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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0293900 |
| Transcript ID | LotjaGi3g1v0293900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine protein methyltransferase 1 like; TAIR: AT2G43320.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q2KIJ2|MET18_BOVIN Histidine protein methyltransferase 1 homolog; TrEMBL-Plants: tr|K7M999|K7M999_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0293900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:60109311..60114319) extracted from Lotus japonicus Gifu genome v1.2.
CTGTATTAAATACATGGGGTGCCAAACCCAATAGGTGGGGTGCCAAACTCAAATCCCTCAGTTTCTTGCGCTCTCACGGT GTTTCGTTTGTTTACACACATCACAACAAACATTTTCAATTCCAATTCGCCACTTTGAAAATCAAAACATTCATAATTCT CTTGCTCACCAAATCAAACTCTTCCTTCTTCTTCTTCCATTGACTTCTCTTCTTCTCTGTTCATGTCTCACTTTACTTCT AAACTCTTCATCTGATCGCTTAATTCTCCTTTTTCAATTCCCAATTTTCGATTTCAATCTCCTTCTTAATTCCACACCCG GTTAGTGTTTGTTTTCCCCTTATTTTATTTTTCTCAATTCATGCTTGAAATGGGTGAAAACAAAAAAGGACAAAATTACC TTTATTTTGTGCGTGTTTTATGATTTTGTTATGATTATGAGTTCTTCTGCAGTGTGTGCACATAGAGTAGGCGTAGCTAG AAGTAACACAGTGGAATTGGGTTATTGTGATTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATG TATGATTTTTTTTGATGTATTAATTCATTTTTAATTCTAATATATGATAGTTGCTTGCTTGTGTTATCAGTTATAGTGCA AGAGAAGGGACTGATTTCTAAATATCATTGTCAACTACAATGCCAATGCGTGCGCCGGCATTACTTGCGCAGTGCCTGCC TGGCCTAGTGCCTCATGATCGTGGAAGTCTCAGCATATCCGCGGTTCCTGCGAAGGATGTTCATTTCCCGTCACTAGCTG TGGAGATTCTTCCTTCAAAGGTGACACTTCCTGTTATATCATCATCGCCCATTCGGCCGAAAAGCATAAATTAATATATG TTTACCTTGAATTGAGGTGTTAGGGAGATCTTCTTTTGGGGTGATTGTGATTAGTCGGTGTAACGCGGATTTAAATGTGT TTGCTTTGCAGGCAGTTCACGCTGACAAGGACTCGGGGGAAAATGTAGACCAAGTTAAGGTATGTAATAATACTGTAGAT TAGTGTTGTTGTTGTTGTATCCCTGGCAGTAGATGGATGTTAATGTTAGGTTGGTTTCCGTTCATTCATTTTCTAAGAAG ACAATCATCTGCCATTGTAAAATAAGTATGTACCCTGCAGTTCAATGATTCAACTGCTTGCTTTTGTAAAACAAATGCAG ACAATCCAAATCTGTATCAATATGTTCACGATAAAACACTAAAACAAAGTCAGTAGGTAGGTCACATAGTGATGTTCTAG GATTTTTCGGTGGAAGGAACTTGTCTTATTCAGCATGGGGGAGCCTCTTGTATAGTCAAGGTCTCTCCTAATTACATTTA AGGTGATAGAGTGAATCATGTCGTTACATTGATGGGGGGAGCGGGGATCGAGAAATTACATTAAAAGGGGATAAGACCGG GCAATTACATTGTTGCGGATGGCGAGATATCTGGGAGGTCTAATAATGAGGGGGGTGGTGAATCTGGACGTCCTTCTCCG CCGGTAGGCGGCCAACACCATTAAGTACTTGATTGACTCGAAGAAATTTTGACGTAGCGCTAGCGATTTGGTTGGCTGGC CTACGTCCTAACGGTCCACAATACAGTGGGATGTAGGTATAATCTCTTGAAGTTAACCTATGAAAAACATGATTGCAAAA TATGCCTAATAAGATACTATTTTGGTTACTTTTCCATGGTTCCCTGCATGCTTTTGATGTATTTTAAATGGTAGGTTTAC AATATTTAACAGCAAGAGCTTGATATTTTTTTTCATTTTCTTGAAAACCTTCGCATATAAAATTCGTCTTAAATAAGCTT AACATAATGCTAGAGGTTACATTTGTATATCAGCTAGTTTGATTGTTGGACTGATTTTATCTTAAACCTCCTACAGTGTA TAGTTAGTGTTGCTGACATCATTGGATTCAGTGGTTCAGAGACAGTATCCTCAAAACCTGATGGTACGTACATGATATTT TAGTTTTTGTAGGCGTTGGACATGTGACTGTTTTCTTGTGAACCGGCATTTCCTTTCTAGTGCCTTGCTCTCTAAATTTA ACACAGTCAAGGAGATAATACTGCAGAGAATCTTAGTTTGTTATGATACTTAGAACAATAACTTTTTGGCATAAAAGGAA AAGGACAAATCTCATAGGTTAGTGTAATATGGTATAAAATATTTTCAAATAATGACATGATTCTTGCTGAGGATAATTTA TTTTACATGTTATATGCTTTGACATATATATGTAATTTATTTCAACATCAATAATGAAGGATTGGTCAAACTAATTTTTC TAACTTTGTAGGGTATCTGAAATCCTGGGCAAGTTCCATTGATCTTGTCAATGTACTAAAGCATGAGATACGTGATGGGC AACTGAGCTTTAGAGGGAAAAGAGTGCTTGAGGTATACTTTCCAGTTTCCACGAAGACTCTGTTGCTTCCTTTTATGCCT TGATTTGATTGAATTAATTTCACCTTGCGCCACACCTACAGCCTCTTTCCTTTATTTTTTAAATGCTCAGAGTTAGCTAT ATCTTCATGAGATTACTTTCTTTTCTTCTCTACTAATCCATATTTTTCAATCACGTTAGTGGTATGTGTTAATTGTAATA ACTTACATATAACTTTACTTCATGTTTCTTGCAGCTTAGTTGCAACTATGGACTTCCTGGAATCTTCGCATGCTTGAAGG TATGCAGTTTGGCTTGGGTTCTCACTCTCACTTTCTCTTTTCGCTGGTTCATTAGTCACTATTCTATGTGTATTTGATAG CTGGAAAAGAACATCTACATTTATTTTGATATATTCCTAACAAAGCAAATTTTATACTTGTTGGTTCATTCTAGTTTGAA TACTTGAGTCACAATGTTACTGGTGACCAACCTAAAGTTTCATGTTTTTCTTTTGGTTTGCAAACTAGCAAACAAGTTCA TGGCAAGAAGGGGAAATCTTGGTGTTTTGGGGAATCACTAACAATGCATATACTTTTAGCTTAGGCATCCAAAAAAACAC TTGCCCTTGGAATGATGAGTTTTGTTATCCATTCATTTAGTTATTTATTTCACAGGGAGCCTCCATGGTGCATTTTCAAG ATCAAAATGCAGAAACTCTAAGATGCACAACAATACCCAATGTACTTGCTAATCTTAAGCAAGCTCGTGATAGGCAGAGT CGACAGCCAGAATCTCCCCTTACTCCTTCAAGACAGACTCTAGCACCATCAGTTAACTTCTATGCTGGGGATTGGGAAGA ATTGCCTGCTGTGTTATCTGTTGTGAAAAACGATGAGTGTGAAGTGACACCTGGAATGAGTTTGAGCTTCTCTGAGGAAG ATTTTTTGGATGGATGCAGCAGCCAACTGAGCCAAGATGGGAGCACTTTAGGACAGGAGTCTAGTTCAAGAAGGTCTAGG TCTAGGTCTAGGAAACTCTCTGGAAGTCGAGCATGGGAAAGAGCTAGTGAGGCGGATAAGGGGGATGGTGGCTATGATGT TATTTTGATGACAGAGATCCCATACTCTGTTAACTCTATGAAGAAGCTGTATTCACTTATTAAAAAGGTTTGCTTCCTTT ACTTTATGGTCTATGCCCACTGAAAATCATGTTTTTTCTTATTTTGATGTTAAACTAAATATCATATCTGTAGCATATAT ATGTTGGACAAATGGTTGGTTGGTAGATGTAAGTTGAGTGTCTTCCATACTTCATTTGTTGATCCAATTTAGCTTTGGTG AAATTGCATTTTGTGTTGTGGGCTGTGGTGCTTCCACTTATTGCTGTGCTATTAGGCACAACAAATTGGTACAATTATAG TCGTATATTTATTTCCACTAAGGATTGAAATCTTCTTTCCGCAAACTATGTCTCGTTTTCTGTCCCATTAATAAAATTTT GACATGTCAAATAAAAACCACCATATAAGTTTGTAATTGTCCCTCTCATTTCTTTATTAATTGTCATGGCAAGATTTCAT TTGTGGGACATGAAATTGCGACACCATTTGGTGACAGAAGATCTTAGTCCTTTGCACAGATGCATGATCAAATTGATGCC TTTTGTAACAATGTGTTGCCCCTGATTGCTGAAGTTTCTGCTTTCCTATATCACCTGATTATTAGATTGAGTTTCAAATT TGAGTAACAGCCGAATTTTTAATTCCTTTTTTCTATTTTTCCTTTGATTACAGTGCTTGAGGCCTCCTTATGGGGTGGTA TATCTAGCTCCTAGTAAGAAACACTATGTTGGGTTTAACAATGGAGCACGACAACTGAGAAGTCTGGTAGATGAGGAGGG CATTTTTGGAGCGCATTTGGTCAAGGATTTAGCTGACAGAGATATCTGGAAGTTCTTCCACAAGTGAACAAGAGCTCAAA AACAAGATGGACTACTTTAGGAAACTCCAACCAAAAAGAATTCTAATGACACCATACATATTTCTATAATCTGAATCACA AGCATTCTTTTGTTTTTTGAATCTATAGGTTTCTCTCTAGTTTTCTTATAGTTTAGTAATAAAGGAGGTCTGAATTTGAT ATGTCAGTTGGCTTTTAATTCTTTCACAATTATTTCTTCGGAAAAGAATTCAAATATTGGAATTGTACATCAATAGTACA TTGAATTTTTATTTTTTTTTGGTTTATTGTAGGTGCATCATTTTTTCAGTTAACACTTGGTTGTTTTCATATCAAGTGCC TCTTTGGACTATAGCTACTATAGATATGAGAGATGTGCTATGTAAACATGCGTTCATCATACATGCGTTTACATCCTTGA AACGATCCTTGAAACGCAGGTTTTATTCATTTCATCATGCTTGCTTTGCCGTTTGACATCTAATTTCAGGATCGAGCATC AATTTTAGATAACACAACTTTGGTTTACACATCCCTTGGTAATCGATGGGATTATATAAAATAGGAAAAGAGCATACAAT CCATCTTCAATTTTTTCCCACCATGAATTTTTCTTTGGTTTCAATCAAT
CDS sequence (LotjaGi3g1v0293900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAATGCGTGCGCCGGCATTACTTGCGCAGTGCCTGCCTGGCCTAGTGCCTCATGATCGTGGAAGTCTCAGCATATC CGCGGTTCCTGCGAAGGATGTTCATTTCCCGTCACTAGCTGTGGAGATTCTTCCTTCAAAGGCAGTTCACGCTGACAAGG ACTCGGGGGAAAATGTAGACCAAGTTAAGTGTATAGTTAGTGTTGCTGACATCATTGGATTCAGTGGTTCAGAGACAGTA TCCTCAAAACCTGATGGGTATCTGAAATCCTGGGCAAGTTCCATTGATCTTGTCAATGTACTAAAGCATGAGATACGTGA TGGGCAACTGAGCTTTAGAGGGAAAAGAGTGCTTGAGCTTAGTTGCAACTATGGACTTCCTGGAATCTTCGCATGCTTGA AGGGAGCCTCCATGGTGCATTTTCAAGATCAAAATGCAGAAACTCTAAGATGCACAACAATACCCAATGTACTTGCTAAT CTTAAGCAAGCTCGTGATAGGCAGAGTCGACAGCCAGAATCTCCCCTTACTCCTTCAAGACAGACTCTAGCACCATCAGT TAACTTCTATGCTGGGGATTGGGAAGAATTGCCTGCTGTGTTATCTGTTGTGAAAAACGATGAGTGTGAAGTGACACCTG GAATGAGTTTGAGCTTCTCTGAGGAAGATTTTTTGGATGGATGCAGCAGCCAACTGAGCCAAGATGGGAGCACTTTAGGA CAGGAGTCTAGTTCAAGAAGGTCTAGGTCTAGGTCTAGGAAACTCTCTGGAAGTCGAGCATGGGAAAGAGCTAGTGAGGC GGATAAGGGGGATGGTGGCTATGATGTTATTTTGATGACAGAGATCCCATACTCTGTTAACTCTATGAAGAAGCTGTATT CACTTATTAAAAAGTGCTTGAGGCCTCCTTATGGGGTGGTATATCTAGCTCCTAGTAAGAAACACTATGTTGGGTTTAAC AATGGAGCACGACAACTGAGAAGTCTGGTAGATGAGGAGGGCATTTTTGGAGCGCATTTGGTCAAGGATTTAGCTGACAG AGATATCTGGAAGTTCTTCCACAAGTGA
Protein sequence (LotjaGi3g1v0293900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPMRAPALLAQCLPGLVPHDRGSLSISAVPAKDVHFPSLAVEILPSKAVHADKDSGENVDQVKCIVSVADIIGFSGSETV SSKPDGYLKSWASSIDLVNVLKHEIRDGQLSFRGKRVLELSCNYGLPGIFACLKGASMVHFQDQNAETLRCTTIPNVLAN LKQARDRQSRQPESPLTPSRQTLAPSVNFYAGDWEELPAVLSVVKNDECEVTPGMSLSFSEEDFLDGCSSQLSQDGSTLG QESSSRRSRSRSRKLSGSRAWERASEADKGDGGYDVILMTEIPYSVNSMKKLYSLIKKCLRPPYGVVYLAPSKKHYVGFN NGARQLRSLVDEEGIFGAHLVKDLADRDIWKFFHK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| PANTHER | 3 | 352 | 350 | 4.1E-145 | – | |
| PANTHER | 3 | 352 | 350 | 4.1E-145 | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| Phobius | 26 | 355 | 330 | - | – | |
| SUPERFAMILY | 110 | 303 | 194 | 2.22E-8 | ||
| MobiDBLite | 228 | 245 | 18 | - | – | |
| MobiDBLite | 228 | 259 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0293900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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