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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0315300 |
| Transcript ID | LotjaGi3g1v0315300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein MIZU-KUSSEI 1; TAIR: AT5G06990.1 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617); Swiss-Prot: sp|O22227|MIZ1_ARATH Protein MIZU-KUSSEI 1; TrEMBL-Plants: tr|I1MIL7|I1MIL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66777384..66778913) extracted from Lotus japonicus Gifu genome v1.2.
CTTCGTACAAATTCACACCCTGTATAATAACTTCCTAGAAAACCCAACAACCCACACGTTCATTCATGACATGACCTTAA TTTGTTTCAAATCAAACTTGAACCACATTTTTCTTCTCTTCCTCATCACCTCATTCCCCTCCTGATCAACACCAATGGCA CCACCGTCACCATTGCCATTGCCACCACATCCACGGCCGGCATCCAAAGAACCCTCACCTGGCTCGACTCCTTCCAAGTC ACCACTACCTCTCCGCAGGCCGATCTCCCTTCAACCGGCAAACAGCAAGAGCAGCAAACACGGATCTAGCAAATTCTACC GGAAATTCCGGTCGGTGTTCCGGTCATTTCCCATCATCGTGCCGTCATGTAAAATGCCTACAGTCAGCCATAGCCGAAGC AGTGAGACATTCATACATGGCGGCACAAGGATAACCGGAACCCTGTTCGGTTACAGGAAAGCGAGGGTGAATCTTGCTTT CCAAGAAAGCTCAAATTGCCACCCCTTTCTGCTCTTGGAGCTGGCCATCCCCACGGGGAAGCTGCTCCAGGAGATGGGGA TGGGGCTGAACAGAATAGCCTTGGAATGCGAGAAGCCCCCCAACAACGAGAAGACAAGGATCATGGACGAGCCCATATGG TCGTTGTTTTGCAATGGGAAGAAAACAGGCTACGGGGTGAAGAGGGAGCCGACGGACGAGGACTTGAACGTGATGCAGTT GCTGCACTCGGTGACCGTGGCGGTTGGCGTGCTTCCAAACGAGATGTCAGACCCACACGATGGCGAGTTATCGTACATGA GGGCGGATTTTGAACGTGTCATTGGGTCCAAGGACTCGGAGACTTATTACATGATGATGCCTGATGGGAATTCCAACGGG CCTGAGCTAAGCGTGTTCTTCGTTAGGGTTTGAATTGATTGAAACAAGTGAGAAAAAGGGGCAAGAATTAATGTTTAATC ATCTTTTTGCACCACGATATATGAATGTTTGCATGCATGTTCTTAATTAGAACAGTATATATTCATATATATGATGGGCA AGATGAAAAAATATCTTGTCTTTTCTTGTATAGTTCTTCGTTTTCTCTAATAAAAGTATACCGCTTATGTTCTAAAAACT AACATTTCTCTAATTAATTATTTGGAACTTTTCTATTGAAGTGCTATATATACTTTTCTTAGAGTGAAAAAAAGGAGAGA AGGCAACATGTGATTGCAGGATAGACGTATATTACTAGTTAAGCTAAGTAAGAAATAGTGAAATGAAGTTTGTTTCATGG AGATTGGAGAGGGTGATCAGGGGACGGATGATGATGATGTAGATTAATTTCTTTGTATCCATGTAAGTCTATTTATTGTG AAATTTGTTCCCTATTGGAAAATGTTTGATTCACATCATTTGAAGAGTTCACCTTCACTATTAAAAAAGGACAATTTTGG CTCGGATATAACACCATAACTAATACTTGCGAATTTTCCTGCGCTTTTTTACTGTAAACGTAAATAGAGAGTAAAAGGGT TGCTGTCATG
CDS sequence (LotjaGi3g1v0315300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCACCGTCACCATTGCCATTGCCACCACATCCACGGCCGGCATCCAAAGAACCCTCACCTGGCTCGACTCCTTC CAAGTCACCACTACCTCTCCGCAGGCCGATCTCCCTTCAACCGGCAAACAGCAAGAGCAGCAAACACGGATCTAGCAAAT TCTACCGGAAATTCCGGTCGGTGTTCCGGTCATTTCCCATCATCGTGCCGTCATGTAAAATGCCTACAGTCAGCCATAGC CGAAGCAGTGAGACATTCATACATGGCGGCACAAGGATAACCGGAACCCTGTTCGGTTACAGGAAAGCGAGGGTGAATCT TGCTTTCCAAGAAAGCTCAAATTGCCACCCCTTTCTGCTCTTGGAGCTGGCCATCCCCACGGGGAAGCTGCTCCAGGAGA TGGGGATGGGGCTGAACAGAATAGCCTTGGAATGCGAGAAGCCCCCCAACAACGAGAAGACAAGGATCATGGACGAGCCC ATATGGTCGTTGTTTTGCAATGGGAAGAAAACAGGCTACGGGGTGAAGAGGGAGCCGACGGACGAGGACTTGAACGTGAT GCAGTTGCTGCACTCGGTGACCGTGGCGGTTGGCGTGCTTCCAAACGAGATGTCAGACCCACACGATGGCGAGTTATCGT ACATGAGGGCGGATTTTGAACGTGTCATTGGGTCCAAGGACTCGGAGACTTATTACATGATGATGCCTGATGGGAATTCC AACGGGCCTGAGCTAAGCGTGTTCTTCGTTAGGGTTTGA
Protein sequence (LotjaGi3g1v0315300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPPSPLPLPPHPRPASKEPSPGSTPSKSPLPLRRPISLQPANSKSSKHGSSKFYRKFRSVFRSFPIIVPSCKMPTVSHS RSSETFIHGGTRITGTLFGYRKARVNLAFQESSNCHPFLLLELAIPTGKLLQEMGMGLNRIALECEKPPNNEKTRIMDEP IWSLFCNGKKTGYGVKREPTDEDLNVMQLLHSVTVAVGVLPNEMSDPHDGELSYMRADFERVIGSKDSETYYMMMPDGNS NGPELSVFFVRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| MobiDBLite | 1 | 51 | 51 | - | – | |
| PANTHER | 20 | 252 | 233 | 2.0E-110 | – | |
| PANTHER | 20 | 252 | 233 | 2.0E-110 | ||
| Pfam | 93 | 251 | 159 | 1.7E-64 | ||
| TIGRFAM | 93 | 252 | 160 | 8.0E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Hydrotropism | Growth or movement in a sessile organism toward or away from water, as of the roots of a plant. |
Expression pattern of LotjaGi3g1v0315300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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