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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0253100 |
Transcript ID | LotjaGi3g1v0253100.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Trehalose-6-phosphate synthase, putative; TAIR: AT1G06410.1 trehalose-phosphatase/synthase 7; Swiss-Prot: sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 7; TrEMBL-Plants: tr|I1LSH8|I1LSH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0253100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:42677499..42681453) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGTCAAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCCATGGGGCGGGAGTCAAAGGAAAG AAGGCGGATGCCGAGGGTTATGAGTGTCCCTGGGATAGTCTCAGAGCTGGATGATGATCAGGCTGTTAGTGTTTCTTCTG ATAATCCGTCAACTATTTCTTCTGATCGAATGATCATTGTAGCAAACCAGCTGCCTCTGAAAGCAAAGCGGAAAGAGGAC AACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGTTTACCAGAAGATATGGAGAT CCTTTATGTTGGGTCTTTACGTGTTGACATTGATCCAGCTGAACAGGATGACGTTTCACAGTATTTGTTGGACAAGTTCA AATGTGTCCCTACTTTTCTACCCCCTGATGTGTTGGATAAATTCTATGATGGCTTCTGTAAGAGGCAGTTATGGCCACTT TTCCATTACATGTTACCATTTTCTACAGATAAAAGCCATCGTTTTGATCGTACTTTGTGGGAAGCCTATGTTCTGGCAAA TAAGCTTTTTTTTCAAAAGGTAGTTGAAATAATCAATCCAGAAGATGATTATATTTGGATTCATGATTATCACTTGATGG TGCTGCCGACTTTTATTAGAAGGCGTTTTAACCGGGCTAAGATTGGATTTTTCCTACATAGCCCCTTTCCTTCATCAGAG ATATATAGGACTCTTCCTGTCAGGGAAGAGATACTGAAAGCTTTACTGAACTCTGATATCATTGGATTCCATACCTTTGA CTATGCTCGCCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGG AATATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTCGGGATTCACATGGGTCGGATTGAATCAGTTATGAGAATG GCAGATGAGGAGTGTAAGGTAAGGGAGCTTAGACATAAATTCGCAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGA CATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCCAAATGGCAGGGAAGAGCTG TTCTGGTCCAGATAGTTAATCCTCCAAGGGGTAGAGGGATACACCTAGAGGAGATACACACTGAAATACAAGAAAGCTGC AGCAGGATCAACAGAGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTGCTGAAAA AGTTGCCTACTACAGCATTGCTGAGTGTGTTATTGTCACAGCAGTAAGGGATGGGATGAACCTAACTCCTTATGAATATA TTGCTTGTAGACAGGGATTATCTAGTTCTGAATCAAGTTCCAATGTCTACGACGCAAAGAAGAGCATGCTGGTAATATCA GAATTTATTGGGTGTTCTCCGTCACTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCCGAGGCAAT GAATGAGGCCATCTCAATGGGTGATGCAGAAAAACAGTTACGGCATGAAAAACATTACCGATATGTAAGCACTCATGATG TGGCATACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAAGAAAAGATGTTGGGGAATA GGTCTTAGTTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATTCTATGGTTTCAGCTTA CAAGAGAGCAACAAGCAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAA GCACGGAAGTCATCTCTATTTTAGAATCACTTTGTGCAGACCCCAAAAATGTAGTTTTCATTGTTAGTGGACGGGGAAGG GATAGCTTAAGCGACTGGTTTATCCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGGTGTGATCT CTCTCTGACATGTCATCTATTTTCTTATGCTTAATATTGATGTTCAGAATCACATTTTGCACGTGTCGTATGAAAATTAA ACATCTTTTAGGCACCTTCATACAATGATCTTATGCTAGAGTTGGAAAGTGCCATTTCATTTTGTCTGGATGCACCAAAT TAGAATAATTTCCTTCTGCTAAACAAACCCATAAGATGGGGGTCAAATGGCTTTTCAAGTCAAATTTGATAGTGTATGAT ATAATGTGATTTGAAATCCAATTATATATGGTTATGCAAATGCTGTTAGTAACTCATCCTACTCTGTAGTTTAAACCTGT GTTGAGGGAAGAAGTTCCATATAAGTGGTACTCTATTGCTGAAAATGTTTTTCACTACCTCCTCTATGTGTGGAATATAG ATCTGCTTATTAATCAAATCTAGAAGTATATTTGCACTTTGCGAACATATAATTTGTCGAATGTTTTCTCTCTTGTTCTA TTGTCCTTAAATTTTGTCTTGTGTTCTCTGCTTTTACATAGCAATTCGTTTTAAAGGTTTGAGCATTTTTCAGATGGTCC GAGAGTGAAGAATGGGAAATTTTAGGTAAGTGCACTGAATTTGGATGGATGCAGATTGCGCAACCTGTAATGAAACTATA TACAGAGGCAACCGATGGTTCCAGCATTGAACGGAAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCAGACCTTGGTT TTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGC CAGTTTATTGTTGAAGTGAAGCCTCAGGTATGCATAATCTTCTAAACGATTTCTCTGTGAAGCGAATTTTACAATTGATA AATATGAAAATCTCCTTTCAAAAAATGCTTTCCTGGGTATGAATTTCTTGTATACGTCATACTGTGGGAGAATTTAGTTT CTTTCAATTTTCATTTGCTACATTTTATCTGACCCTTCTGCTTTCTGGTTTTATTTCTGATGGTATGCTGACCCATATAC AATATTAAGTTGGCTTCTGAAGTTTAGAAATCATCAACCTTTAAGATTATTTCTTATAAGCAGAGGGCTTGGGTGAGGTG CAGAGAACTGATTAATGCTTCATTTGCAAATTTATTGTTGGAACATGATCTTTTGTGTACAAAATTGGTGTAAATAGCGG TTCGAAATGTTATGATGTCGAACTAGGGTAAGATGAGACTTTTTGTTACCAAAAAGCAAATAGCAAAAAGATATGGAGGA ACTTAGAACGGTTAACTAATGTGTTCTTAGTCTATTTGGTTACCCCCCAAGCATATATATAACAAGAGAAATTTCCATCC ACTGGATACAAAAACCTGACCTATTTCATCCTCGTATGAGATATCTAACATTCTTAACATGGCATTAGAACTTCTCTTAC ATTCGGGTTCGACAAGCTTCCTTACTTTGTATATGCTGTTGAAGGAGTTGTTTTGAAGCAACTTGGTGGTTACAATTTTC AACTTGGTGGTTATCATATAATTTTGGCATGAACTTATATAATTGATGTGCTAGATAATTATGCTGCATCTTTATGGAAA AGGACTGATTCATTATATGTCATTTGCTTTGCAGGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTCTCATCAATGG CTGGGAATGGCAAACCAGCTGACTTTGTGCTTTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGG AGTGCAATCTCAAGAAATATTCTTTCCCCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAACCAAGCAAAGCAAA GTATTATCTGGATGATACCTTTGAAGTAATAAACATGCTAGAATCTTTGGCGGAAGAATCAGATTCTTCTCCTTACATAG AAGAAACTGGGGATTCCTCTTGAAGGCAAGTGTGA
CDS sequence (LotjaGi3g1v0253100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCAAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCCATGGGGCGGGAGTCAAAGGAAAG AAGGCGGATGCCGAGGGTTATGAGTGTCCCTGGGATAGTCTCAGAGCTGGATGATGATCAGGCTGTTAGTGTTTCTTCTG ATAATCCGTCAACTATTTCTTCTGATCGAATGATCATTGTAGCAAACCAGCTGCCTCTGAAAGCAAAGCGGAAAGAGGAC AACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGTTTACCAGAAGATATGGAGAT CCTTTATGTTGGGTCTTTACGTGTTGACATTGATCCAGCTGAACAGGATGACGTTTCACAGTATTTGTTGGACAAGTTCA AATGTGTCCCTACTTTTCTACCCCCTGATGTGTTGGATAAATTCTATGATGGCTTCTGTAAGAGGCAGTTATGGCCACTT TTCCATTACATGTTACCATTTTCTACAGATAAAAGCCATCGTTTTGATCGTACTTTGTGGGAAGCCTATGTTCTGGCAAA TAAGCTTTTTTTTCAAAAGGTAGTTGAAATAATCAATCCAGAAGATGATTATATTTGGATTCATGATTATCACTTGATGG TGCTGCCGACTTTTATTAGAAGGCGTTTTAACCGGGCTAAGATTGGATTTTTCCTACATAGCCCCTTTCCTTCATCAGAG ATATATAGGACTCTTCCTGTCAGGGAAGAGATACTGAAAGCTTTACTGAACTCTGATATCATTGGATTCCATACCTTTGA CTATGCTCGCCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGG AATATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTCGGGATTCACATGGGTCGGATTGAATCAGTTATGAGAATG GCAGATGAGGAGTGTAAGGTAAGGGAGCTTAGACATAAATTCGCAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGA CATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCCAAATGGCAGGGAAGAGCTG TTCTGGTCCAGATAGTTAATCCTCCAAGGGGTAGAGGGATACACCTAGAGGAGATACACACTGAAATACAAGAAAGCTGC AGCAGGATCAACAGAGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTGCTGAAAA AGTTGCCTACTACAGCATTGCTGAGTGTGTTATTGTCACAGCAGTAAGGGATGGGATGAACCTAACTCCTTATGAATATA TTGCTTGTAGACAGGGATTATCTAGTTCTGAATCAAGTTCCAATGTCTACGACGCAAAGAAGAGCATGCTGGTAATATCA GAATTTATTGGGTGTTCTCCGTCACTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCCGAGGCAAT GAATGAGGCCATCTCAATGGGTGATGCAGAAAAACAGTTACGGCATGAAAAACATTACCGATATGTAAGCACTCATGATG TGGCATACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAAGAAAAGATGTTGGGGAATA GGTCTTAGTTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATTCTATGGTTTCAGCTTA CAAGAGAGCAACAAGCAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAA GCACGGAAGTCATCTCTATTTTAGAATCACTTTGTGCAGACCCCAAAAATGTAGTTTTCATTGTTAGTGGACGGGGAAGG GATAGCTTAAGCGACTGGTTTATCCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTTTGAGCATTTTTCAGATGG TCCGAGAGTGAAGAATGGGAAATTTTAG
Protein sequence (LotjaGi3g1v0253100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSRSYTNLLDLASGNFPAMGRESKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISSDRMIIVANQLPLKAKRKED NKGWSFSWNEDSLLLQLKDGLPEDMEILYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPPDVLDKFYDGFCKRQLWPL FHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRAKIGFFLHSPFPSSE IYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRM ADEECKVRELRHKFAGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPPRGRGIHLEEIHTEIQESC SRINRVFGRPGYEPIVFIDRSVPIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGLSSSESSSNVYDAKKSMLVIS EFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMGDAEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLKKRCWGI GLSFGFRVVALDPNFKKLSIDSMVSAYKRATSRAILLDYDGTVMPQNSINKSPSTEVISILESLCADPKNVVFIVSGRGR DSLSDWFIPCKKLGIAAEHGFEHFSDGPRVKNGKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 661 | 661 | 0.0 | – | |
PANTHER | 1 | 661 | 661 | 0.0 | – | |
Gene3D | 55 | 321 | 267 | 8.2E-76 | – | |
Pfam | 63 | 546 | 484 | 2.3E-179 | ||
CDD | 63 | 546 | 484 | 0.0 | – | |
SUPERFAMILY | 63 | 550 | 488 | 9.42E-150 | – | |
Gene3D | 322 | 531 | 210 | 7.2E-75 | – | |
Gene3D | 592 | 671 | 80 | 2.3E-11 | ||
SUPERFAMILY | 593 | 670 | 78 | 4.01E-11 | ||
Pfam | 596 | 663 | 68 | 1.9E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi3g1v0253100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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