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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0314200 |
| Transcript ID | LotjaGi3g1v0314200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT1G63740.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q9CAK1|RLM1B_ARATH Disease resistance protein RML1B; TrEMBL-Plants: tr|G7JKN6|G7JKN6_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0314200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66458718..66467175) extracted from Lotus japonicus Gifu genome v1.2.
CAGATTTCTCTTATTGTGAGATTGAAGGTTGTAGAAACCAAGAAGGATCATCACTTGTTCCAATCCAATGGCATATTCTT CCGGAGCTTCTCAAATAACACATGCTGTATTTCTCTGTCTCTGCTTTATTTCCATATTCTGTTCGAAAATTGGTTTTAAT TTTTCAAGTTTGGCCAATTTGGGAGAAGGGAAAGAAATCTTTTTTATATGGCTAGTATAATTAAGTTGTACCTACTTAGA ATTGCCTCTAATTCTTCTATTCCTATTAATATCCATTTACCCAGAGACAATGTTGGACTTCTGGAAATGAGGCATTGGCG GAAGGAATTGTTGCTAGAGCATCTAACTTGGAAATGCGGCCCTTATGGGACTCTGGTATAAATAAGGTATGTGGAATGTA CTCAAGATTCAATTATCTTGTTGATGAAAGCAAAAGTAGCAGATGAAACCAAAGGAACATATATATATATATATATTATC AAATCCTGCTAACTTCATAGCTGGTGACTAACATTTGCTTTGTTAATTTATCTTCTATGCTTCACTTTCTCCTTCAATTT GTTTTAATGTTATTTTTTGCAATTCCTTCTCTTCAGCGAATTTCAAACCGCCCACTTAACTTGTTGCCTACTGCAGTAGG AGTTGAGAAGAAAGAAATTATCAATAAAATGGTCGCAAAGGTGATTACTGTTTCCCTTATAGGATCTGACTTTGATCTAA AGCTCATATAACTGCTGCCTCATCGCTGATGGCATTTCCGTTTTCATTCATTTTGGTTATACTAATCACATCCTAGTTTT TATATTGAATATAATAATACTTTTTGACAAATTGAAGGGTGTAGCAGCACAACTAAAGTCAAACAACACCCCTCAAATAA AGTATGATGTTTTTGTAAGCTTTAGAGGAGAGGACATCCATCATAGTTTTCTTAGTCATTTGACTAAGGCTTTTCCTCAA AAGCAAATAAATGCCTTCGTAGATGATAAACTTAAGAGAGGAGATGATATATCACCATCACTTCTTGAAGCAATTGAAGG ATCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTCTTCACATTGGTGTTTGGAAGAACTTGTGACAATACTTG ACTGCAAAGAGAAACATGGACAGATTGTAATACCTATTTTCTACAAGGTAGACCCATCAGATGTGCGAAATCAAAGGAAG ACTTATGAAACCGCACTCACTGAACACGAAAAGAAGTATAATTTGCCCAGGGTACAGATCTGGAGACAATCTTTAAATAA ATCTGCTAATTTATCAGGAATTAAGTCATTAGATTTTCGGTAAGTTTTCTCACCATAAATTTTCAATATTTCCTAGCTAT CTACTCGTTAGTTGTTACATAGGCATATTATCAAAAGCTAGTATCTACTTTCTAGTTTGGTTTTAAAACTTTAATGTACA CTTACTAGTTATTATATAATTACTTCTTCAAGTATTAGTTAATGCTGAAACTCATTCATTCAGACTACGATTAGATCAGA CTAGCCATGCTTTGTTGGTTTATTGAATTTAGTGGTTAAATCAGAGCTAAGAAAAACAGTTAAATACATTCAAATTTTCA AATCATAAGCCTTATACTCTCTATGGTAGTTCATCATATTAAAAGTCTGACATGAATATGGTTTTTAACACGGGTTGATA CCGTCTTCCATGACAACCTGATGTCATTAACTTATAGTAGCCACAAATGATTTATTATTGATGTTGAACTCCTCAATAAA AACTTTCAACCTTTTTTTTGTTTTTTGAAATGAACTTTCAACCTTACGAGAGTGATAGTAATGCTTTTAAATTCATACAT TTTTTTCTCTCTCTCTGTTTGTTGTTTAGGAATGATGCTGATCTGCTTGAAGAAATTATCAACCTTGTGTTGATGAGGTT GAGTAAGCATCCAGTTAACACAAAAGGACTTATTGGAATTGAAAAACCAATTACACAGTTGGTATCATTGTTATATCAAG AGTCGAAAGATGTGCGTGTTATTGGAATTTGGGGTATGGGCGGCATCGGCAAGACAACTATTGCAGAAGAAATATTTAAC AGAAAATGTTATGAGTATGAAGGTTCTTGTTTTTTAGAAAAGGTAAAGGAGGAATTACAAAAAGATGGAATGAAGTCTTT GAAAAAAAACTTTTTTCTACACTATTAGGAGAAGAGGTGAAAATTGACACTCCAAATGGGTTGTCCAATTCTATGAAAAG AAGGATTGGTCGTATGAAGATTCTTATTGTTCTTGACGATGTGAATGATACAGATCAAGTTGAAAATATATTTGGAACTC TTGATTGGCTTCGGCCAGGAAGTAGAATAATTATAACAACTAGAGATAAGCAAGTACTTATTTCTAACAAAGTTGATGAT ATATACCAGGTTGGGGCATTGAGTTCTAGTGAAGCACTTAAGCTTTTCAATTTGAATGCCTTTAACCAAAGTCATCTTGA AATGGAGTATTATGATCTATCACAAAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCGTC TTCTTTGTGGAAAAGATAAGGAAGTATGGGAAAGTCAGCTAGACAAGCTTACAAAAATGCCAATGAAAAAAGTTCATGAT TTAATGAAACTAAGCTATGATGATCTTGATTGCAAAGAGCAACAACTTCTTTTAGATATTGCATGTTTCTTCAATGGTTT GAAAATGAAAGTGAGCCACTTAAAAATGCTATTGAAAGGTCATGAAAGTGATAATTCTGTGGCTGTTGGGTTAGAAAGGC TAAACGATAGAGCTCTTATGACTATTTCTGAAGATAATATTGTGTCTATGCATGACATTATTCAAGAAATGGGTCGGCAG ATTGTTCGCCTAGAATCTGAGGACCCGGAATGCCGCAGTCGACTGTGCGATCCTGATGACATATATGAAGTATTGAAAAA TAACAAGGTAAGACTCCTAATTGAATATATGTCATCTTTAGTTCATATCTGACTGTATTTTATATGAGAAGTGTGGCTTT TGTTGGTGTTTAAATTTTGTTCTCTATTCATGGCAGGCAGGGGACTGAGGCTATTAGAAGCATAAAGACAGACTATTCTC TAATTGGGAATCTGAAGTTAAACCCTTACTTATTTGCTAAGACGAGCAAACTACAATTTCTGGACCTTGGAGGACAGGGT GGAGTGTGGCCAGATCTTTTTCCTGATGGGTTAAAATTGCTGCCAACTAATCTAAAATATCTTCGTTGGGTGCATTACCC TTTACCATCCTTGCCAGAAAATTTTTCTGCTGAAAATCTGGTTATATTGAAGTTACCATCTGGCCGTATGCAAAATCTTT GGCATGGAGTGAAGGTGAATATATGTGTCTTCTTCTGATTAAATTATTTTTTTAATTCAAGGAATAAGAAGTTGACGACT TATGCTTATGTTTGATTTCTTCATTTTGTAACAGAACTTGGTTAATTTAAAAGAAGTTGAACTCACTGCTTGCATTTGGC TTGAGGAATTGCCAGACTTCTCAAAAGCTATAAATCTCGAGGTTATAGATGTTAGTCTTTGTCTTAAGTTAAAGACTATC CATCCATCTATTTACTCTCGCAACAAGCTTCATAAACTCAAACTACTAGGGTGCATGTCCATTTTCGAATTTACAAGTGA TACCCGTTTAAGCTCCCTATATCATCTCGACCTTACAAGTTGCAAGAGTCTAAGGAAGTTGTCTGTGACATCAGAGAATA TAACAGAACTGCATTTGTCGGGTATTCCTGCCAATGCATTGCTTTCATCTTTTGCATGTCAAAGCAAGCTAGAAACCCTG AGTTTATTCGGCAGCCAATATGAGAGCTTACCTTCAAGCATCAAGAATCTTACAAGATTGCGAAGTCTAGAGTTAAGTAG AAGCTCTTTCCTTCTGTCAATTCCAGAGCTTCCGCTGTCCCTTGAAACCCTATCAGCCATCGCATGCAAATCACTGAAGA CAGTATTCTTCCCTTCAACGGCTGCTGAACAATTCAAGGAAAACAAGAAAATGGTTCAGTTCTTGAATTGCTTGAACTTG GATGAACGTTCACTCAGGGATATTGGGTTGAATGCACAAATAAACTTGATGAAACTTATACATCAACATTCTTCTATTCG AGAACACGATGATTACATTGAAAACTATAGACATGACATAGCTGAATATGACTTTCAATCAGTGTATGTGTATCCAGGAT GCAGTGTTCCAAAGTGGTTGGAGTATGAGTCAACAAAGGATGACATGATTATTGATCTCTCTCTAGATCAACTCTCTCCT TTAGGTTTCATTTTTTGCTTCATTCTTCCTAAGGACTCAAAAGACCATCTTACTTCAGTTAAATTTGAAATCACTATAAT TGATGGTGGGTGTGATGGTAAAAAGGGCAGTTTCAATATCAACTTGACAGAGGGCAGCTATTCAAAGGCTTCATTTATTT ATTCAGATCATGTGTGCCTGATATACAACAAAAAATGTTCCCGCTACGTATCTAGTGCAGCCAAAAATCAGACAAGGTTT AAAATCAAGGTTGCAGCATGGGCAGAAAAATATGGAGAGGGTCGAGAGCAGAAGTTAAGAGGGTTTGGAGTCAGCCCTGT TAACACGTTGAGGTATCATAATTTCATTCAGCAAATGGAATTGTTTGATTATTTTAGCAAATGGAAGCAAATTGTGGTTA GCACCATCCTCTGTGTTTCCTTCGTACGGTTGAAGATGAAGAATTTGATTTAATCTCAGAAGTCTATATTTCAATGTAAG TAGACATGGTTAACATTAAATTATGAACTTAAGTTCTCATAATTGCACTTTAAATATAGACATGTTAAGTATTTTAAGTC ATGTTTAACAGGGCTTTGGGTCCCCTCCCCCTTTATCTGCATTTCTTTGATATTTATGATGCTAAATTTTGAATCTGATG CTTATTTCAACTCTCTTCTTAGATTTGTGGAGTCTTTGGTGTTTGCGGAACAAGAGTTGCATCAAGTATCACTCCTTTGC GCGGTTAGCCATTATCCATGTCATATCAGGAATTGTTTTCACTCAACATCCTTTGTATTCAAGTTGGTTGCATGGGCAGC TGCTGACTCAGATTTCACAGACAGTAGCCACTGTTGGAAGCTAGGTACCTAACCCTGGCCTTGATTATTCAGAGGGGTCA CACTCAGAACTCATGGTGGAATCTAGATCTTGGCTCTTGGGTTTTGCAGGTTAACTTGATATATCAGAACCACGGTGATG ATTTTTAGACACCCAGTGTTAAGTTCATATGTTATCCACCTAACTTTTCTATTTATTTCTCAGCACAATCCATTACATTT TTCACTTTTCTCTCTTTTTTCCTATCTGTCTTCTTCTATTTAAACTGTATACACTTTATAGGCTTCTGGTGTCCACTAAT ATTTTTCCATACAAAAAATCCTCCAAATGGTGCTTGATAGAACACACTCTGATCAAGGAGTAATTTACAACAGAAGTTGT CACAGGGTTTTATAAACTCCAAACATAGAATTACACTATCCAAAAGCATAGCAATATGTTTCTTTCTTCTTTAAGCTGTC AGAAAACTTTATCACGAAAAGTATGATGATAGACAAGGACTACATATGTAACTTTCTGCACTAGTTGTCTATTGTTTTGT TTTCCTAGAATTTATCCCAATATCATTTTCCACATACTCGCATTTCTGATGAAACATTCACTAGTCTAATTTGGCATGAT ATTGCAGTCACTCTTTTCTTTTATTCTTTATATTTCTTCTCTCTTGCTGGCATGGGAGAAAATGGACTGTATCAGACAAT TTTTATGAATAGAAGTAAAATTCTCTTGGCAAATTTTTGATTGAGTTGTTAATCTTGTTACTCTTTTTTTAAGGTTGGCA GTTAGAGTGGACCATGGTGTAATGATGGGGCAGGAACTGTTTTGATGCATTTAAACTCATTGATTCAGAAGTTACATACC ACATTATCTGTTTAGGTGAAAAGGATTATTTTCCTGGTGATCAAAGGACAATGTGCATAGAACTCTACCAACTGGAGGCT GTGAATCCCTCTTCTGGTTGTTAGAGTCTATCCCTTCTAGAGGATCAACAGCAAAATAAATTTACAATATGGCTTTACTT GTTGAATTCTCACCGGTACAAGTGCTGAGTTGAAAATGGACAACTTTTTCTATTTGATGTCTTGCTTGCAGTCACATAAA TCCATTTTTTCGCTTTTTGTATCTTTCGAAAATGTGCATGTATTGGAGAATTGAGTATGAATGAATATCTTTGTATATTG TATTAGAAATAGCTGCAGATGGGTAGTATGTACTTTTGATAGGAATGCAGGGTTAGTTAGGAATTTTTAGTTGTTAGGAA GTTAGTTAGACAGGTATAAGGCATGTTGCCTATAAATAAGAGAGGTGAGTGAACATTAGGGGTATCTTTGTATTCAGTTA GGAATTGGGTTTAGAGAGAGAAGTGGTTCTCTTTCTAGGGTTAGAGAGGGTGTTTGGTATCTCTCTCATGTATCTTTCCC CTAATCCCCAATTGGGAATTAGGGTTCTATCAATAAACTACTGCTAATTTTCTGGTTTCTATCAACTTTCCACCTTTAAG ACGAGTCTTGGGTTTTATAAACTCTGCATACCATAGTTCAATGGGACTTAGAGTCAAGTGAAGTGGAAGAAGAAGCACGG GATTCTAATGTGATTTTAAAAAAACTTAAAGGACTAAAATGGATACGAAAAAGTCTACATAGTCACCTCAGCTGGTTAGG CTCGCTACGTGGACGGTTGGCTGGTCAAAATTAATTAGATGTAAGGACTTAATTTGATTAATTTTTTTCAGATAACATTT AGAAGATTTTTTGAAGGAACTCAATTTGATTCCTGGTACAAAGTCTAGAACTTCAAACGACAGTTTAAAAAATCTACTCG ACTTCCCTCCAACAAAAAACAGTGCAAAGCAAACACACCCATCCCTTGATAAAATAGACGAAACAAAGGGGAAATATGAA GCAGCACAACTCATACACTTGAATAGATAGTGTTGACATTCATAGTATTTCTTTAATACAAATAATCCAATGTCCTATGG GAAAGTGTTAACGTGTGAGTGAGTTGATACTTTTAGAATTTAGACACAGTCAAGTCAAATGAGAATTGCTTCTTCCGTCT ATTTAACTGCGCTGCAGGTAATTTAGGAGGATGATGATGCTATTGCTTGCTAGCTGCAACAAGAACATACATCATGAGCA AGACTTGAATTTTTTTTCTAATAGTCAGACAGACCAGGTTAAAATATATTCAATTTCAGGTAATTTTTTTTCATTTATAT TTGTTTACTTTCCTATTCTTTCCCCTAACCTTGTGTTTCCCTTATTGTGAAATTTAAGGTTGTAGAGACGAACAAAGATC ATCACTTGCTCCAATTCAATGGCATATTCTTCCGGAGCTTCTCAAATTATACATGCTGTATTTCTCTTTCTCTCTCTCTC TGCTTATGTCCAAATTCTGTTCAAAATTTGATTCTGAAATTTTTAGTTACTATATACGTTTATTCTATAAATGGCAAATA TACACACTGATTCTTTAAAATAAGAGATATTGGGAATTACTTATCTTCAATGTGTTGTAATGTCTTTTGGGAATCCTATA ATATTAGGTATCATGTGAGGATGTAAAGACTGAAAAATAAAATAGTGAGTTTCTTTTTGTCTAGCTCTTCACTGAAGATT CTATGTCCTGCACACCTTAGTTAACTTTTTCTGCAGAAAGCATTGTATATTTAGATATTAGGTGTATGATGACTTGGAGA TCAAGGTCCAGAATTGGACTTAGAAAATCCCCAGCCCCTCCTACATAATTTTTTGGGGTCTTTTTTTTTTTTTTTCCATC ATGCTTTCTGGTCTTGAAATTTGATTGCTTCTAGTTGCATGTCTTTTGTGTGAACAAATAGTTCTTGGTTTTGTTTGAGG ATTTGATATTTTTAAATTAATGTGTACTAAATTTAAATAATCTTACATTTTCCTGCAATATTTTATAAAACAGATAGTTC TAAAATTGAGCTTTGATTACTTGAAATTGCTTTTGGGCGTTATTTGGATCTGTAGAGGTGGATACAAAACCCAAAGCTTG CACGTTTGGTTAATCTGGTAGACAGGAATTAAATGTTTTTTTATATGACTCACTATGATTAAATTGCCCCAACTTAGAAT TGCCTCTAATTCTAGTTAACTTGCATTTACCTAGAGGAAAAACTGGCCTTCTGGATGTGAGACAATGCCTCAGGGAGTTG TTGCTAGAGCATCAAACTTGGAATTGCGACCCTTATGGGACTCTGGCATAAATAAGGTATGTGGAATGTGCTCTAGTTGT TCATTTATCCTATAGAAGATTCAGTTCAGACTCTCATAATGTTAGTCTTAAGTTTCAC
CDS sequence (LotjaGi3g1v0314200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAATCTTTGGCATGGAGTGAAGAACTTGGTTAATTTAAAAGAAGTTGAACTCACTGCTTGCATTTGGCTTGAGGA ATTGCCAGACTTCTCAAAAGCTATAAATCTCGAGGTTATAGATGTTAGTCTTTGTCTTAAGTTAAAGACTATCCATCCAT CTATTTACTCTCGCAACAAGCTTCATAAACTCAAACTACTAGGGTGCATGTCCATTTTCGAATTTACAAGTGATACCCGT TTAAGCTCCCTATATCATCTCGACCTTACAAGTTGCAAGAGTCTAAGGAAGTTGTCTGTGACATCAGAGAATATAACAGA ACTGCATTTGTCGGGTATTCCTGCCAATGCATTGCTTTCATCTTTTGCATGTCAAAGCAAGCTAGAAACCCTGAGTTTAT TCGGCAGCCAATATGAGAGCTTACCTTCAAGCATCAAGAATCTTACAAGATTGCGAAGTCTAGAGTTAAGTAGAAGCTCT TTCCTTCTGTCAATTCCAGAGCTTCCGCTGTCCCTTGAAACCCTATCAGCCATCGCATGCAAATCACTGAAGACAGTATT CTTCCCTTCAACGGCTGCTGAACAATTCAAGGAAAACAAGAAAATGGTTCAGTTCTTGAATTGCTTGAACTTGGATGAAC GTTCACTCAGGGATATTGGGTTGAATGCACAAATAAACTTGATGAAACTTATACATCAACATTCTTCTATTCGAGAACAC GATGATTACATTGAAAACTATAGACATGACATAGCTGAATATGACTTTCAATCAGTGTATGTGTATCCAGGATGCAGTGT TCCAAAGTGGTTGGAGTATGAGTCAACAAAGGATGACATGATTATTGATCTCTCTCTAGATCAACTCTCTCCTTTAGGTT TCATTTTTTGCTTCATTCTTCCTAAGGACTCAAAAGACCATCTTACTTCAGTTAAATTTGAAATCACTATAATTGATGGT GGGTGTGATGGTAAAAAGGGCAGTTTCAATATCAACTTGACAGAGGGCAGCTATTCAAAGGCTTCATTTATTTATTCAGA TCATGTGTGCCTGATATACAACAAAAAATGTTCCCGCTACGTATCTAGTGCAGCCAAAAATCAGACAAGGTTTAAAATCA AGGTTGCAGCATGGGCAGAAAAATATGGAGAGGGTCGAGAGCAGAAGTTAAGAGGGTTTGGAGTCAGCCCTGTTAACACG TTGAGGTATCATAATTTCATTCAGCAAATGGAATTGTTTGATTATTTTAGCAAATGGAAGCAAATTGTGGTTAGCACCAT CCTCTGTGTTTCCTTCGTACGGTTGAAGATGAAGAATTTGATTTAA
Protein sequence (LotjaGi3g1v0314200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQNLWHGVKNLVNLKEVELTACIWLEELPDFSKAINLEVIDVSLCLKLKTIHPSIYSRNKLHKLKLLGCMSIFEFTSDTR LSSLYHLDLTSCKSLRKLSVTSENITELHLSGIPANALLSSFACQSKLETLSLFGSQYESLPSSIKNLTRLRSLELSRSS FLLSIPELPLSLETLSAIACKSLKTVFFPSTAAEQFKENKKMVQFLNCLNLDERSLRDIGLNAQINLMKLIHQHSSIREH DDYIENYRHDIAEYDFQSVYVYPGCSVPKWLEYESTKDDMIIDLSLDQLSPLGFIFCFILPKDSKDHLTSVKFEITIIDG GCDGKKGSFNINLTEGSYSKASFIYSDHVCLIYNKKCSRYVSSAAKNQTRFKIKVAAWAEKYGEGREQKLRGFGVSPVNT LRYHNFIQQMELFDYFSKWKQIVVSTILCVSFVRLKMKNLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 242 | 242 | 1.2E-16 | ||
| PANTHER | 2 | 413 | 412 | 1.6E-73 | – | |
| PANTHER | 2 | 413 | 412 | 1.6E-73 | – | |
| SUPERFAMILY | 3 | 234 | 232 | 3.57E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0314200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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