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LotjaGi3g1v0230500.1

Overview

Field Value
Gene ID LotjaGi3g1v0230500
Transcript ID LotjaGi3g1v0230500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Uracil phosphoribosyltransferase; TAIR: AT3G53900.2 uracil phosphoribosyltransferase; Swiss-Prot: sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase; TrEMBL-Plants: tr|I3S7F3|I3S7F3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0230500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:36085990..36092725) extracted from Lotus japonicus Gifu genome v1.2.

AAATGAATGAACTAATTTTTAGCTTTGAGTAAACTGGTTTAGACCCGTGTTCTACTTATCTATGATAGATCCATTTATCC ATTTAAGCCAAGGCCTCAAATCTTGCAGCATATCCTCTTCTTTTCTCTCCTCAAGGACCTTCCTTGAACTCTAAATTCCT GGGATTGCATTCATGGCTTGGTGCCGCATTCATTGCAACCTTAATCCCCTGTTCCCGTCCGATGCGGCGCCTTTTCCGTC CACATGTCACTCTCACTCTCACTCTCACTCTCACCTCTCACTCACTCCTCGAACTTTTCCTCCTATTAATTCTCTCTTCA CATCAAGAAAGGCAATTTAATATTTCCCATTAATTATTTTAATTACATCTATTTTGTTTTTTCCTTTTTGGTTTGTTATG ATTTGATTCTTGTTGTGTATATATACCCTTTTGTAACGCTTATTCATTTGTCTTTCCGCACTTAGATCACTTTTTCCAGT GCTCAGCGCCGCACTTTTGGGGCTGTGAGCTCACACATGACCATGGAGGAGAAGCCCATCTCTGCTGATCGAATGCTCGT TTGTTTTCTTATCTTCTTCTTGTTTTGCATTCTGGGTTTCATGGGGTTTTGCTCTATTTGATCCTGAGGGAAAAAAAGTT TTCTTTTTTGGTGATTAATCTGTGGTGGTTTAATTGGTTGATTAATCTGTTTATTGGGTTTTGGGGTTATGAGTTTTTGC TCTGTTTGATCCTGAGAAACAAAATGGAGGGAGATAAAAAATAATCTTTTTGGTGATTCATCTGTTGTGACTTAATTGGT TGAGTAATCTGTTTATTGGGTTTTTGGCTTCTGGGTTTATGGGTACATTTTTTGTTATCCTTTTTGTTTTGGTTTCTGGG TTTAGAGGCTTTTGGCCTGTGTGGTTCAATGGAACAGAAAATAGGAGAATGGAGCTAAAAGATTTTATTTTTAGGGTGAT TTATCTGTGATGGCTTGTTCGGTTGATAATGTTGTTTGTTGGGTTTTTGAAGGTGTATGTGCCTCCACATCCGTTGATCA AGCACTGGGTTTCAGTTTTGAGGAATGAACAAACTCCTTGTCCCATCTTCAGTGAGTGAATAAGTTTATTTTTACAGTCA ATGCTGAACATTGACTTTGTTCTACTGCAATCAACTTAGAAACAGCTTCATCACTTTAATTAACTTAAATAGCTACTTTC CTTTTTAATGGTTAATGGTATTGTTGCTTCTTGACAAGCACACCCAACTGGGAGGTTTGATTGAATTTGATAAGGTTTAA GTATTGTTGAACTGTTGATTGAGGGATGTTAGTCATGTTACTAAGTGTGGGAAGAGTGCATGCTTTATTACTACCAACAT TTAATCTTATTTGAATGGCTTAGTGGGGAGTCTGCTTGGTTGTTTTTCAAATTTCATTGTTCACACTCAAACTTATCTTC TACTCTGTTATTACTAGTAATTTTCATAAAAGAAAATCATGCCATTAAGTATGTTGATGGGAACTTTGAACTGGAACAAC TTAATTTGAGCATCTTGATTATTTTCAAGGGATAGACTTCTGACTTCTGAGCATGTAGTATCAATATGTCTTCATAGAGA ATCTGGTTTTCCTTTAACCTGAGATTCTTTTGTTTAAAAAACAAAACTAACTAAACTTTAGGTGGACTTGGCTTGAATTG TGGTATATGACGGTTGATTTGAAAGTTGACACGTGGTTTTTGATACTGTAGAAAATGCAATGGCTGAGCTGGGAAGGTTA CTTATGTATGAAGCTTCAAGGGATTGGTTGGTTAGTTCACGTCTCTTCGATAATTCTCATATGTTTCACCTTTTCTTTTT CCTGCAATATAATTTAACTTTGTTGCAATATTGTTTTTATTATCTAATTATAAAAGCTGACAAATTCAAGCCATGGGTTT TCATATGTACGAGGGCAAACCAAAAGGGAATAGGTTTTAACTTTATTTAGCATTCCAAAGAACTAATATAATTGATCCAA ATTTTATTTTTCTTTCCATGTCTATCTAAATGTGTCCTGAGGTATGTGGAGTATCAAGTTTGTTCCAGACTTCTAGTTGT CTTGCTCTAGTAGCACAATCAAATGACTTTTAGGTTAGGGTTATGAACTTATGATGTGTGTGTGTGTGATGGTAAAATGT TCATAAATGGGGGGGAGTAGAAGGCTCATAGGGGGGGGTATCTGAGGGCAAAGATGGCTCTGAACCCTGGGTCAAATTGA ATAGGTACCTAGCTAGGCTACGGTGGAAAATACCTGTGGAATCTTTGGTTGTTGCTTGTTAGGTGATAGGTCTATTGGTA AATTAACATAAGAACTGATTAGCATTTTAAGAAGGATAGAATTCTTGAAGTAGATTAAAAAACTAAGGAAAATAGTAGAG GTTCAGAAGATTACAGATTTAATCTTGGTTAGGCATGACGCATAATATATTTCATATAAAAGAGACCGAGTAAATAACAC CATCTTAATAAAGGAGAATCAAGTTTTTAAAATTCTGCCTTGTGGCTGGTCTTCCTTCTGATTTTAATACCTTTTTTTGA ACAAGAACAATAACGAATAAATGTTATATTTTGAAACAGCATGTACATTATTGCATTATACTATATAAGAATTACTTCAA AAGATAACAAACCTGGGCTTTAACTAAATCAGTATTTGACGATCTAGCTAAATGCAGAATTTAGTACACCCCCCTAATTT AGAATTCAAATCATAAATCTTTTTCTTCAACTCAGCTATCTGAGTTTCCCAGTTTACTCTCTCCTTGTTTTGTGTTTTGC CTGAGTTTCACACTTACGTCTCTAAAGAACGTATCTGGATTTTCATATTCCATGTGCAGAACAATACATTGCCAAACATT TAGATTTTCAATTTATTGCATATTCAATAAAATTTGAATCTTCATTTATCCTTTTTAAGGAAAATTTCATCAATACCTTG CTACAAAATCTTGAATTTTATAGTTATTTCTTTTTATAAATGTAGTTCTTAATAGCCAAAAGTTGTCGAAAACTGTCCAG GCAATGTTATTCTTAAAATTAAGCTTTTCTTAAATGCTCTTGTCTGTTGCACCACTCTCTATGAGACAAGAATCTAGAAC TTGGTACTGATTACAAGTTGTGGTGATGGCTTGAATTAATTGTTTAAATTTTTGATGTTGTTTGATATCTCCATCCGATA ATTTTGTCCTCCTATGGGCAGACTATTGTTCATTGATATACATTTTTATTCTTTTCTTCTTTGTTTTCATTGTTTTCAGC CCACTATATCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTT AGTAACATACTGCTCTCACTATGTTTGGAATTAAATATATATATATGTATATATATATATATATATATATATATATATTC AGGAGTTCTTATGGCCTTTTAGTTACATACTTCCATTCTGCATATAATGATTGATATTTTCTTTACTACGCTCCCCAAAC TTGCTTTTAAATGGATCAAACATGAATTTGTTAAAAAAATATCATATTTGGTTGTAATATACTAAAATCAGTTCTGTTTC TAAAAGAACATGTAACTAGAAGTAAGGAAAAGTAGCTTGTGTTAGGTTGAATTTTTTCACTGTTTACTACAAACTTACTT TTAAAATAAAAACATTGAAACACAAATCACTTCACCTGAAACTCAATTCCAAACAAAATCAAATTTGCAAAATCAATGTC TCGTATAAAATCAATTCTGCAGATGCCCACTCAGACACTCAATTATACTAAATTGTGAAGCATTTCAAAGATATATTCAA TTCACGTAACCAAATCCATGTTCATATTTTTGGTGATCCTACAATGCTATTAATATTGTTCATTGCTTTCCAAAATAAAG TACTTTAGGGGTCTTATCAATTTGGTTGTGTAAGTGCCTTTGTACAAACAATGATTTTTTACCAGATTTTCAGGTAATTC CAATCTTGAGAGCCGGTCTTGCGCTTGCCGAACATGCATCATCGATCTTGCCCGCAACAAAAACCTATCATCTAGGTATT GATACTTGTGCTAGTTATCAATTTAAGAGGATGCAGTCATGCAAATGTTTGTTACTCATTGTTTGGTACTAGTTCATTTT AATAAGATGATGGCTTGTTTAACAATAGTTACTTCTATGAATGCACTTATGTAAACCTAGAATACATTTCTTGTTCGTTT CCTAAATTGATTTTTTTTTTGCTTCATTTGAGCAGGATTAAGCCGAGATGAGGAAACACTTCAGCCAACTATATATTTGA ACAAGTAAGAAATCTATATTTGAAAGAGAATGTTTTTTCTTAGCTGTTTTTCTTTTCTTGACGCTGGCATGGCTTGTTGA AGATGCAGCTGAGATCCATAAAGTCTCACCAATGCTTCTCTTACTTTTGGCTTGTTATACTGAATGCTAAAGACGCGGCT GAAATCATAAGATATTGCTTGTTACACACTCCTATTTTTGTTTTCCAGGTTACCTGACAAATTTGCAGAAGGATCTAAAG TATTTGTTGTTGATCCTATGCTAGCAACAGGTACGTGCAGTTAGATGTGTGGGAGTTGAAAGTTAGGGGTGTTTTACATA TTGAATTGAGTTGTCTCACAGTCAAATTCTTTGTGTTTGTATAATGATTACTTTAAGTTAAACGCTAACAGAGGCCAGAA CCTCCTTTCACGTTTTTTGCACAAAAGAGATCACCCTAGCATGCACAAAAATATTTTTTTGCAAGGTTGCACAAGGGCCA TTTGACCTCCTCCCACATATTATCTGGTTTTTATGGAATTTTGAATTAAAAAATTAATGTGTTTCAACTTTTGGCCCAAA TTTATTCTAAATTATGTTAGGACCCCACCTCTACCCCACCACTTCGCCACCCCTCTCCATCACCCTCCCTCCCGTCAACC TCCTCCCTCTGCCATAACCACGTCCACCTCCTCTCCACCCCTCCGCGTTAACCATGGCCACCCCCTTTGATGTTCTTTGT CCCACAACTGATAGCCCAACAATTCTTTTGAAAAAACTCAGTTGGAAAAACTCATCTTTCGGCAATAAGGTCCTCAGAGA ATGGCAGAGGCCGAGGAGGTTCAGTGGAGGGAGGGTGGTGGAGAGGAGGTGGAGGAAGGGAGTTATGAGAACACTTTAAG TGGCAGATGGAAAGACTCTCCCATAAAGTGTTCTCATAACTAGCATGAGCGTTATCATTACTTTAAGTGTTCTCATAACT CATGTTATTATTTATGATTGAGATTTTGTTTTCCTTATGAATTGCAGGTGGTACTATTGTGGCAGCCCTGAATCTCTTAA AGGATCGTGGGGTTGGCAACAAACAAATTAGAGTGGTAGGGAATAGTTTTTATATTCAGAAGCTAGAATGCTTAATAATC ACAATTCTCATAATATTATTAATTCAATGTACTTTGTTTTTGTGTGCTTAATTGGTTTAGTTTAGCAATGAGTAAAAAAC CCCAGATTCTTCTTTATGCATTATGCCATGCATGATATGTTTTGTAAAATTTGCTACATTTTTGTGATTGAAATTGTCAA TACTCATGCATACATGTGCAATCTAATTCTCTTATCAATTGTCTAGTAACATGATTCATGGCAATGCAGATATCTGCTGT AGCTGCCCCTCCGGCGCTTCAAAAGCTGAGCGAACAGTTCCCTGGGTAGTCTCAAAAACTTCAAATCTATTCACTTACTT TGAAGCAATGGGTTCTAATCATAACATTTTACAGGCTTCATGTGTATACTGGAATAATTGACCCTACCGTTAATGACAAA GGGTATGTTCCTCCCAACATTATAATTCAATTTAATTGTTTATTGGTAGTTAGGTAATGCAGAGAATCACGTCATTGTTG AATTTACATCTCTTGTGTAGGTTTATAATTCCTGGTCTTGGAGATGCTGGGGACCGCAGCTACGGTACATGATGATACAT GAATATTCATTTGCTTAATCTTTTTATCAAGTGGCCCGCGTTAGGGATTTTGGTTATTGTTAATTGAAATGCATGTGTTG AAACTCCTAATGCGAGAATTGGCAAGTATCTAAAGTTTGTACTAGAATCTAGTATTCCAATCATTTGATTATTAGATTTT TTTTTGGGTCTGTTGATCATTAGAATTCTTATTCTTTTATTGAGGGATCTTCATCCTCAAAGATTCATAGAATTTGATTC ATGCAAGAAATGAGGGATTATTTTTTACACATTCCTATTGTTCACACATTCTTAGGTTATATTTTTATGGCTTAATTGCA ACTTTGGTCCCTGACATTTATAAAAGCCACGATTTTGGTCCCTCACCTAATTTAATTACAAAAATCGTCCCTCACCTAAC ACTCTGTGAACAAAGTTGGTCCGACCGTCAATTTTTTAACGGAAGAAGCTTATGCGGTGTTTGAAAACTTAGGTGGAAGT GCCACTGGAGAGAGGGAGGCACATGCCTCTACATCTCAGAGGAAAAAACAAAAAAACTCAGAGGAATAGCACACAACCTC AATCCCAGCGTTCCAACAACTAGGCCTCCCAACAGCAAAGCTTCACTATGAGATAAAAAAAACAGCCGAGAGGAGAGGAA AAATTGATTCTGACGCCAGTGGCACTTCCACATAAGCTTTCAGACGCCACGTAAGCTTCTTCCGTTAAAAAATTGACGGT TGGACCAACGTTGTTC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTGGTGCCGCATTCATTGCAACCTTAATCCCCTGTTCCCGTCCGATGCGGCGCCTTTTCCGTCCACATGTCACTC TCACTCTCACTCTCACTCTCACCTCTCACTCACTCCTCGAACTTTTCCTCCTATTAATTCTCTCTTCACATCAAGAAAGA TCACTTTTTCCAGTGCTCAGCGCCGCACTTTTGGGGCTGTGAGCTCACACATGACCATGGAGGAGAAGCCCATCTCTGCT GATCGAATGCTCGTGTATGTGCCTCCACATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAACAAACTCCTTG TCCCATCTTCAAAAATGCAATGGCTGAGCTGGGAAGGTTACTTATGTATGAAGCTTCAAGGGATTGGTTGCCCACTATAT CTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATC TTGAGAGCCGGTCTTGCGCTTGCCGAACATGCATCATCGATCTTGCCCGCAACAAAAACCTATCATCTAGGATTAAGCCG AGATGAGGAAACACTTCAGCCAACTATATATTTGAACAAGTTACCTGACAAATTTGCAGAAGGATCTAAAGTATTTGTTG TTGATCCTATGCTAGCAACAGGTGGTACTATTGTGGCAGCCCTGAATCTCTTAAAGGATCGTGGGGTTGGCAACAAACAA ATTAGAGTGATATCTGCTGTAGCTGCCCCTCCGGCGCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATAC TGGAATAATTGACCCTACCGTTAATGACAAAGGGTTTATAATTCCTGGTCTTGGAGATGCTGGGGACCGCAGCTACGGTA CATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAWCRIHCNLNPLFPSDAAPFPSTCHSHSHSHSHLSLTPRTFPPINSLFTSRKITFSSAQRRTFGAVSSHMTMEEKPISA DRMLVYVPPHPLIKHWVSVLRNEQTPCPIFKNAMAELGRLLMYEASRDWLPTISGEIQSPMGVASVEFIDPREPVAVIPI LRAGLALAEHASSILPATKTYHLGLSRDEETLQPTIYLNKLPDKFAEGSKVFVVDPMLATGGTIVAALNLLKDRGVGNKQ IRVISAVAAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE
SignalP-TM
1 18 18 - –
PANTHER
PTHR10285:SF160
57 293 237 6.1E-114 –
PANTHER
PTHR10285
57 293 237 6.1E-114 –
Gene3D
G3DSA:3.40.50.2020
77 294 218 2.4E-70
IPR029057
TIGRFAM
TIGR01091
85 294 210 3.2E-68
IPR005765
SUPERFAMILY
SSF53271
85 293 209 4.85E-61
IPR029057
Pfam
PF14681
87 294 208 5.2E-67 –
CDD
cd06223
150 270 121 3.10731E-18
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004845
Molecular function Uracil phosphoribosyltransferase activity Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.
Subterm of
GO:0006223
Biological process Uracil salvage Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0230500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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