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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0293600 |
| Transcript ID | LotjaGi3g1v0293600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G42260.1 beta glucosidase 12; Swiss-Prot: sp|B8AVF0|BGL12_ORYSI Beta-glucosidase 12; TrEMBL-Plants: tr|U5KJR1|U5KJR1_LOTJA Beta-D-glucoside glucohydrolase; Found in the gene: LotjaGi3g1v0293600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:59948229..59954856) extracted from Lotus japonicus Gifu genome v1.2.
CTGCACTGCATCACTTTTTGGAACATAAAACTAGTCTGTGTTACTTCTTATTCTTCTTATCTTTGATATGGCATTCAACG CATTTTTACTTCTTGTCCTCTTCTTCAATCTTACTAGTACATTATCATCGGTTACATTTGCAACATCTGCTGCATCCACT CTTGATGATGCCTCAATGAGACGAAGCAATTTTCCCAAAGGCTTCATTTTTGGGACAGCATCTGCTTCATACCAGGTAAT TTATATGTGTGCATGCGCGAGCCCGTGGCTGTGTGAGAAATCAAGTTACTCCAAACTAACTCTTTGCAAGAGGGAGTCCC TCTGCTTAATAATTTTTTATATGAGATGAATTTAACAAATCGAACCACTAAATTACATCATATTATTATGATAATTATGT AAACGGAATTGCAGTTAAATAAGAAATTCATAAGTATATAATTTTACAGTCAATATTTACGTATATTTTAAAATACATTT CGTCCATGAAATTGAAATTATCTAATGAATATCCAACAATTACAGTTGATTGGCTTATTTGAAACTTTTTTTTTTTGGTT ATTTGAAACTTTAAATTCAGTGGTTAAGTTTATTAAATTCATATTTTATAACTCATATAATCCCTCTACATATTAAAAAA CAGAAATTTCTTGGAATTTACTCCATTTAATTTCTTTTAATAACTATAACATGTATAATAATTAATTTCACATATAGACT ATGTTTGTCATGTTCAGCTAATCAACTAGCTAAAGACTTGCTAAAAAGTTATTTGATTAAAAACTTAACCCGATTTTTTG AGAAACCAAATCTCAAGCGATACCAACTCTCCAATCTGCCACAATCTTTATTTAAAGACTCTCAAAGAATTTGAGCACAG GAATTAATTAGCTAGCTACGTCAAGTTACAATCTATAGTTTTAAAGACTCTCCATCCAAATTGAATTAGCTAGCTAGTTA TGACTTGACGTTTTCTATAGTTTTTAGTTAGTGCATTCAGATATAGTTTTTTTTAAAAGCCAAAATATCATTAATGAGAG AAAAGAGGGACAAAGCCCAATACAAAATCACCAACAGTTACAGAAAAAAGACAAAAAAAAACAAAGCAATAGAGAAACAA AGAAAGAAAAACATAACAATAAAGAACGAAAGAGAGAACACAAGGTAAAACAAAAACAGTTGGTGCAATATAAATAGATT TTATCTCAATTTGTTAAAAAAAATTATTATAATTTTTATTTTAAAGTACGTGCTAATATATATTTATTAAAAATTATCTA GGAGAATTGTCTACTGTACACCAACTAGTGGCGCACCGGTGCATTGTTACTAAAAAGTTGTGAATTGGTTGTGATGTAGT AAATTCAAAGCTAAATAACTGTGAATTCTTGTTTGCGTCTGCTGTGCATCTTCCGTTTTGGAATCTTGAGGCTAATTCTT TCTTGATATATGATTTTCTGTAACCTTGGAACATTTTGGCTTAATACGATTTTCCCATTCCAAAAAAAAAATCATAGCTA TTTGGTAACTAAACTAATAGTGTTGACAATTTTACGTACATCACATTTCCTATTTGCAAAATTTATCATGGTTCATTTAG ACAACCCCTTACAAATTTTATACTTACAAATTAATTACGAGCAATGTACCGGTACAATCTGAAAAGGAAGCACCCTCAAC CAACAAAAACATCAATTCACTAGTGCCCAGAGCACACACATGAATACTAACCAGCAATTACATACCTCTTTCCCTTTTGA AATTAATAATACCTGAGTTAAGAATTTGTTTATCATAATCTATTTGAAATATTTCCTTGAAAATTGGGAAACGTATGGGG CTTACACGGCATAATATGAGTTAAAAAATAGTATAAATTATCTTCTCTTAAATAAATATAAGGTGGTAATAGCAACTAGA ATATTTCTTTCATTTTTTAACCACTTGATTAAGATTTTCAAGGGTTCAAATCAAATTTCTTTAAATGATTGTGATGATAA TATACAGTATGAAGGTGCAGCAAAAGAAGGCGGTAGAGAACCAAGTATATGGGATACCTTCAGCCATAAATATCCAGGTA CGTATTTCTCAAATTTTCTCCCTCTAACTTGCAATCAAACAAAAGATGGGAAACTAAGGAGTAACAACGTGTTTGATTAC TGTTTTGTTAAATACCTTTTTAGTTTTTAAAAATATAAAATAAAAAAAACTCAGGACAATAATAAAAATGTATTCTTGAA ACTTTAAGATAATTATCCGAGTTTCGAGAAACTTATGGCTCAAATAATTGTTTTCCCTTATGAACAATAGATTTTATAAA TTGGTTGTGAATATAGTTTTTAAATTTAGAGGGAAATCAAAACAAGCTCTAATTTTTCTCTATAATCTAATAATAAATAT GAAACATGCAGAGAAAATAACGGATAGAAGCACCGGAGATGTCTCGATTGACCAGTATCACCGCTACAAGGTATGATCAA ATTTCCAAATGACAACAAGGAAATGAAATTAAGTGGCATAGGTTGTAAACTACTTAAAAACTAAAAAGAATATTTGATAT ACACATTTATTTTGCAAAGAAAAAGGTACATGTACACGTAGTTTTTTTTTCATTGTTGACCAATGAGATTGTAAAAATGT GTCACGTAATAACTTTTTAAATATTTTTCTATATTACTAAAATATGATTGGTTAACTTTATACTTTTTTAAGTTCAAAAA AAAAAAACTTTATACTTTTTTTAAGTATAGAAATCATTCTCTACTTTCTATTAATAAATTATTTTGTCACAATAGGAGGA TGTTGAACTCATGAAGTCTTTGAATTTGGATGCTTACAGATTTTCCATCTCTTGGTCCAGAATCCTCCCAAGTGAGTGAA ATTAATATGTAATTATTAACTCTTAATTCCTATTTATTAATTTTGCTTAGATGGATATTACACATTAACCGTTTTATATT TTTCTCTCAATGAATCTATTAATAGAAGGAAAGCTCAGTGGAGGTATCAACCAAGAAGGAATCAAATATTATAACAATCT CATCGACGAACTGCTAGCTAATGGTCAAAATTGAAATTCGATTGTATTTTATTATTTTTCTCTCAAACAATCGATAACAA ATTAAAATAATAAATTGAATTTTATCACTGCAGGTCTACAACCATTTGTAACACTTTTTCATTGGGATCTTCCCCAAACT CTGGAAGATGAGTATGGTGGTTTCTTAAGTCCTGAAATTGTGTAAGTGCTATAAAATTTATGTCGGTAATGATACATGTA TCAGAAATAATATATACACCTTAGAATATTATTTTTTCTATCACTTTTTCGATCGCATTATATCCTTAAATTTATGATGT ATCTATCTATTTTTTTCTTATCTCTCTTTAATGATCAACATTCACTAGTCACCGGATGTACACCGATCTTGGCTGAATTT ATTTTCCGCCCAAGTTAAGCCTTAGCCCCGTCCTTTTTGCAAATAAGTAAAAACAGAAAGAAAAATATCATAAGCACAAC TTTATTGTGGGATCATGTTAAAAATTAGTTTATTGGTGAATCATATTTTTACTACTAATATGTAGTACGTCTTATTTACA ATATGATCTTTATGTGCTAATATTAACTTACAAAAAGTTATTTTAACTTGTGAAGCAAATTTTTCTTGGTCAGAATATAC AAAGTCATAAAATAATTTTTTTTAATTATTTTGGTTTTTTTTTGGATAATTTAGTCTTTTATTAATAAAGAGTATAGTTC CTATTTCAAAAAAAAAAAAAGAGTATAGTTCCTTAATCATGAAATTTTAATATCAATTTAAAATGAAAATTTCATATGTG CACCTAAATTCAAGGTATGTATATGCATAAATTTATATTTTACATGTCAAAGTTCATGATCGATTTTTCAGAGAGGATTT TCAAGATTATGTGGAGCTATGTTTCAAGGAATTTGGAGATAGAGTGAAGCATTGGATTACTTTGAATGAACCATGGGGTT ACAGTAGCAATGGCTACGTACTTGGGGCATTTGCACCGGGTCGATGTTCTAAATGGGTTAATCCAAATTGCACCGGTGGT GATTTAGGGATAGAGCCATATTTGGTTTCACACCACCTACTTCTTGCTCATGCAAAAGCTGTTCAAGTGTACAAGAAGAA ATATCAGGTTCATTGTACTATTGTGAATTAATGACTAAATATACTTACTACTAGTGGTGTTAAGTTGGGGATGTATAGTT AATGTGATAATGATATGAATAAATTATGACCGTTGGATCTAATTATGAATGACCAAGATGAGCACATGAAGTCAAGCATG TGACATGACATTTTTAAGTTGTCACGTGAACATTCATAACTTTAATATTTGATCATTCATTTTTAAAATTCATGATTTAT TCTTATCATTCTCATGTAAAAAATTCATTCTCATAACATACATCGTAGGTATTGTTAACTAACTACCAAGTTTGAATTCT CTACACAGGCATCTCAAAAGGGTATTATAGGAATAACATTGGTGACTCATTGGTTCGAACCATTTTCAGATAACAAATAT GATCATGACGCTGCTGGACGAGCAGTTGACTTCATGTTTGGATGGTATTTGCTTGAAACGCTCTCAAATAATATAAATTA TTTGAAGTAAAAGGATGCTTCAATTCATTACAGTACCAACATAAGAACAAATGACAACATAGAACCTGTTGCACTACCTA GTGCACATCAAATTAAAACCACTCCCAACAATCCGTTAGAACTAGAAAACCCCTGAAAATTTAATTTAGCTCACTAAAAA CACATCTGAAGTCAAGTAATTTTCATGGGCAATAGTAGAATATTCTAAAAACTTAGCTCATCCATAAATCATTTTACTAC TACTATTTCCTATATATTATTGACAATAGGTTTGTTAATCATGTGCTAAAATTAATTTGTAAAAAAAGTCTTTTAACTTA TGAATCGCCTTATTTTTCATGATTCATCGAGTCAATTTTCATTTGTACACAATGATTGTAGGTTTATGGATCCATTGACA TTTGGAAACTATCCACAGAGTATGCGTTCACTAGTCGGAAGCAGATTACCAAAGTTTTCTAAGAAGCAAGCTAGTCTAGT TAAAGGTTCATTTGATTTTCTTGGACTAAACTATTACACCACTTATTATGCTGCCAACGCATCTTCTGGAAGCAATGATA GACCCTATTTCTTCACGGACTCTCTTGCTAATCTTACAAGTAAGCACATCTTTATCTATCAATTCTTTAAATTATTACTC CTTATATATAAGTTAATTTGATAATTAATAGAAAATCTTTTGTTTTTTATGGTAGCTGAGCGTAACGGGAATCCTATAGG TCAAAGGGTACGTATTGTGTAGCGCTATATGATCTCCATGTTAATTATCTAATAAATATTTTTTATCTTTAGAAACAATT TGTTGGCTAATGATCCGTAGACATATGGCTTTTTTTAACATCCAATGGATATACTTTTTAACGCGGTTTAAGCCACTAAG TAGCATCGGTTCATACCACTGCTAAGCACATGTCCATCGGATGTTCTAAAAAATATGTATGTCAATATAGCATTTTCAAA ATTTGTTTGACTATAGCAATAACTTATGTTTCTAATTATATTTGCAGGCCGCTTCAAGTTGGTTATATGTTTATCCAAAA GGAATTCAAGAATTGTTGCTCTATATCAAGAAAAAGTACAACAACCCTCTAATCTACATTACTGAAAATGGTAAATCCAT TAAACTTTACATTTGTAATCACAGAATATAACATTGAATGTTTACCTTGAATTTTTCTTAACATATATTAACAATTATCA TGTATGAAAGAATTTATACTTTGCAAATTGCACTTGAATTGTAGGTATTGATGAGTTCAATGATCCAACACTATCATTAG AGGAAGCTCTCATAGACACCTACAGAATTGACTATCATTATCGGCATCTATTTTATCTTCAATCTGCAATAAGGTGAGTT ATTTTTTACATGTATTTTCTTAATGTTGATTTTGTATATCTAATTTAATACTTTCGTTTTGGTGAATTTTTAAGGGATGG GGCAAACGTCAAAGGATATTTCGCATGGTCATTGCTGGACAATTATGAATGGAATTCAGGTTATACAGTGCGATTTGGAA TAAATTTTGTGGATTACAAAAATGGATTGAAGAGATACCAAAAGCTATCCGCAAAATGGTTCACGAATTTTCTCAAAAGA CATTAGACTTTGGATGACTAACGGTTCTATAAATTATGTAATAAAATACATCATTCAAGTTAAGCTTCCAGTGATTATAT GATCATTCTCCTTCATTCTCAAAGTCGAAGGAAATTGTATTCTTTTAATGATAGCTACTTTGCCATATATTTATGTGCAT TTCTTTGTATGTGCCTCTTCTAAAAAAATATGGATTAGGTTCCCGTAAAAAGAATGAAATTAATTTTTGTCCTTCACAAC ATGAGAAATAACATGGTCTATGGTGGCTTGGTTTTACAAAGTTGCATGAAAGGTGAATGCACCTAATTAAATCCTTCACT TTTTTTTCCTGTACTTTATGGCCAATTTCACCTTCACATTGTTTTTATAAAGCGAAAGATAAATTGAC
CDS sequence (LotjaGi3g1v0293600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTCAACGCATTTTTACTTCTTGTCCTCTTCTTCAATCTTACTAGTACATTATCATCGGTTACATTTGCAACATC TGCTGCATCCACTCTTGATGATGCCTCAATGAGACGAAGCAATTTTCCCAAAGGCTTCATTTTTGGGACAGCATCTGCTT CATACCAGTATGAAGGTGCAGCAAAAGAAGGCGGTAGAGAACCAAGTATATGGGATACCTTCAGCCATAAATATCCAGAG AAAATAACGGATAGAAGCACCGGAGATGTCTCGATTGACCAGTATCACCGCTACAAGGAGGATGTTGAACTCATGAAGTC TTTGAATTTGGATGCTTACAGATTTTCCATCTCTTGGTCCAGAATCCTCCCAAAAGGAAAGCTCAGTGGAGGTATCAACC AAGAAGGAATCAAATATTATAACAATCTCATCGACGAACTGCTAGCTAATGGTCTACAACCATTTGTAACACTTTTTCAT TGGGATCTTCCCCAAACTCTGGAAGATGAGTATGGTGGTTTCTTAAGTCCTGAAATTGTAGAGGATTTTCAAGATTATGT GGAGCTATGTTTCAAGGAATTTGGAGATAGAGTGAAGCATTGGATTACTTTGAATGAACCATGGGGTTACAGTAGCAATG GCTACGTACTTGGGGCATTTGCACCGGGTCGATGTTCTAAATGGGTTAATCCAAATTGCACCGGTGGTGATTTAGGGATA GAGCCATATTTGGTTTCACACCACCTACTTCTTGCTCATGCAAAAGCTGTTCAAGTGTACAAGAAGAAATATCAGGCATC TCAAAAGGGTATTATAGGAATAACATTGGTGACTCATTGGTTCGAACCATTTTCAGATAACAAATATGATCATGACGCTG CTGGACGAGCAGTTGACTTCATGTTTGGATGGTTTATGGATCCATTGACATTTGGAAACTATCCACAGAGTATGCGTTCA CTAGTCGGAAGCAGATTACCAAAGTTTTCTAAGAAGCAAGCTAGTCTAGTTAAAGGTTCATTTGATTTTCTTGGACTAAA CTATTACACCACTTATTATGCTGCCAACGCATCTTCTGGAAGCAATGATAGACCCTATTTCTTCACGGACTCTCTTGCTA ATCTTACAACTGAGCGTAACGGGAATCCTATAGGTCAAAGGGCCGCTTCAAGTTGGTTATATGTTTATCCAAAAGGAATT CAAGAATTGTTGCTCTATATCAAGAAAAAGTACAACAACCCTCTAATCTACATTACTGAAAATGGTATTGATGAGTTCAA TGATCCAACACTATCATTAGAGGAAGCTCTCATAGACACCTACAGAATTGACTATCATTATCGGCATCTATTTTATCTTC AATCTGCAATAAGGGATGGGGCAAACGTCAAAGGATATTTCGCATGGTCATTGCTGGACAATTATGAATGGAATTCAGGT TATACAGTGCGATTTGGAATAAATTTTGTGGATTACAAAAATGGATTGAAGAGATACCAAAAGCTATCCGCAAAATGGTT CACGAATTTTCTCAAAAGACATTAG
Protein sequence (LotjaGi3g1v0293600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFNAFLLLVLFFNLTSTLSSVTFATSAASTLDDASMRRSNFPKGFIFGTASASYQYEGAAKEGGREPSIWDTFSHKYPE KITDRSTGDVSIDQYHRYKEDVELMKSLNLDAYRFSISWSRILPKGKLSGGINQEGIKYYNNLIDELLANGLQPFVTLFH WDLPQTLEDEYGGFLSPEIVEDFQDYVELCFKEFGDRVKHWITLNEPWGYSSNGYVLGAFAPGRCSKWVNPNCTGGDLGI EPYLVSHHLLLAHAKAVQVYKKKYQASQKGIIGITLVTHWFEPFSDNKYDHDAAGRAVDFMFGWFMDPLTFGNYPQSMRS LVGSRLPKFSKKQASLVKGSFDFLGLNYYTTYYAANASSGSNDRPYFFTDSLANLTTERNGNPIGQRAASSWLYVYPKGI QELLLYIKKKYNNPLIYITENGIDEFNDPTLSLEEALIDTYRIDYHYRHLFYLQSAIRDGANVKGYFAWSLLDNYEWNSG YTVRFGINFVDYKNGLKRYQKLSAKWFTNFLKRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 13 | 9 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 11 | 513 | 503 | 2.2E-285 | ||
| PANTHER | 11 | 513 | 503 | 2.2E-285 | – | |
| Phobius | 14 | 25 | 12 | - | – | |
| Gene3D | 25 | 513 | 489 | 4.6E-231 | – | |
| Phobius | 26 | 514 | 489 | - | – | |
| SUPERFAMILY | 33 | 512 | 480 | 2.64E-193 | ||
| Pfam | 40 | 513 | 474 | 3.7E-161 | ||
| ProSitePatterns | 46 | 60 | 15 | - | ||
| PRINTS | 340 | 354 | 15 | 5.6E-23 | ||
| PRINTS | 416 | 424 | 9 | 5.6E-23 | ||
| PRINTS | 439 | 450 | 12 | 5.6E-23 | ||
| PRINTS | 460 | 477 | 18 | 5.6E-23 | ||
| PRINTS | 484 | 496 | 13 | 5.6E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0293600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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