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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0260700 |
| Transcript ID | LotjaGi3g1v0260700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT1G29000.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q9SHQ8|HIP4_ARATH Heavy metal-associated isoprenylated plant protein 4; TrEMBL-Plants: tr|K7MFV2|K7MFV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0260700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:47609442..47614488) extracted from Lotus japonicus Gifu genome v1.2.
CTACCACTAGCTAAACCAACAGAGAAATTTTGTAAGGAAACTTATATAGTACTAAAATTCCAACACAACTATGTTTATCA CGCTTTTGTTAACCAATCTAATGGTCATGCATGATATTTAATTTGATTCATTTTTCTTAGTGTTTCTTTCAGCCTCTCAA GAGCCATCCTTTCTCACAATAGGGAACAATGGCAGACGGGAAAGAAGAAAAGAAAGATGAGAAGGGAAAAGATAAAAAGG AAGGAAAGGAAGAAAAGAAAAAAGATGAAGGAAAAGAAGAAAAGAAGAAAGATGAAGGAAAGGAAGAAAAGAAGAAAGAT GACAATGAAGTTATCACTGCTATTTACAAAGTTAACCTGCATTGTCAGGAATGTGGGAACAAGATCAAGAAGCATCTCAT GACTACTCAAGGTATGAACTTATTTTGAGGCTTAATTAATTACATTTTTGGTCTCTATTGTTTCCAGAATGCACGATTTT GGTTTGTATGGTTTCAAAAATTTGCTCAAATTAAGTCTATTTACTTTCAAAATTGAACAAATTTGGTCCAAAAATTAATG ATTAATGAAAAAAATTTATATGGGTCTTTTTTTTTTTATGTAAGTGAAAATTTATGACGATTTGTCACTTTTTTTTTTTG TTGAAGACGATTTGTCACTTTCAACATTAAAAATTTGTGATATTTGTCAATTTTTTTATTAGCTATTGGATGAAGAGTTA ACATATGGACTAAATTTCTTTAATTTTAAAAGCAGAGGAATTTCATTTCTTCTTTAAAAAAAGCAGAGGAATTTTAATTT TCACAATCAAAACCATAAGAACCAAAATCAGACATTTCTAAACTAAATATTGACCAAAAGAGTAACTAAATGTTATTTTA ATTATCTTTCAAAAAAATGTTATTTTAATTAATCTTTTTTATGTGATTTATGGGTTTCTTTAGATTCATGATTTTAGACT TCCTCTTGTAACCAAAAAATTATGATTTTATTTATCCATCAGTGACCATTTATGACTTTTTTCATTTATAAATGGAATTA ATACATGTATATGTAATGTTTGCAGGGGTACAGACTGTGGATATGGACATTGAGAAAGGAGAAATCAAGGCAAAAGGAAA AATAGACCCTCTAAAAATCTTGAAGCTTATAGAGAAGAAGAGCAACAAAAAAGTTGAACTAATATCGCCAAAAGTGAAGC CTAAGGAGGTTACTACTAAGGATGACAAAAAGCCAAAGGAAACCAAAGATGTAAGTTATTCTTTCTTCATAATCCGGATA AATTAAGAGCTCATTTAAATAGATGATGGAAACTATGAGAACGGGGAAAATAACTTATTCTAATACCCAATTTTTTTTTT GAAGTGACAACATGCTAGTTGCTACTTAAAAAAAAGTGCTTTGCGATTGTTATTCTCTCCCAAAATTTTAGATCGCAACT TTTAATCATATATTAAAATTTAATGGATGTGCACTCTTAATGTAAAATTCTTTACCTAAACATTTAATGATAGGTTGTCA CAACCTAACATAAACTTTTAATTTATTTAAAATAAAAAATGTAAACTCCTTTTAAATATGCGGCCTCAAATTATTGGATA ATGCTAGTGTAATTTGTAAAGATGTTGTCATTGACTTTATTTGTTCTTCCAAAAAAAGACTTGTCATGAACTTTGGACTG GATGGTTAGGTCCCTAACGGAAGACTAGGTTGTCCTCTTAGGAGTGGGCTGGACAGATGAAATCTGGGCATACAGACTAG AAGACTAAGGTAAAGACTCACTCCATGACGAAGACATCCGACTGTCTAGCTACAAGGAAGCAAGACGATCGTCGATTGCG TGCCTGGTCAAGGGTCGAAATTTTCCTTGACCAACGCCACTTGTTAGGGAGTTAGCCGATTGTTGAAGCGTGTGAATTAG GAGAGAGAAGAGCAACCATGACCAACATTACCTTTACACACACACACTAGGAGAGAGAACACCGACTATGGGGGGAGGTA GCCGAGCGACGAAGCACATGAATTAGGAGAGAGAAGACCACCATGGGGGAGGTAGCTGACCGGCGAAGCACATGAATTAG GAGAGATAAGGTAGACCGTGGGGGGAGTTAGTCGACCGTTGAAGCGCTGAATGAGGATAGAGAAGACCAACCAGGACTAA CATTACCTTGCATGCACTAGGAGAGAGAAGGCAGATTGTGGAGGGAGGTAGCTGACCTCTGAAGCGGACATCAGAGAGGA CCACGAAAAGTTCAATCCGCAAGAGGACGCGCAGTGTGGAAGGAGACAACGTGACTTGAAAAATAAAAACTATGACATGA ACACTCACCCGACGCACCAAGTGAAGAAACAAGCGGATAGAGGGGAAGAGAAATACATGACGGAAGAGACAAAGGGACGT TTAACTGTGGCGCAGTGGCGCACACAAACTCTCTTAAGGCTTTGCGGCTAAAGCATTTAACCACAAGCCTTGGGGGGTTG TGGACCGTCATGGACTTTGTGCTGGATGGTTAGGTCCCTAATGGAAGACTACGTTGTCCTCTTAGGATTGGACTGGGCAA ATAAAGTTTGGGCATATAGACTAGAAGACTAAGGTAAAGGCCCACTCCATCACGAAGACATCCGATCGTCTGCAAGGAAG TAAGACGACTGTCGATTGAGTGCCTGATCAACGGTGGAGACTTCTTTTGACCAACGCCACCTGTCACGGAGTTAGCCGAC CGTGTAATGATTGCGCTTCCTTGATGGGCGTGATTGGTACACAAGTCAACCGACATTGTAATAATAGCTTCAGCTAGGGT TTGGAGCTCGACCCACTATAAAAGGGAGGCTTCCGTTCTTCAATGTATCCCATCTTCTACCCCTTGAAATAATACTCCAT ACGTTCTTAGTCTTTTATGCTTCCGATCCCCTCTGATTTCCTTATCGGAACAAGACTTCATTCGAAAAGTCTTATTACAT AGTATACACGTAGGGGCTAAATAATTTATATAATCAGACTTTACTGGTTACAAATTGATTCATGTCGCATTCATAACATT GAAAAATTAGTTGTGTCGTGACTAAGCTGTATGGTGACTATTCTAAAGGAAAGTATCTAGAAGGTTACAAAGAATACTCT GATTAGATTTATGCCATTCAGTCATTCACAATGTTTATGAAGTTTTTTTTTTTTGAAAGTCACAATATTTATGAAGTTGA ATTACTTCACTTTTTTAATTTTTTTTTTAGAAAGTAAAAGATTATATTTATCAAAAGGACATGAGAGCGGGCTCTCAAGA AAAACACAATAAAATCCCTGAACATTCTTATAAACTTTTTGTTCACTTTAGAATAAAATTGTAAGATAATCATTTGAATT TAGTTAGCAAAAGGTATTTTTAAAAATTAAGTTGTTATATTGATATAAGTGACAAAAAAAACCAATAATGATATGTACAC ACCTCATTTTCTAAACACTTTATTTTCACCTGGCAAAGGCTAGGGTACGTCACCCTTTCAAATGATGTATGACTGCATCA CCCACATTTGACAAATTTACCCCTAAAGTAGTCTTAAATTTATAATCTATGTCATTGCACTTATTTTTTCTTCTCCCCTT TTCTTCACAAATCTGCTCCGATTTCTAATTTTTTATTTTTATCTCTCATTTCATCTTCTATCACATTAATACATCACATA CTTTCTCTCTCTCTCTCTTACTTTTTCTTTTCTTCTTAATTATCTCGCTCCTCATTGAGTTATGATACATACACACTTCT CACCTCTTTTCCACATTTATTTTCTATCTATTTTTCTCTTCTTTATCAATCAAATCATCTATCACATCTTTACTTTCTCT CTCTTTTCTTCCTATGTGTCTCATCATCCACTTCTTTCAACCTCTACTTTGAGGTGTGAACCAAACATTATTCCTCCTCA TTCCACCTCTCTTAGAGGTGTGAAAGTAACATTATTCGTAGACTTATTGAATCTACACTACACTTTACACATTTGTATAA AATTTGGGACTATTTATAACTAAATTTTTCCTTGTGTGATTTAAAGCCAATTATCCGCACTATCACGGTGAAGGTTGACA TGCATTGTGACAAATGTGAGACTGACCTGAAAGGTAGATTAATAAAGCACAAAGGTAAGTACTCAAGGACTGTAATGGAA GAATTTCTGTATATATGAAAAATTCCATTTAAAATGCAAGGACTTTGATGATATATATGATGAAATTATTACAGGTATTT TCAATGTGAAAACCGACAAGAAAGCTCAAAGTGTGACAGTTGAAGGCACCATTGAAGCAGAGAAATTGACATCATTTTTG AGAAAAAAAGTGAATAAAAAAGCAGAGGTTATTTCCATTAAGGAAGAGACCAAAAAGGAGGAAAAGAAAGACAAGGGCAA AGAAGAAGGAAAGTCTTCCGAATCTACCAAAGATAAGGATAAAAGCAAGTCTGGTACTGAATCAACCAAGAAAAAAGATA ATGACAAATCTGCAGGTGAATCAACTAAAGAAAAAGGAATTGGCAAGTCTTCTGGTGAAACATTCAAAGTAATAGAAATT CATCAGAGGGAAACACAAGAGGAGATTAAGATAAAGGAGAATGTTCCTTATATAATTCACTATGTCTATGCACCACAACT TTTCAGTGATGAGAATCCGAATTCGTGTTGTGTTATGTAGTTGTAGTGGCAATTCAAATTTTCAGCGATGAGAGGGAGGA TGAATTGTGTTTATAAAATTATTTTCCAACTTTAAGAATTTGTTGTCGCTTGCATGAACTAATTGGATGAATGAACTCTT TTCTTGGGTCTTGAGAACTGAAGTACTAGTCTTGCATTTTTCTAGAGTGATTAATTGCTTGTATTGCAACAGCAGGATCA GATTGAAGATATAGTGGTTGATATATTCTTGGAATATAGAAAAATCTTGACTAACTTCTGGAGCATGAGGAGATTTGGTA ATGTCAAATGTCCAGAGCTTCTTGGATTAATCATGGATATAGAAATACATGGTTCTTCCATAGGAAGGCATCTTAGTGAA ATCAGAG
CDS sequence (LotjaGi3g1v0260700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGACGGGAAAGAAGAAAAGAAAGATGAGAAGGGAAAAGATAAAAAGGAAGGAAAGGAAGAAAAGAAAAAAGATGA AGGAAAAGAAGAAAAGAAGAAAGATGAAGGAAAGGAAGAAAAGAAGAAAGATGACAATGAAGTTATCACTGCTATTTACA AAGTTAACCTGCATTGTCAGGAATGTGGGAACAAGATCAAGAAGCATCTCATGACTACTCAAGGGGTACAGACTGTGGAT ATGGACATTGAGAAAGGAGAAATCAAGGCAAAAGGAAAAATAGACCCTCTAAAAATCTTGAAGCTTATAGAGAAGAAGAG CAACAAAAAAGTTGAACTAATATCGCCAAAAGTGAAGCCTAAGGAGGTTACTACTAAGGATGACAAAAAGCCAAAGGAAA CCAAAGATCCAATTATCCGCACTATCACGGTGAAGGTTGACATGCATTGTGACAAATGTGAGACTGACCTGAAAGGTAGA TTAATAAAGCACAAAGGTATTTTCAATGTGAAAACCGACAAGAAAGCTCAAAGTGTGACAGTTGAAGGCACCATTGAAGC AGAGAAATTGACATCATTTTTGAGAAAAAAAGTGAATAAAAAAGCAGAGGTTATTTCCATTAAGGAAGAGACCAAAAAGG AGGAAAAGAAAGACAAGGGCAAAGAAGAAGGAAAGTCTTCCGAATCTACCAAAGATAAGGATAAAAGCAAGTCTGGTACT GAATCAACCAAGAAAAAAGATAATGACAAATCTGCAGGTGAATCAACTAAAGAAAAAGGAATTGGCAAGTCTTCTGGTGA AACATTCAAAGTAATAGAAATTCATCAGAGGGAAACACAAGAGGAGATTAAGATAAAGGAGAATGTTCCTTATATAATTC ACTATGTCTATGCACCACAACTTTTCAGTGATGAGAATCCGAATTCGTGTTGTGTTATGTAG
Protein sequence (LotjaGi3g1v0260700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADGKEEKKDEKGKDKKEGKEEKKKDEGKEEKKKDEGKEEKKKDDNEVITAIYKVNLHCQECGNKIKKHLMTTQGVQTVD MDIEKGEIKAKGKIDPLKILKLIEKKSNKKVELISPKVKPKEVTTKDDKKPKETKDPIIRTITVKVDMHCDKCETDLKGR LIKHKGIFNVKTDKKAQSVTVEGTIEAEKLTSFLRKKVNKKAEVISIKEETKKEEKKDKGKEEGKSSESTKDKDKSKSGT ESTKKKDNDKSAGESTKEKGIGKSSGETFKVIEIHQRETQEEIKIKENVPYIIHYVYAPQLFSDENPNSCCVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| PANTHER | 39 | 313 | 275 | 3.3E-93 | – | |
| PANTHER | 39 | 313 | 275 | 3.3E-93 | – | |
| Gene3D | 45 | 111 | 67 | 2.0E-12 | – | |
| SUPERFAMILY | 50 | 106 | 57 | 1.57E-9 | ||
| Pfam | 54 | 108 | 55 | 3.3E-9 | ||
| CDD | 57 | 105 | 49 | 7.32316E-4 | ||
| Gene3D | 138 | 208 | 71 | 1.7E-11 | – | |
| SUPERFAMILY | 139 | 196 | 58 | 1.44E-9 | ||
| Pfam | 143 | 200 | 58 | 2.8E-10 | ||
| CDD | 143 | 188 | 46 | 0.00210199 | ||
| MobiDBLite | 211 | 270 | 60 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0260700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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