGCTCTTTATTTCGTATCCAACTGGGATCATGATACAAAGCCCTCATACCTGAT CAAACAAGATCCTATAGGCATTGAGATCATGATACAAACCCCTTCCTTTACTGGTGCAATATTCTAGAGCTTGAGCTAAG TAGAAAGCTACCCTCAACCTCATTGCCCATTTCATAGGCTGTGCCTCCCCTGCACCAAGTTAACCATAATATATTTTTTC CCATGTTCAGAATTCAAAGACCAAAGACAAACTTAATGAAAGACTCGGTGTGTGTTTGGATAAGGCGTTAGCAGAATTGA TTATGGAAAGAACTGATTCTACTTAAATTGCGTCTGACAAACGTGAGTTTAAATGTTATGATTTATGTTGGGGTACCTTT TTGAAAAAGGGGGCTTTGTAGGGTAGTATTATGAAATTCAATTAAAAAAATCTCAGAATTGATATGTTCAGCGCATAAGA AACTATATGTTGTGGTAAGTGAATCCAATTCTTGACCCATGAAATCAATTTTACCGGTACATTCAAACATAACTTCAATG GGTTTAAATTAATTTCAACCAAGTAGAATTGATTCTGTTTTCCAAACATGCTATTTAATCTAACATAGTTGCAAAAAGTT ATAGTGATCACAAAAAACCCACAATGAAAGAGATGTTTAGCCAGAGTTTCATGTGGCATAAACTCTGCTACTAGCAGCCT CTCATCCCCTTCATAGCAGTAACCAACCAAATTGGCCAAACGTTCACTTCTGAGGCTCCCCACTTGTGTGGCTTCTTCCT ACAACCACACACAACACAACATCAAGCTCAATACAAGAAACCAAATACATGAATGGTAAGAGTAAATGAAGCACTGAAAG TGCAAGTGACAAACGATGAATTGGCGAGAATCAGGCCAAGCAAACTTGTTGAAACGTTTGATGGCAATCCACTGTCCATT CTCAAGTTTCCCTTTGTAAACCACGTTTGGAGCTTTCTCACCATGCTCAGAGACTATGTTTTCTGAGGAGAAACCATTTG TGGCGGCCTTCAGTTGCTCCAAGCTGAACTCAGCAAAACTAGGCCACAAGATTTTTTCACCCTTGCCACCATTTTCTGCA ATATAGATAGCATTTTTAAGTGGAACAAGAGGTTCTAGCCAAAAGGGTGTGTGTGTGTGCTGAAAACAAAAAGATAACAA CATAAACCTTGGTCAGAGGATTCAAGGACAGAAGGTTTAAGGTGGGAATGGAACCAGCAGAAGGAGAATTTAGAGCAACG AGCCCCCATGTAAGTAAGTGTAAGGTAAGTTTCAGTTGAAGGTTGAATGACTAATGAAGAATGATCAGACAGTGCTCATT GTTGTGAGCCCATTTGGTCTATGACTCTTATGTGTTGTGTTTGAATGTAAATGGAAAGAGTTAAGGAGTTGGCAATTGAA AAGGTTTCTAATTTGCTGATATACTCAACATAAATACAAGCTGTGTATTGTTATAATGTAAAACTTGCTTGTTTACCTAT CTGGCTTTCAATTTTTTTCTTTCAAGCCTTCCTATTTCTAACTTTCTGTTTTCATCTTTTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0218800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCGAGTCCCACACCAGCAACGGTTCCGAGATCCAAGAGCCATCACCCAAGATCCCAAAGCTCCACCAAAATGATGA CATTTCTAACATCCCTCCTCTTCTTCGAGTGAAGAAGCTCTCTGACAAGGCTGTTTTGCCCGCTAGGGCTTCCCATCTCT CTGCTGGTTATGATCTCTCTAGTGCTGTGGAGACAAAGGTACCTGCTAGAGGGAAGGCTCTGGTGGCTACTGATATTAGC ATTTCAATTCCAGAAGGAACCTATGCTCGCATTGCACCACGATCAGGGTTGACTTGGAAGCATTCGATCGATGTGGGTGC CGGGGTGATTGATGCTGATTATAGGGGTCCTGTTGGGGTCATACTGTTCAATCATTCTGATCTGGACTTTGAGGTGAAGA TTGGGGATAGGATTGCACAGCTGATCATCGAGAAGATTGTGACCCCGGATGTAGCTGAGGTTGAGGATTTGGATTCCACT GTCAGAGGTGAAGGTGGTTTTGGATCTACTGGTGTTTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0218800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAESHTSNGSEIQEPSPKIPKLHQNDDISNIPPLLRVKKLSDKAVLPARASHLSAGYDLSSAVETKVPARGKALVATDIS ISIPEGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDST VRGEGGFGSTGV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 25 25 - –
PANTHER
PTHR11241:SF9
31 172 142 8.4E-87 –
PANTHER
PTHR11241
31 172 142 8.4E-87
IPR008181
Gene3D
G3DSA:2.70.40.10
33 172 140 2.8E-54
IPR036157
SUPERFAMILY
SSF51283
34 172 139 3.93E-46
IPR036157
TIGRFAM
TIGR00576
36 171 136 3.0E-54
IPR008181
Pfam
PF00692
43 171 129 3.5E-43
IPR029054
CDD
cd07557
55 143 89 1.17456E-29
IPR033704

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004170
Molecular function DUTP diphosphatase activity Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate.
Subterm of
GO:0006226
Biological process DUMP biosynthetic process The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).
Subterm of
GO:0046081
Biological process DUTP catabolic process The chemical reactions and pathways resulting in the breakdown of dUTP, deoxyuridine (5'-)triphosphate.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0218800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…