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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0313000 |
| Transcript ID | LotjaGi3g1v0313000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Choline/ethanolamine kinase; TAIR: AT1G74320.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8L518|CK2_ARATH Probable choline kinase 2; TrEMBL-Plants: tr|I3SA86|I3SA86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0313000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66183710..66189967) extracted from Lotus japonicus Gifu genome v1.2.
CTAATTTTAGCCACATTTATCTGTGTGTGTGTCAGAAAAATCAGAAGCAAGCTTGAAAACTGTTCCCTCCCTCCATATCC ATTCCACGTTTAGCGTCTTCTCGTTGGCGGTGTAACTACCTCTTATATAAACAAAACCTTTTCTTCCATTCTTCTGAAAC CGCAGGATCTTTGCGCTCACCTCCTCTCTCGTTCCCGGCGGCGAGGTCACCGGCCACCGTGGCGCCGCCTCCACGCGCAT TTGGCTGTTCAGGTTCGTGTTCTTGGATTCGTTGTGCATCATATATAAGAATTTCATGCCTTTTTTGTGATTTAAAGGTT TTTTTTCTTTCTTTGATTGGATTTGTTCAATAGAATGGGCTTGATTACAATTATATATATTTTGTTCCAAAGAAATTGTT TGGATTCTACAACATATGTTGGAAACAAATGGTTTTGATTTTAGTTAATGTTTCCGTATCAATTTTTCATTTATTGTTGT TTTGTTTTATGTTGAAAATGAATGAGAGATCATTGTTAAAGAAATAATATAAAATCATTGATATGACATTTACCAACTTA AGCTTTTGGGATAATTGATTACTTGACATAGTATCAGAGCTCTACGACGAAGCAGTGTTCGGTCCCTACCGCCCCCAATT CTTCTAATAAAAAGTTGAATTGAAGCATAGGTGGGCCTCGCGGTGTATTAGAGAAATAATATAAAACATTATCCAACAAC TTAAGCTCTTGGGATAATTGGTTATGCTTATTGTTTGCCAATTTCAATGCTGAATAATCATCTGGTTTGTATCATTTTTA TGATTTGAATGGCTTGTATGCTTTGTCTTTTTTTGTTTGGGGTAATATCCCTGCTTTTATAGGATTGAATGTCTTATAAA CAATGAACTTGATATTTTTTCAGTGAATCTCTGCCTCTGCTGGGAGAATTGAGGAGTTTTTCAATGGGTGTAGCTGAAGA TCCTGTAAATAATAAAGATGCCACACAAAATCTTGTAGATAACAAACTTGGTGAAGCAGAAAATCCTGCCAATGTCAAAG AAATCGTTGCAGAAAATCCAATAGATGATAAAGGGAGGCCTGAAGAAAATCCTATAAAAGACATGGCAGATTGCCTTCCA GATGAAGCAACTCAGATATTGAAATCATTGGCCAGTGAATGGGAGAATGTACTAGATGCAAATGCATTGCAGGTGATTCC TCTCAAGGGGGCAATGACCAATGAGGTATTCCAGATTAAATGGCAAACAACAGCAGGGGAAACCTCGCGAAAGGTTCTAG CTAGAATCTATGGTGAGGGCACAGACATTTTCTTTGATAGGGATGATGAAATCCGAACATTTGAATTCATTTCAAAGAAT GGGCAGGGACCTCGTTTGCTAGGAAGGTTTGCACATGGCCGCATTGAAGAATTCATCCGAGCTCGGGTAATGTGATGTTC ACTTTTCATTGTTCATCTCTTTATAACTTTGTGACTTAAATTGTTGTCATTAGACCTGTTTAATGAAAGGGAAACGTGGA AGGAATGTAACATACAAATGATATTACTTAAAACGACCTTCACTTTTGCTTATTTAGGGTGTGCTTCGATACCCCTTGAG TGCAATGTGAACGGGATTTCTTCTCAATATGAGAAGAGTTTTGTTCCCTTTTTAAATTTTTCCTTGAAGTGTGTTAAAAT CCCTTTGCACCAGAGCTCAACAGATGTCCAAAAGTTTTCTTATCGTTCACATTCAAGTTATTTGGAACTTTGTGACTTAA ATTGTTGTCATTAGACCTGTTTAATGAAAGGGAAATGTGGAAGGAATGTAACATACAAATGATATTACTTAAAACGACCT TCACTTTTGCTTATTTAGAGTGTGCTTCTATACCCCTTGAGTGCAATGTGAACGAGATTTCTTCTCAATTTATGAGAAGA GTTTCGTTCACTTTTTAAATTTTTCCTTAAAGTGTGTGTTAACATCCCTTTGCATTGGAGCTCAACAGATGTCCAAAAGT TGCCTTGTCGTTCACATTCAAGATATTTGGACAATATAGTCTTAGCCTTTTATTAGACCTGTTCGATAAAAGGGACCTGT GACCACCGATATGACTTAAAACAACTGTCATTTTTTATTATTTATTCGCTCACCTTTGCAAGTTATTTGGTCAATGTAGT ATTTTCTTTTATTTATTTTACACTATATCCTATCGATGGACTTGATTAGCTCATAAACTATTTTGGATTTATCAGACCTT ATCAGCATCTGATCTGCGTGATCCGTCTATTTCTGCTCTTATAGCCACCAAAATGAAGGAGTTTCATGATCTCGACATGC CTGGCCCAAAGAAAGTGTTACTTTGGGAAAGATTGCGGTACGTGCTGTCTGATAGCCCATCCCAACCGCACCATTAAAAA ATACGAAGAAGTTGTGAGTAGAATTTGATCATTTCTCAAATAATTATTTTTCAATGTTGCAGAAACTGGCTTAGTGAGGC GAGGCGCTTGTGTTCTCCGGAAGAAGTTGAAACATTTCATTTGGACACAATGGACAAGGAAATCTCTAGTTTGGAAAATG AACTATCGGGCACTCACCAACGTATAGGGTTTTGCCACAACGATTTACAATATGGTAACTTTATGCTTGATGAAGAGAAC AATTCTGTGACCATAATAGTGAGTTTCTCTTCATGCTAGTGAAATTATAGTTTTGTTTCTGACATCTCTGTAGTGAAAAA AGCTAGTAGGCTACAATTTAATATTCTCATAGGACCTACTCTTTGAAGAGATAATTGGTTCTAATCCCCTTTTATTATCA TAGGCTTGCCAATTGATATTTTCTACAAGACATCAAAATGTTTTTATTGTAAATTGACTTTTCCCTTAGAACAAAAACTT CAATTGCACTATTGAATGTCTTACGGACCCAGTCTCCACTGTAATTCAGTTGTACACCCATCTATGAAATAATTATATTC TTCCAAAACAAGTAACATTAGAGAAATATTTCCTTCCACACTCACAAAAGAGAAATATACTTATATCACTGGCGGAACAG TACTTTGTATGTGGATGTAACTTGTAAGACTTCTGAGTTCTTCTATTTATAGGAGAGCATGCCATCTAAATTTTAGGAGT TTTAATTTTGGGAGATAAGGGAATCAATTTGATGACAAATGACTTTGATATAATCCAGAAGAGATTATGAATGATGTGTG GGTGGATAACAAAATCCTTTCCTGCAAGTGAGGACTTTTTTTTAATTAGCTATGGCTGAAAATATTATTTTTCTTCTTTA ATGACTACTCATAGCCTACCGGTTAATCTTTCTTTATTGAATTATCTTTAAACAACAACAATATTGTAAGAAATTGATAT GCCCTAACTGGCAATAACGATTTTAATGCTGTACTTTTGTAATAGGATTATGAATATTCAAGTTATAATCCTGTGGCATA TGATATTGCAAACCACTTCTCTGAGATGGTTGCGAATTATCATACGGAAACCCCACATGTTCTTGACTACAGTAAATATC CTGGTATGTGGCATGTAGAATCAAACCGCACTCTTTTCTTTTGTTATATTCAGCCAAAAATAATTTTTATCTGTTTCTCT TAACAGATTTGGAGGAGCGTAAAAGATTTGTGCATACATATTTGAGTTCTTCAGGTGACATTTCAGTTTTTAATGTTGAA GATCGAGTTCTTTACTGAATTATTTCAACAAGGGTTTGGTGTTTTCTTTCAATTTATAAATATTGATATTCTCTTTCATG AAGGGAGCAACAAAGTTGCATGGTCTAAATTAAACTAGTAGTTAGGTCAATGCATCCTTTAATTTCATCACACACATCTG TCACCTTACCTTAACCACTGTAAGTATGAAGTTTTAATCATGAAATTAATGGACATGTAACAGGTCAACAACCTAGTGAC AGTGAAGTGCAGCAGCTAGTTGATGAAGTCGAGAAGTATACACTTGCAAATCATCTATTATGGGGCGTGTGGGGAATAAT TTCGGTATCTTCACTTTGTTACTTTATCATTAGTTATTTTATCCTTATGCTTCTTATGTGTTTAGGATGGATGTGGCAAG AGTCCTTCAAAATGGATAAGTTATTCAATAAGCTGATGTATGAGCACCATTTCTATAAATAGAAACCGTATGTTAGTATG AAAAGAATCATTACCATGACTGAAAATCCTATTGTTTTATCTATTAAAATGGTAGATATATACTATGTAACCCGGATTTA GAAGATCCCCTCTTGAAGACCAAAAGCCAAGAGTCCTTTTTTCATCCACACCCATATTTTTCCACATTTTAAAAGCATTA CACCTGTCCTTTTCTGTGATTGTTGAGTCCTTGTGCACTAGTAAATAAATCATTGAGCAGTATTACCTTAACATTTGAAG TTTTTTGAGGAATTAAATTTGAAGATTGGGGAATTAAATTATTACACTCATAGTTCAGTGACCAAACTGTAGTTTGGTTA TTGAAACAAATAGTTTTACTTTTTAGGGACAGGTCTGTAAACTAAAAAGCCATAAGAGTCCTTCAACATTAGGAAATTTT CTTGATCCTAATGCATAATTCTACTAAATTTTTGCAGAGAAAAACATTTTTTTTCCAATAGTCGTAGTGTCTAATAGAAC TCTAGAGTCTAGAATTCCTACTTCCACTGTGGGGGTGAGAGTTAACATATATCTATAGCCTTATCTAAGTTATCTTCTGA ATATTTTTTCCAGGAGCATGTAAACAAAATTGACTTTGACTACAAGGAGTATGCAAAACAGAGGTTTCAAGAGTACTGGT CAAGGAAAAAACATCTTTTGAGCTCTGATGAGTCTTCCCATGATAATGTGACATACATTAATGGTACTTAACTGGATTGA AGTTATTTTCTATCATTGCACTATGAATAGATAGGTGATGATAAGGACAATAATTTACGATATTCATAAACTATGGCGTA CTATGTCAATGACGCAAGGCTGCAGTGTGTATGTCTAGACATAGCATATTGATATGTTTCTGGTAGCACATTGCCATGTT TATTGCTCATTATGTCTCCATGATGAATAGGAGCCTCAAGCCCATCTTTTTGTTTTGGCATTACTATACAAGGCCACCGA AAAAAAAAAAGGGATACAACTTAGCTAAATTGTTGTTGTATCAAATTATGCTTCTTTAGTATTGTTTCTGTGGTATGAAT TACAAAGGGCAAATTAATCAATTGTTTCATTTCATCTGTTAAGAATGAGATGTATATTCTTTTAGAAATGCAAGTACATT TAGGAGGTCACATGACTAATTAAAATAGTCACTTGGCTTCGTGTTTTAATCTTTGTCATTCTTAAAATGATTATGCATTT GGATTTAAAAATGTAACTACCTCAGCAGGGGACGTGGGTAAACTAGGGAATCGAATTGAACCGTGACCACATTCTTGTCT CATTATAATAGGTGTTATTGTATAGCTACAAGTTTGTTGCTCAAATGCATTCTATCTAATCATCTTGTAAAGAAGCACAT AAATTGAGCATAGGAGCTACCATACTATATGATCTCATGAATATTGAGTTGCCGTGTTGATTCAATTCACAAATATTGCT TCTCATCTTGTCTGACTATTGGTTTTCAGGAGAGCAAGCACCGATATCGATCCCCGGCGAAAAACCAGCAAATGTCTTCA GGAAGTTGAAGAAATTGTTTGGTCTAGGTTTATTCAGATCGAAACACTAGAGCAGGGTATTCCTCTACTTTCAACTTTAA GAGTGAAAATGGAAGATATGGGAAAATATAGATACAGAAATGCACTATGCTTGTATTGCAACTTTTCTCTATTCTTCATT TCGCCGCTGATGTTTCATAAACACCTCGGCTCCATCCAGAATCAGAAATGACATAAGGAAGAGAAGTGAGAAATCTGATG GATGATGTTATGCAAAATAATAGAGATTGGAAGAACGAAGTGGAAGTAGAATAAAATAAAGAGTGGGTTTTCTTCCTATG TACCAAAAAAACAGAAAATATGGGTATCAATATATTAAAGTTATAGTTTCACTAATTCTTTGTAAATTTAAATTTTGTCT CACTCTCATAAACTAATAATCATGATTTGGATGAACCTATAGAATACAATATTAATATCAAACAATAAATAAACTTATAT TATCTAGCTAAATACGGCGTACCAAACTAGCCTAAAAATTTGGTTTTGTAGGAGGCCGTAATTTGGTTTCTTGGGTTTTG ATTCTGATATGGGGCCTT
CDS sequence (LotjaGi3g1v0313000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTAGCTGAAGATCCTGTAAATAATAAAGATGCCACACAAAATCTTGTAGATAACAAACTTGGTGAAGCAGAAAA TCCTGCCAATGTCAAAGAAATCGTTGCAGAAAATCCAATAGATGATAAAGGGAGGCCTGAAGAAAATCCTATAAAAGACA TGGCAGATTGCCTTCCAGATGAAGCAACTCAGATATTGAAATCATTGGCCAGTGAATGGGAGAATGTACTAGATGCAAAT GCATTGCAGGTGATTCCTCTCAAGGGGGCAATGACCAATGAGGTATTCCAGATTAAATGGCAAACAACAGCAGGGGAAAC CTCGCGAAAGGTTCTAGCTAGAATCTATGGTGAGGGCACAGACATTTTCTTTGATAGGGATGATGAAATCCGAACATTTG AATTCATTTCAAAGAATGGGCAGGGACCTCGTTTGCTAGGAAGGTTTGCACATGGCCGCATTGAAGAATTCATCCGAGCT CGGACCTTATCAGCATCTGATCTGCGTGATCCGTCTATTTCTGCTCTTATAGCCACCAAAATGAAGGAGTTTCATGATCT CGACATGCCTGGCCCAAAGAAAGTGTTACTTTGGGAAAGATTGCGAAACTGGCTTAGTGAGGCGAGGCGCTTGTGTTCTC CGGAAGAAGTTGAAACATTTCATTTGGACACAATGGACAAGGAAATCTCTAGTTTGGAAAATGAACTATCGGGCACTCAC CAACGTATAGGGTTTTGCCACAACGATTTACAATATGGTAACTTTATGCTTGATGAAGAGAACAATTCTGTGACCATAAT AGATTATGAATATTCAAGTTATAATCCTGTGGCATATGATATTGCAAACCACTTCTCTGAGATGGTTGCGAATTATCATA CGGAAACCCCACATGTTCTTGACTACAGTAAATATCCTGATTTGGAGGAGCGTAAAAGATTTGTGCATACATATTTGAGT TCTTCAGGTCAACAACCTAGTGACAGTGAAGTGCAGCAGCTAGTTGATGAAGTCGAGAAGTATACACTTGCAAATCATCT ATTATGGGGCGTGTGGGGAATAATTTCGGAGCATGTAAACAAAATTGACTTTGACTACAAGGAGTATGCAAAACAGAGGT TTCAAGAGTACTGGTCAAGGAAAAAACATCTTTTGAGCTCTGATGAGTCTTCCCATGATAATGTGACATACATTAATGGA GAGCAAGCACCGATATCGATCCCCGGCGAAAAACCAGCAAATGTCTTCAGGAAGTTGAAGAAATTGTTTGGTCTAGGTTT ATTCAGATCGAAACACTAG
Protein sequence (LotjaGi3g1v0313000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVAEDPVNNKDATQNLVDNKLGEAENPANVKEIVAENPIDDKGRPEENPIKDMADCLPDEATQILKSLASEWENVLDAN ALQVIPLKGAMTNEVFQIKWQTTAGETSRKVLARIYGEGTDIFFDRDDEIRTFEFISKNGQGPRLLGRFAHGRIEEFIRA RTLSASDLRDPSISALIATKMKEFHDLDMPGPKKVLLWERLRNWLSEARRLCSPEEVETFHLDTMDKEISSLENELSGTH QRIGFCHNDLQYGNFMLDEENNSVTIIDYEYSSYNPVAYDIANHFSEMVANYHTETPHVLDYSKYPDLEERKRFVHTYLS SSGQQPSDSEVQQLVDEVEKYTLANHLLWGVWGIISEHVNKIDFDYKEYAKQRFQEYWSRKKHLLSSDESSHDNVTYING EQAPISIPGEKPANVFRKLKKLFGLGLFRSKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 36 | 50 | 15 | - | – | |
| SUPERFAMILY | 54 | 383 | 330 | 2.89E-96 | ||
| PANTHER | 54 | 392 | 339 | 4.3E-179 | – | |
| PANTHER | 54 | 392 | 339 | 4.3E-179 | – | |
| Gene3D | 67 | 157 | 91 | 4.9E-101 | – | |
| CDD | 82 | 380 | 299 | 6.68864E-128 | – | |
| Pfam | 108 | 309 | 202 | 2.8E-67 | – | |
| Gene3D | 117 | 381 | 265 | 4.9E-101 | – | |
| Coils | 222 | 242 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0313000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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