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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0310500 |
| Transcript ID | LotjaGi3g1v0310500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative; TAIR: AT2G16030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|A0PQX0|PHMT1_MYCUA Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 1; TrEMBL-Plants: tr|V7AG47|V7AG47_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0310500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:65793527..65797481) extracted from Lotus japonicus Gifu genome v1.2.
AGAGAAACATTAATTTGATCAGATTGAGAAAATGAACAAAAATCTGTAAACAAGATGAGTAGCAGATCGGGAAAGAATCA AACAACGTTGTCATCACCGACAACAACGAGGATGGACAAAGAGATTGACACGTTTCTCAAGAAGCTCTCATTTGGTGCCA TAGCCATTGCTTCCCTCACCCTCCTCTCCCTCTTCCTCCACACCCCCGACACCTGCATCCCCACCCACGCGCCACCGCAT CCCCACCTCCGTTTCCCCAAGTCCACCTGCGACTACCCTCCCACGCGCCCCCACCTCCCCCTCCACAAGAAGAATCACCG CCTCTGGTCCTCACGCGCCTGGAACACCACCGTGCATTCCTTCTCCCTCATCCTCCTCCCCCTCCGCCACCTCGGCCTCC TCCGCAACCACTCCAGGGCACTCTGCGTCTCCGCCGGAGCCGGCCACGAGGTCGCCGCGCTCTCCCTTCTCGGCGTTGAG GATGTCACCGGCGTTGAGCTTCTTGACTCCCCGCCACTCGTCAGCCGCGCCGACCCTCACAACCTCCCGTTTTTTGACGA AGCCTTCGACCTTGCCTTCACCGCGCGGTTTGATGAGGCCCTCTTCCCGGCGCGATTCGCTGCTGAGATGGAGCGCGTGG TGAGGCCCGGCGGCGCGTGTTACGTCCTCGTCGGGGAGTGTGGGATTAGTGAGGTGATGGAAGTTGTGCGTTTGTTTAGG AATTCGAAGCTTGTTAGCTCAGACAAAGTTACTTTAAGTGGAATGAGAATGACCAGTATTCTAATGAGAACTAGACAATC TACTTCCTGATGATTGATGTTTAGATTTTCAATTGTTGTTGATATTGTTCAATTTATGTATGTATGATTCTTATTTGATT TCATGTGGTTTTGGATGCATTTCTAGTTTTATATATGTATGTACAACTGGTGTTATGGTTTTTAGAGTGAATCAGGTATA AAGTGAACATTTTCATTGGCATTTTCTGGTTCTGTTCACATCTGAGTCTGATGTCTGTTTCGCTTGGAAATGTGGGAAAT GTTTTGCTCTTTAAGGGAAATGAATCTGAATGTATTAGGAGGATCTTTAAGGTAGTCTATAGCAAGATAACTTGTGTTCA TTTGTGTATTACTGATTTTCCAGTTGGATTGTAGTCTTGAGTACTTAAAGTAAACTTGCTTCTGATGTGTTTCTAGATGT GAAGGGGTTGTGGTTATCTAAACAGGACAAAGGTAAAGATTTGGAGTCACAGTCTTCAAAAACAGAACATCTGATTTATT CATACTACAACACATCAGATAATTTCCTTCCAATAGGTCTTACATGGTTTGCCAAAGTAAGAGATTTAGACCTACTGGGG AATAATTTCACAATTCTTTATGCGCATGTATCAAAGAATGTGGATTTTTAGGAGCTTTAAGCTGGATGGTTGCAGGCTTA TACACGAAATTGCAGAGATATCATGGAAATAAGAAACATTTTCTGCAAAAGGATGCGAATTACATTGATCTCAAAGGAGA ATGTCACTCTTCAAGAGAACTTATTTTGGATGATTGCTTGTATCTTCGAGAAAGTAGAGGGGTTCTGCCAAATTTGGATA ATTTCTCTGCAAAAAACTGCACATCCTTGACCTCCACGTGTATAGGCATGTTACTGAATCAGGTTCCTCTTCTGATCCCT ATTTTATTTTATTTCAATAATTATGTTGACATAATTGTACATAATTTCATGAGTGTTTGAAGTGAGTAGATTAATATGGT GTTTGGTCTGAAAATTAGTTGATGCTTGTCTTGAACCAGCTATTCCAAAAATAGTTAATAGTTGTGCTTGACAATACACA GGCTCACATACCTTGTGCTGAAGCTCTACTTTTTAATTAGAATCATGGGGCAACAAGGATCTAACTCTAGACCATGGTCT TAAATGCTTTGATACCATGTGATTAACCAAAATTTTAGGTGAAGACATATGAATAATTTTATATTTTATACATATAACAA TGCTATGAACGAGTATCGAGCAGATTAGTAATGTAATTTGATGGAGTGTTTTGCTATTACTTGCAGTAGTGTAACTAAGT ATATGAGCCTGTTAGTGGCTGTTATCACTGCCCCAGAAACTTTTATAGGTTTCTTGACATTTCTTATTTTCTGTTTCTAG ATTAAAGTCTTCACTTCTGTAAGCAGTAAAATAAGTTCCTATCAAGTCAGTATCAGTCCCTGTGAATGTCTCTAAACTTA TGACTGACAGGAAATAGTTGAGGATGGAAAGAAGATGTTTTCTTTGCCATGAGCCGATCTTCAAGATTGGTTTGTGCTCC GCGCTAGTGGAGAGTGAACATCTTTCTAGTTTCGCAACAAATTCTTTGCTTTTTCTCTGTCTTGTTGGACAGGTGGAGGT GCAACCTATCATGGTCAGGTTTAGCCCCGTCAATGGCAATGAATAGTCCCTTGGCAGTTCTAGAGTTTATGAATTCAGGA TAGCAATGGATCATATACTTGTGGCTGCTAAAATTTGAAGATAGTTCGTATATAGTGTTTTCAGATAATAAGTGGAATCA TGTGAAAGTTACATGTGTGGATCATAGTACCAACATCAAGGTCCTTATCAGACCAGTTGCCAAAAATGGTGGAATCCATG TATTGAAACAAACAAGTGGTATGAGGGATATCCATTTCACCAATCCTCTGTTGATAATGATAAATCTAAGTTTGGATCCA CATTAGGTGGAAGGGTCATGACACGTCAATGAGTGAAGGTGAAAATTACTTCTTGAAAAAACTCTCTTCTACTTCATTAC TACCTCACTCAAGTTGTTTTTTGTTTTTATTTATTTTCGTTCTTGTTTTGTATTTATCAAGATTGCAACAAATATGTTGT CTTTGCACATTCTGACATTGACCAAACCTCCACCTGCTGAAGCTGAAAAAGGCCTAGCCTTTCAACCAATATTTCCAGGT AAGAGTCCTCCAGAAGATGTGGAAGGCGAAACTTTACAGAGGTTTTCTGAAGATGAAGTTTATCAAACTACAATTCAAAG TGTGCACCCTGTTATTTAAAAATGTCATGAGGGTAATGATATCGAACTTGAAGTGGTTACCTCTGCTGAGATTGAATCCA AAGGGTCTTCTACCAACATTAAAGGTTCTGACTCAGATGGTCTCTTTGCCTCTAATTCTCCTATGAAGTGCTTTTCCTCA TTCCTAGGTCTTCAAACAAGTCCCTATCAGTCTGTCCGAGTCTGTTGTGGTCTTGGTACCATTTTATTGCGTGAAAAACG CGTCTAGGGCTTGTTAAGGCAGTCGGTAATTTCACTATATTGTTGATTGAACGAAAGCTCTTATGATGAGGATGATATGT TAATTTACTGAAATGGTCTCCATATATGACAATAGGGATAACACTTCCCAGATTGTGATCTACCACATTTGCAAGTGACA AACACTTTGACAACCTAGTTTATCAAAAAAGTCCCATGCTACACTTGACTTTCATGCATCATCCATAAGTCATGGGTGAA GCATTTCATAATGAATGAAAGCTCAGTGGAGCATGAGACTTTTTTTGGTATACTGATTGTTAAGATTTGTGCTACACTAA GTGCATTTGACACCATTCTGGAAAATGTTTTTTCTGTTGTCATACCAGTTGCCCACTTTGGTAAACTAACATATCATCCT CAATATAGGAAGTCACTTTCGTTAAACAAAAAATCGTCATATAAAAAAGATGAATATTGTAAGACTATATTTTTTTTTCG GTACATCGGAAAAATGTAAGACTATATTTTAGTAGTTAATTAGTATTTAATAATATTATTATATTGATAATAATTAGTTG AATGTTGACTTTTGTGTTATGTTGAATTGTTTGGTTGACCTTGACTTATAATTGACAAGAGTTATTTTGACTTTGAAATA ATAATGCATGGATGAATATATTTTGATAAATTAAA
CDS sequence (LotjaGi3g1v0310500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAGCAGATCGGGAAAGAATCAAACAACGTTGTCATCACCGACAACAACGAGGATGGACAAAGAGATTGACACGTT TCTCAAGAAGCTCTCATTTGGTGCCATAGCCATTGCTTCCCTCACCCTCCTCTCCCTCTTCCTCCACACCCCCGACACCT GCATCCCCACCCACGCGCCACCGCATCCCCACCTCCGTTTCCCCAAGTCCACCTGCGACTACCCTCCCACGCGCCCCCAC CTCCCCCTCCACAAGAAGAATCACCGCCTCTGGTCCTCACGCGCCTGGAACACCACCGTGCATTCCTTCTCCCTCATCCT CCTCCCCCTCCGCCACCTCGGCCTCCTCCGCAACCACTCCAGGGCACTCTGCGTCTCCGCCGGAGCCGGCCACGAGGTCG CCGCGCTCTCCCTTCTCGGCGTTGAGGATGTCACCGGCGTTGAGCTTCTTGACTCCCCGCCACTCGTCAGCCGCGCCGAC CCTCACAACCTCCCGTTTTTTGACGAAGCCTTCGACCTTGCCTTCACCGCGCGGTTTGATGAGGCCCTCTTCCCGGCGCG ATTCGCTGCTGAGATGGAGCGCGTGGTGAGGCCCGGCGGCGCGTGTTACGTCCTCGTCGGGGAGTGTGGGATTAGTGAGG TGATGGAAGTTGTGCGTTTGTTTAGGAATTCGAAGCTTGTTAGCTCAGACAAAGTTACTTTAAGTGGAATGAGAATGACC AGTATTCTAATGAGAACTAGACAATCTACTTCCTGA
Protein sequence (LotjaGi3g1v0310500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSRSGKNQTTLSSPTTTRMDKEIDTFLKKLSFGAIAIASLTLLSLFLHTPDTCIPTHAPPHPHLRFPKSTCDYPPTRPH LPLHKKNHRLWSSRAWNTTVHSFSLILLPLRHLGLLRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVSRAD PHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGACYVLVGECGISEVMEVVRLFRNSKLVSSDKVTLSGMRMT SILMRTRQSTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 20 | 248 | 229 | 6.4E-103 | – | |
| PANTHER | 20 | 248 | 229 | 6.4E-103 | – | |
| Phobius | 27 | 48 | 22 | - | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 49 | 251 | 203 | - | – | |
| Gene3D | 84 | 238 | 155 | 7.9E-7 | – | |
| SUPERFAMILY | 110 | 206 | 97 | 2.75E-10 | ||
| CDD | 121 | 200 | 80 | 7.78734E-4 | – | |
| Pfam | 156 | 204 | 49 | 3.4E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi3g1v0310500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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