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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0315600 |
| Transcript ID | LotjaGi3g1v0315600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPI mannosyltransferase 1; TAIR: AT5G22130.1 mannosyltransferase family protein; Swiss-Prot: sp|Q500W7|PIGM_ARATH GPI mannosyltransferase 1; TrEMBL-Plants: tr|I1KTS4|I1KTS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66854636..66858877) extracted from Lotus japonicus Gifu genome v1.2.
ACTAGGTCTAGATTACTTAGATCTAGATTCCAACCTCTTAAATTTGTAACAAAAAAGTTCAATCAAACACACTATTTTTT TATCATTTCACAATAGACCCATGTTATTATTCTATTCTCAATGAACATGTCATTTGAACTTGTTTTTTTTTTTTCTCAAT AGATGCTATGTCGTCTACCTTTCTTCTTTTAGAAGCCCTAAGTAGTTGAAACACTGTAACAAGCTGTGCCTGTATCGAAC CGAACGTTGTCGTTGCTGGAGCCGAATGCTGCCTTCGCCAGAACCAGATCTTCATCATCGACGCGGTTCCTACCGTTGCC TGGGATAGGTAGCGAAATTGCAATAAGCACTTGCTATATTCCATTGGTTTCATCGAATAAATGTTTCGGAGCGTTTTTTT ATTGCCAATCTGATATTTGGGGCTTCTTAATGTTTTAGCAGATTTTGTGGCTAGTGTAACAGTGGTTTGATTATGATATT TTTTTTGCACATCATATGTTTGACGAAATGTCAAGTCAACTATATGGAACATGTTTTTTCTTGGTATAATGTAAATTCAT TCCAGCACTGAGTTTGAGCTTCAGAAGATGATGTTTCATTTCTTGTTCCATTACTTTGTTGTCTCTAAATACTAAAATAA CAATAGATTAAGCTTGACCAATGACCATGCTTTCTTTTACGATTTGTTCAGCCAAAAGCTTCAAATAAATTGAAGATATG TTGATTTGGGATTTTGTTTATCAATCTACATTTTGCACTTTGCACAATGTGTCCTCATCAGTAAAGGTAGACTGAGATTC TCATTTCTATGGGAAAAAAGTTTTAATTTTAATAGAAAGATGAAAAATTTATGTTAACGAGAAAAATATTCTGTATATAT TCTGAAAAGGCCAAAATCTTAAATATGGTTTTTGGACGTATTTATGATTCTGAAGCTGAATTGTTTTTTTCTGATGTTTG TATTGTTGTTACCTTGCAGCAATGACATTGTTAGATATCCGTTCACTGCTTCTATTCTCAGCTGTTTTTCGTGTTATACT AATTGTATATGGAGAGTGGCAAGATGCCCATATGGAGGTTAGATACACTGATGTTGACTACCTTGTCTTTTCTGATGCTG CATCTCTAATGGCTTCGGGCGATTCCCCTTATAAGAGAACCACATATCGCTATTCCCCCTTGCTTGCGTTTCTTCTCATT CCAAATTCATTTGTCCATAGCGCCTGGGGAAAGTTTCTCTTTTCATCTTCAGGTATGGACAAGTTTTCTGATGTAGTTTC TGCAAACAGTAGTGTTGATTTTCCATGTTGAAGCAATTTAGATCACTTGTTTTAGGAGAGCCTTTTAGTCTATGGCTGCA AGTTCTAATTTCATTATCAAATGTTAGTTTGGGAGCATCTGTATAATGATAGATTGGTGGATTATGTAGAAGTGATGATG CAGATTTTGTAAATATACTATTTGGCTCCTCTAAGACGCATGAAGCATTTTAGAGACAAAAAAATGTGGATTTGTTGAAA TGATTAGAAAACTAATGAAGTGAATTTTAACAATTTCATGATTTGTTTTATATATGAAATGAGTTTGAGTTAATGTGTTT TTGGATAATGATTATGTTGAATGGTTTTCCAATCATTATGTCTAAGCACATGTTTATCATATCTTAAATGCAGATATACT TGTCGGATATTTCATCTACAATATTCTAAAGCTGCGGAAGGTTCCTGAAAACATCTGCAACTACTCTGTCATGACATGGC TCTTTAATCCATTTACCTTCACCATTGGGACACGTGGGAACTGTGAACCCATTGTTTCTGCCATGATATTGTGGATCATT ATCTGTCTTATGAAAGGTAATAGTAATTTACAGATTGTAGTATTTTAGTATGTAATCCTTTCTATGTCTTTTACAGTGTA CTGGTACATTTGGCTTTTTTGCAAGACGTAGTTTAACATACCAGGATAAAGGCACTATTAAGGAATAATCTTGTATTCTG TATTGCAGCATATTTTAATACTTTTTACCAAGCACTCATCACTGAGAATTGAAATGTTTTCATTTCGATCCCTGGTAAAC TAGTTTATCTTTCCTGCCAAGCATTCTAAAAGCTTAAAAACTAGTATAACATAAGACTACTAGGTACCCTTTATTTTATG AAGGTACCGGTACCTTTAACCATTAGTCGCCAATTTTCAGCCTTGTGTCTTATTAATTGAAATTATACAAAAAATTGCTG CATTTATACATCAAGTTTGTTGGACAAATGGACAAATAGTAATCATTAATTGTTGAGAGTTGTCAGTACCCTACAAAAAG AAGTTACTGGAGAAACCTTCTAGTTAACGACTTAAGTATTTTGTTTGAATCGGGGGTTAAAGTAGAATGCCTTTTACCTG GCTTTCGATTTTCCTTTCTAATTTTGCTATCAATTTGAGAAGTTTGAGTCTTACATGTGATTGTTAGGCTTGCTGACGGT ATTTTTTTTTCTTTTATTTTTGTTTTATTCCCTCGTTTGCAGGTCGTGTGTTACAGTCAGCATTTTGGTATGGAGTTGTT GTCCATTTCAGGATTTATCCTATAATTTATGCTATTCCTATAATCCTGGTTCTTGATCCGAACTTCTTCCCATCTGGTCA GAAACCTGTCCTACGGAGCTGGAGTGCTGTTCAGGGAGAGAGACCGAATGATGGGGATGGCTGGTGTGCTTCACATAATT TATTAAAAAACTTGTTCACAAGGGACAGGCTGATATTTGGACTGGTCTCAGGATTGGTTTTCTTCTTCTGCACTGGTCTG TTATTCTGTTTATATGGGTGGGAGTTTCTACATGAAGCACTGCTGTACCATCTTACTCGTACAGATCCAAGGCACAACTT TTCCATCTATTTCTATCACATATATCTCCAGTACGGGCATGATATTTCAGTGTTGGAAAAGCTTATCTCCTTTTTGCCGC AGTTTGTGGTTCAGCTTGTTCTCATTTTCCGCTTTGCACAGGATTTACCATTTTGCCTATTTGTGCAGACTGTGGCATTC GTGGTGTTCAATAAGGTTTGTTATGAAAAACAGAAAAATAGAGGCTGCAATTTTCAATAGTGCTACATATTTTCATTTAG TAAAAATTCTTACATAGATTTCAGTGACTTATATTGCTTATTTCAAATTCAAACATCATTGTCTATATTGGAGCCCTTTT GGTAATCATCCTTTAAATCAACACGCTTCCTTATATTTTAGCATAAACATTGCAGACTATCATTTGATTTTGTTGTCATG CAGGTGATTACAGCACAATATTTCGTTTGGTTCTTTTGCTTGCTGCCTCTAATACTCCCATGGAGTAAAATGAAGCTTAA ATGGGATGGATTGTCTTGTATTCTTTTGTGGGTTGGAGCTCAGTCCCATTGGTTAATGTGGGGCTACCTGCTTGAGTTCA AGGGTAAAAATGTCTTCTTACAGCTTTGGATGGCTGGTTTAGTGTTTCTAGCAGCCAACATATTCATCCTTGTCATGATT ATCCGCCAACATAGATGTACTTCAGTTTTTAGATCTTTAGAGCATGTCCAGTCCAAGAATGTTGAAAAGCTTGAGTGAGT CACCCTGACCCATGCTTGAACAGTGTATGATTTTCAATTTTCATTCTTTTTGTTATTTCCCTAGATGTGCTTCAGTTTTG GAAGGTTAACAAATCAAGTTCATGGCTACAGTTAATTTTGAAAACTGATAATCATGTTGAAATTTGTGTTTTCCCCCCTC TAAAGGTGAACAAATAGGTGAGTCAATGTCTTCCCTTTTTCCCCAGTACATATACATATACATAATCTAAAAGAAATGAA GTCAGTTTTATTGCTTCCTCAGCTCTTTGTTCTTTATCTGCACTTGAAGGGTCTGTTTAGGGAACACTGTCCTAATTATT TTTCTGTACTACATTACGTCAACCAAGCTCATCCCAAGTCCCAACATTATGCATTACGTCACCCAAAAAAAATAAAAGAA CAGAAAAGTTATTTCCAGAGTTTCTCAAAAATGAATAAGATTTATTCACTTGTTCAATTTGTAATGTGTTATGATGCGAA CGCATTAAGATTTAAGAAGAAAAAATGTGTTTACAAGGAAATATATAAGGAGATTTAATCTAGAGATGCTCTTATTATTT TTTTGGTGGTCAACGCGATCTTTCATTTTAAAACAATGGCAGCTTCTCTAAAAGAGATGCACATTACACTATTAAACCAA GG
CDS sequence (LotjaGi3g1v0315600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATTGTTAGATATCCGTTCACTGCTTCTATTCTCAGCTGTTTTTCGTGTTATACTAATTGTATATGGAGAGTGGCA AGATGCCCATATGGAGGTTAGATACACTGATGTTGACTACCTTGTCTTTTCTGATGCTGCATCTCTAATGGCTTCGGGCG ATTCCCCTTATAAGAGAACCACATATCGCTATTCCCCCTTGCTTGCGTTTCTTCTCATTCCAAATTCATTTGTCCATAGC GCCTGGGGAAAGTTTCTCTTTTCATCTTCAGATATACTTGTCGGATATTTCATCTACAATATTCTAAAGCTGCGGAAGGT TCCTGAAAACATCTGCAACTACTCTGTCATGACATGGCTCTTTAATCCATTTACCTTCACCATTGGGACACGTGGGAACT GTGAACCCATTGTTTCTGCCATGATATTGTGGATCATTATCTGTCTTATGAAAGGTCGTGTGTTACAGTCAGCATTTTGG TATGGAGTTGTTGTCCATTTCAGGATTTATCCTATAATTTATGCTATTCCTATAATCCTGGTTCTTGATCCGAACTTCTT CCCATCTGGTCAGAAACCTGTCCTACGGAGCTGGAGTGCTGTTCAGGGAGAGAGACCGAATGATGGGGATGGCTGGTGTG CTTCACATAATTTATTAAAAAACTTGTTCACAAGGGACAGGCTGATATTTGGACTGGTCTCAGGATTGGTTTTCTTCTTC TGCACTGGTCTGTTATTCTGTTTATATGGGTGGGAGTTTCTACATGAAGCACTGCTGTACCATCTTACTCGTACAGATCC AAGGCACAACTTTTCCATCTATTTCTATCACATATATCTCCAGTACGGGCATGATATTTCAGTGTTGGAAAAGCTTATCT CCTTTTTGCCGCAGTTTGTGGTTCAGCTTGTTCTCATTTTCCGCTTTGCACAGGATTTACCATTTTGCCTATTTGTGCAG ACTGTGGCATTCGTGGTGTTCAATAAGGTGATTACAGCACAATATTTCGTTTGGTTCTTTTGCTTGCTGCCTCTAATACT CCCATGGAGTAAAATGAAGCTTAAATGGGATGGATTGTCTTGTATTCTTTTGTGGGTTGGAGCTCAGTCCCATTGGTTAA TGTGGGGCTACCTGCTTGAGTTCAAGGGTAAAAATGTCTTCTTACAGCTTTGGATGGCTGGTTTAGTGTTTCTAGCAGCC AACATATTCATCCTTGTCATGATTATCCGCCAACATAGATGTACTTCAGTTTTTAGATCTTTAGAGCATGTCCAGTCCAA GAATGTTGAAAAGCTTGAGTGA
Protein sequence (LotjaGi3g1v0315600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLLDIRSLLLFSAVFRVILIVYGEWQDAHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFLLIPNSFVHS AWGKFLFSSSDILVGYFIYNILKLRKVPENICNYSVMTWLFNPFTFTIGTRGNCEPIVSAMILWIIICLMKGRVLQSAFW YGVVVHFRIYPIIYAIPIILVLDPNFFPSGQKPVLRSWSAVQGERPNDGDGWCASHNLLKNLFTRDRLIFGLVSGLVFFF CTGLLFCLYGWEFLHEALLYHLTRTDPRHNFSIYFYHIYLQYGHDISVLEKLISFLPQFVVQLVLIFRFAQDLPFCLFVQ TVAFVVFNKVITAQYFVWFFCLLPLILPWSKMKLKWDGLSCILLWVGAQSHWLMWGYLLEFKGKNVFLQLWMAGLVFLAA NIFILVMIIRQHRCTSVFRSLEHVQSKNVEKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| PANTHER | 4 | 420 | 417 | 3.4E-177 | ||
| Phobius | 6 | 26 | 21 | - | – | |
| Phobius | 27 | 37 | 11 | - | – | |
| Phobius | 38 | 57 | 20 | - | – | |
| Phobius | 58 | 76 | 19 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 77 | 99 | 23 | - | – | |
| Phobius | 100 | 110 | 11 | - | – | |
| Phobius | 111 | 130 | 20 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Pfam | 128 | 409 | 282 | 6.3E-75 | ||
| Phobius | 131 | 135 | 5 | - | – | |
| Phobius | 136 | 152 | 17 | - | – | |
| Phobius | 153 | 158 | 6 | - | – | |
| Phobius | 159 | 182 | 24 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 183 | 227 | 45 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 228 | 251 | 24 | - | – | |
| Phobius | 252 | 291 | 40 | - | – | |
| Phobius | 292 | 310 | 19 | - | – | |
| Phobius | 311 | 321 | 11 | - | – | |
| Phobius | 322 | 347 | 26 | - | – | |
| TMHMM | 325 | 347 | 23 | - | – | |
| Phobius | 348 | 358 | 11 | - | – | |
| Phobius | 359 | 378 | 20 | - | – | |
| Phobius | 379 | 389 | 11 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 390 | 409 | 20 | - | – | |
| Phobius | 410 | 433 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring hexosyl groups | Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi3g1v0315600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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