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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0303700 |
| Transcript ID | LotjaGi3g1v0303700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein-s-isoprenylcysteine O-methyltransferase; TAIR: AT5G59500.1 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase; Swiss-Prot: sp|Q558K8|ICMT_DICDI Protein-S-isoprenylcysteine O-methyltransferase; TrEMBL-Plants: tr|I1KVX6|I1KVX6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0303700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:63326043..63327245) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGCAGGAAAATTTCTTGCACACTCCAAAACTGGCCCTTTTTGTTTCTCTATCGTGAGCAACAAAGTCTCTCTTAG ACCTTTCAACAAACATTTTCATGCTGATGTGCCTACTCACGGTTATCAATTCCAGCCAAGACCTAAGCACGTTAGTCTTC AATTGAATTGCTCCTATGGAAAACCCTTTTCCCCATTACTGAAACCAACAAGAAAAAGGGCTGATTCGCTACCTTCTTCC AGATGCTCAAGCTCCAGTGAAGCCAGCACAGAATCTCATAATACAGTCCTAAACTACTTCAGAAATCTCTCATTTGATTC AGTAAAAGCTACTCTTCAGCAGTTAACTCCAATTGACATAGTGAAGTGGTCTGGGATATTATCTGTCATAACTGCAGCTA CAAAATGGACTGCGAATGTGCTCTTTAATCCTTTCTTCTGGATGTATTTTAGCTGGACTTGGTTGTTCTGGCCATGGTTG GTGGCCATAGTGCTTGCAGTTTATGGGTTATTTTGCTTTCGGAAACATCTGCGTGGCGAGGCAAACATATTTGAGCAATT GGCAATTGTTACATCAGTTTTTACATGGCTCACTCTTGTTCCACCGGGTCATGTCAATGGCTACCTTGAAGGATGGCCTT TTGTTTTCTTTTTCGTGTATCATTACTTCTTTTTCTTCAACGTTAGCGTTCGAAAGCGGTTATATGGAGACTATTATGCT CGGCCCCATGACCCAAAGTGGGATGTGAACTTGCCAATGTGGCCTCGCCTTTTGTTCAGTGCTGGAGTCATGGTTGGCCA CTGGCTTGTAGCATTTGAAGGACCAGAGCTACATCGCATACCGGGTGGGTGGAGCAATCTTGGAATCTGGGGTTTGATAA TTTCAACTCTCCTAATGCATTATAAGGCCACATTGTATCTTGCCAATTATTCAGAGAATGTGGTGGAGCCAACTTCTGTT GTGCAATTTGGACCGTATCGCTGGGTCCGTCATCCAATATATTCATCAACCATGCTTTTGTTTGTAACATACTGTATCGC ACTTCGAGCTCCTTTGAGTATGCTGTTCATTGTGGCGGTTTGTTTGTTGTATTATAAGCAGAAGGCAGATATAGAGGAGG CTTTGATGGTTGAGTCTTTTGGCAAGAGCTACACAGAATATGCCAACAAAGTTAAGTACAAGTTCATTCCTTTTATCTAT TAG
CDS sequence (LotjaGi3g1v0303700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCAGGAAAATTTCTTGCACACTCCAAAACTGGCCCTTTTTGTTTCTCTATCGTGAGCAACAAAGTCTCTCTTAG ACCTTTCAACAAACATTTTCATGCTGATGTGCCTACTCACGGTTATCAATTCCAGCCAAGACCTAAGCACGTTAGTCTTC AATTGAATTGCTCCTATGGAAAACCCTTTTCCCCATTACTGAAACCAACAAGAAAAAGGGCTGATTCGCTACCTTCTTCC AGATGCTCAAGCTCCAGTGAAGCCAGCACAGAATCTCATAATACAGTCCTAAACTACTTCAGAAATCTCTCATTTGATTC AGTAAAAGCTACTCTTCAGCAGTTAACTCCAATTGACATAGTGAAGTGGTCTGGGATATTATCTGTCATAACTGCAGCTA CAAAATGGACTGCGAATGTGCTCTTTAATCCTTTCTTCTGGATGTATTTTAGCTGGACTTGGTTGTTCTGGCCATGGTTG GTGGCCATAGTGCTTGCAGTTTATGGGTTATTTTGCTTTCGGAAACATCTGCGTGGCGAGGCAAACATATTTGAGCAATT GGCAATTGTTACATCAGTTTTTACATGGCTCACTCTTGTTCCACCGGGTCATGTCAATGGCTACCTTGAAGGATGGCCTT TTGTTTTCTTTTTCGTGTATCATTACTTCTTTTTCTTCAACGTTAGCGTTCGAAAGCGGTTATATGGAGACTATTATGCT CGGCCCCATGACCCAAAGTGGGATGTGAACTTGCCAATGTGGCCTCGCCTTTTGTTCAGTGCTGGAGTCATGGTTGGCCA CTGGCTTGTAGCATTTGAAGGACCAGAGCTACATCGCATACCGGGTGGGTGGAGCAATCTTGGAATCTGGGGTTTGATAA TTTCAACTCTCCTAATGCATTATAAGGCCACATTGTATCTTGCCAATTATTCAGAGAATGTGGTGGAGCCAACTTCTGTT GTGCAATTTGGACCGTATCGCTGGGTCCGTCATCCAATATATTCATCAACCATGCTTTTGTTTGTAACATACTGTATCGC ACTTCGAGCTCCTTTGAGTATGCTGTTCATTGTGGCGGTTTGTTTGTTGTATTATAAGCAGAAGGCAGATATAGAGGAGG CTTTGATGGTTGAGTCTTTTGGCAAGAGCTACACAGAATATGCCAACAAAGTTAAGTACAAGTTCATTCCTTTTATCTAT TAG
Protein sequence (LotjaGi3g1v0303700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAGKFLAHSKTGPFCFSIVSNKVSLRPFNKHFHADVPTHGYQFQPRPKHVSLQLNCSYGKPFSPLLKPTRKRADSLPSS RCSSSSEASTESHNTVLNYFRNLSFDSVKATLQQLTPIDIVKWSGILSVITAATKWTANVLFNPFFWMYFSWTWLFWPWL VAIVLAVYGLFCFRKHLRGEANIFEQLAIVTSVFTWLTLVPPGHVNGYLEGWPFVFFFVYHYFFFFNVSVRKRLYGDYYA RPHDPKWDVNLPMWPRLLFSAGVMVGHWLVAFEGPELHRIPGGWSNLGIWGLIISTLLMHYKATLYLANYSENVVEPTSV VQFGPYRWVRHPIYSSTMLLFVTYCIALRAPLSMLFIVAVCLLYYKQKADIEEALMVESFGKSYTEYANKVKYKFIPFIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 400 | 400 | 5.5E-188 | – | |
| Phobius | 1 | 145 | 145 | - | – | |
| PANTHER | 1 | 400 | 400 | 5.5E-188 | – | |
| MobiDBLite | 66 | 87 | 22 | - | – | |
| Phobius | 146 | 171 | 26 | - | – | |
| TMHMM | 150 | 172 | 23 | - | – | |
| Phobius | 172 | 182 | 11 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 183 | 200 | 18 | - | – | |
| Phobius | 201 | 211 | 11 | - | – | |
| Gene3D | 210 | 399 | 190 | 2.8E-23 | – | |
| TMHMM | 211 | 230 | 20 | - | – | |
| Phobius | 212 | 230 | 19 | - | – | |
| Phobius | 231 | 250 | 20 | - | – | |
| TMHMM | 250 | 272 | 23 | - | – | |
| Phobius | 251 | 271 | 21 | - | – | |
| Phobius | 272 | 282 | 11 | - | – | |
| Phobius | 283 | 301 | 19 | - | – | |
| TMHMM | 287 | 309 | 23 | - | – | |
| Phobius | 302 | 338 | 37 | - | – | |
| Pfam | 316 | 383 | 68 | 2.7E-8 | ||
| TMHMM | 338 | 360 | 23 | - | – | |
| Phobius | 339 | 365 | 27 | - | – | |
| Phobius | 366 | 400 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0303700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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