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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0320000 |
| Transcript ID | LotjaGi3g1v0320000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutaredoxin family protein; TAIR: AT5G13810.1 Glutaredoxin family protein; Swiss-Prot: sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865; TrEMBL-Plants: tr|A0A1J7H9S3|A0A1J7H9S3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0320000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67958177..67960032) extracted from Lotus japonicus Gifu genome v1.2.
CTTAATCATTGTTCTTCTAATCTTCTCTCTCCCCAAAAGGCAAAGGTAAATGATAAAAGAAATAAAATAACCCCATTTCT CTTTTTCAATTAAAGTTCTTGCCTTCATAACTACGACTCTCTCTCTCTCTCTCTTTCCTTTTCTCTCTCTCACTCCCCCT CATCCACAAAAAACACATTTCATTTGTAATTGTAGTATTTCCTCAACATCAACAACCTAAACAAACACAGAAAACACCAC ACCTCCAACGACACAAAACAAACAAACAAACCAACCAACAAATCCCAAAACACACCATCCACCTCAATAACGACAACAAC CCACACAAAAATACACAACCACCGTCCAAGTTCCCTCCGCCGCCCACCACCGCCGTATCATTCCACCCACCACCACCGCC CCTTCTCTCTTTTCTCAAGGTACAACACAAAACACCTAATCAAAAAAAAAAAAATTCAAAAATTTAATCATTTTTCCAAA GATTGAAACTTTTGTTTTTTCTTTGAACAGGGTCGATGGCAGAATTTGGAAACAACATCAACAACAACAACACGACGTCG TCTCGTTTTCAATTCTTCAACCGTTCTCTCACCACGGTTCGCTCGATCAACGACGGAAAACCACCGTCGCAGAAACCGCA GAATCTCGAACGCGCCGCCTCGCTCCGCGGCAAGGTTGTCAAGAAGCTCTGCAGTTTATTCGAGCCTCCGAAGCCAGCTC CTCCTGCGGAGGATTTCGCCAGCAAACTCAAATCCCTAAAATCAATCGAATCTTCCGATGGGGAATCGCTTTCCGGCAAG CTAAAACCCGCGAAATCGGTTGATTCTTCGCCGGTGATTCGGTTACCGGGGACTGAGGATCGGATTGTTCTGTATTTCAC GAGCTTGCGCGGGATTCGGAGGACCTATGAGGATTGCTATGCTGTGAGGATGATCTTCAGGGGATTTAGGGTTTGGGTTG ATGAGAGGGATGTGTCGATGGATTGTGCTTACAAGAAGGAGTTGATGGGGTTGTTTGGGGAGAAGAATATGAGGAATGTG GTTTTGCCTCAGGTGTTTATACGAGGGAGGTGTGTTGGTGGTGCTGATGTGATCAAGCAGTTGTGTGAGGTTGGTGAGCT GGGGAAGATTTTGGAAGGTTTGCCGAGGACGAAGCCCGGGTTTGTGTGTGAGAGCTGTGGGGATATGAGGTTCGTGCCGT GTGGGAATTGCAGTGGGAGCAGGAAAGTGTTTGATGATGATGAAGGGTTGTTGAAGAGGTGTTTGGAGTGTAATGAGAAT GGTTTGCTTCGGTGTCCCAATTGTTCGTCGAATTGATTGATTGCTTTGGTGTTTGTAAAATTGTCACACTGGATGTGTAG CTGTTGCTGTTTTTGCAATTGCAGCTTGTTATGTGTTTTAGGTGTTGATGAATAATTTGATGAAGATGGAGGGGTTTGGG TTGTGGATAATGCTGGTGAGGATGATGATGATGATTAAGGGTTTGGTTAAGGTTATGTCATTGTCATATGATTCAAAGCA CTCTTTGAATTTCATATGATTGTTTTTTTCTTTTTTATTATTGGAATTGTATTATGAGCTGATTGATTAATGGTGTCTTC AGCTCCTTGAACAGCATTTTGTTCAAGAACAAGAATAGTGTGTTTATCTCCCACACGAGAGGGAAAAAAGGGTTTGAGTA TGGTGTTGTAGTTTACTCGAGGTGAGGAGTGGTTTCTCCTCAAGGCGATGTAAATATTTTAGTATTATGATTCTGCAAGG GATTTGCAAACATTGACCATTGAAGTTTATAAATGAGAGTGGCTTGCTTTTCCATGCCTTGTTTCTATGAATCTATTTCT GTTCTTATATGTGACA
CDS sequence (LotjaGi3g1v0320000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAATTTGGAAACAACATCAACAACAACAACACGACGTCGTCTCGTTTTCAATTCTTCAACCGTTCTCTCACCAC GGTTCGCTCGATCAACGACGGAAAACCACCGTCGCAGAAACCGCAGAATCTCGAACGCGCCGCCTCGCTCCGCGGCAAGG TTGTCAAGAAGCTCTGCAGTTTATTCGAGCCTCCGAAGCCAGCTCCTCCTGCGGAGGATTTCGCCAGCAAACTCAAATCC CTAAAATCAATCGAATCTTCCGATGGGGAATCGCTTTCCGGCAAGCTAAAACCCGCGAAATCGGTTGATTCTTCGCCGGT GATTCGGTTACCGGGGACTGAGGATCGGATTGTTCTGTATTTCACGAGCTTGCGCGGGATTCGGAGGACCTATGAGGATT GCTATGCTGTGAGGATGATCTTCAGGGGATTTAGGGTTTGGGTTGATGAGAGGGATGTGTCGATGGATTGTGCTTACAAG AAGGAGTTGATGGGGTTGTTTGGGGAGAAGAATATGAGGAATGTGGTTTTGCCTCAGGTGTTTATACGAGGGAGGTGTGT TGGTGGTGCTGATGTGATCAAGCAGTTGTGTGAGGTTGGTGAGCTGGGGAAGATTTTGGAAGGTTTGCCGAGGACGAAGC CCGGGTTTGTGTGTGAGAGCTGTGGGGATATGAGGTTCGTGCCGTGTGGGAATTGCAGTGGGAGCAGGAAAGTGTTTGAT GATGATGAAGGGTTGTTGAAGAGGTGTTTGGAGTGTAATGAGAATGGTTTGCTTCGGTGTCCCAATTGTTCGTCGAATTG A
Protein sequence (LotjaGi3g1v0320000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEFGNNINNNNTTSSRFQFFNRSLTTVRSINDGKPPSQKPQNLERAASLRGKVVKKLCSLFEPPKPAPPAEDFASKLKS LKSIESSDGESLSGKLKPAKSVDSSPVIRLPGTEDRIVLYFTSLRGIRRTYEDCYAVRMIFRGFRVWVDERDVSMDCAYK KELMGLFGEKNMRNVVLPQVFIRGRCVGGADVIKQLCEVGELGKILEGLPRTKPGFVCESCGDMRFVPCGNCSGSRKVFD DDEGLLKRCLECNENGLLRCPNCSSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 265 | 265 | 6.3E-123 | – | |
| PANTHER | 1 | 265 | 265 | 6.3E-123 | – | |
| ProSiteProfiles | 105 | 213 | 109 | 16.056 | ||
| Gene3D | 111 | 208 | 98 | 1.6E-14 | ||
| SUPERFAMILY | 112 | 207 | 96 | 6.15E-18 | ||
| CDD | 116 | 260 | 145 | 8.36402E-70 | – | |
| Pfam | 118 | 187 | 70 | 4.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Protein disulfide oxidoreductase activity | Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi3g1v0320000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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