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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0332300 |
| Transcript ID | LotjaGi3g1v0332300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT1G55690.3 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|Q501H5|SFH13_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH13; TrEMBL-Plants: tr|A0A0B2P1J0|A0A0B2P1J0_GLYSO Sec14 cytosolic factor; Found in the gene: LotjaGi3g1v0332300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70143572..70151475) extracted from Lotus japonicus Gifu genome v1.2.
TTAATAAAGTGGGGTGCAAAGCCTAAGGGGTGGGGCACCAAACTCAATTCTCTGTTAGATCCAATGAATGAGTTGAACAA ATAAATGCAACCACGGATCCAAAACCATACTCTATTAATTATTATTTTTAACCTATGCTATGAAATATGAATATGATCCT CTTTCATATTCATATTCATAACGAATGCCTCTTGTTCAATCTTCATTTTTATTATTATTAATTAACTTCATTCACATCTC TCTCAAGCTCACTTCAATAAATAAATAAAAACCCTGCGTGTTTCAATTCAATTCAATTATTCAATTTTCATCGTTCACGT TTTCTGAATCGGGACGGAAATGCTTTCTTCTCGGTAATTCTCATCAAAGATCGAAACTTTCGATTTGCTTTTGTCTCAAA CGACAGGTTGTTTTCGTTTTCTCTTTCTGGGTAGGTTGGATTTTGTGCATTTGATTGAGGTTAGAGTTAGAATCAGTGAT CATGATGATACAGCTATGAAAATTTACATCTTGATTCTTCTATTGTGATTCTATTGTATTGATTCAATTCAATTACTCTG AATTTTTAATTTTTTTTTAATTTTTTTTTTAAGAGTTTGTGTGGCAATAGCATATTAGCATTGATCTTAATTAAATAGTT TGATGGTGAATTGGTGATGAACAAGTAGTGTATTAGCGATTTGGCGATTTTTCGTTGGTTAATTTTTATTTTTATTTATT TTTCACTACTTAGCAAAATGAAATGATTAAAGGTAGTGCTTTTTTTCTTCTAAATTGATACAGTTTTGATTTATTTGTTT ATTAATTTTTAGCCTGGTGTGTTATAGTTATTGGAGCTGAAGTTTATGAGGGAGTTTGCTGCGAATTCGACTCCCTGATT CTGAAATTAGGATCAACTGTCTTTGGTTTTCTGTTGGCCTATAATGTCAGGTATGCTCTGCTATCTGTCTATGTCTCTGT GCTTTCTGATTGGCATGGCTTTGTGAATGTGAGAAAACTGATCTAGTGTTTCACTGACTGTTCTTAAAATGTGATGGGAA AGGGTATGAAGGGCAATGTAGTACTGATGAAATTAGAGAGAGGAGATCGGATGTTGAGAACTCAGAAGACGAGAGGCGGT CGTCTAAAATTGGAACCCTCAGGAAGAAGGCAATGAATGCTTCGTCTAAATTCACCCATTCCCTTAAGAAAAGAGGAAAG AGGAAAATTGATTATAGGGTTCCGGCAGTATCCATTGAGGATGTAAGAGATGAGGGAGAGGAGACTGTGGTCCATGAATT GCGCCAAAGACTTATTGAAAGGGGATTGTTACCACCTAGGCATGATGACTACTATACATTGTTAAGGTATTTCCTCACTT CATTCAACCCTTGGGGAATTGTTGCTCACTTGTTTTCTATTCTGGTTTAAAGCACGCTATCTGATTTCAAGTATGTTATC ATATAAAACAAGCGTTCCTTTTTACCAACGCTCACTCATGTTGCACTCTACTTCCTTGTAGGTTTCTTAAAGCTCGGGAT TTTAACATTGAGAAGACAATTCAGATGTGGGAAGAAATGCTTTTGTGGCGAAAGGAATACGGAACTGATACCATCCTTGA GGTAAGGATTGTAATTTATGTTTTATCCATAAAAGATATAGTTTGCTATAGAGTTTAAACCACAAAATGCTTAGGTGTGT CAGAAGGACAATCAGTATTTCCTTTTCTATTCCACTTTCATAGATTACAAATCAAATTTGTTTCCTCTTTAATTTGAACA AGTTAGATATAAAGTCATTCAAATTCATGAGCTTCCACACCTTGCATCTTAAACTTTTGAAGGAACCAGTCCTTGACATG GAATTAAGGCTCAATGACCAAGCAAGTGGTCAGAAGTTCCATCTCCATAAAGTTAAATTTCTTCATCGTAATCATCACTG ACAACAACAACCAGCCCTTTTCCCACTAGGGGGATTTGTTGGCTACAGAGATCACACAATGCCATAATACAGTGTCATAT ATTAAGTTCAAAGATAGACTGTTCACTCTAAATCTCCTTTAATTGTTTTACTCAGAGTTTTCATCGGTTTCCCTTTACCT CTAACTATTTAACCATCCTTAATCTCATTAGTTTGGTTAACCCTCCTAACCAGTTCTTTTATGGGGCTTTTCTTCACATG CCCAAACCACCTAAGATTAGACTTTACCATCTTTTCTACAATATGAGCTATCTCAATCTTCTCTCTAATGATTGTATTCT AAGAACATCTGTAACAACTCATCCATTGTAACATTCTTGTCTCCGCGACGTTGAGCTTACTTTGTTGGCTTTTTACCATC AAACATTTAATCTCATATAACGTTGCATGTCTTAATCTTATAGTTGTGGAGAATAATTTTCCTTTGAGCTTGAGAGGCAC TCTTCTCTTGCAAATCAAACTCGAAGCATTCCTCCATTTATTCACTCTACCCGAATCCTATGGTTGACATTTCCCTCTGT GGCTTTATCTTCCCATCATTATGTATGGTAGATCCAAGGTACTTACTTAACTCATGAGATTTATGGTATGGTATGCTCTC CTAGTTTCACCTCTATGCTCGGCTAGGATTTGTATGTCTTTTGCTAAAGTTTCATTCCGTGTACTTTGTTTTACTTCTAC CCAGGCAAAATCTGTGCTTTTAAAGGCTTGTCTCCATATTTTTAACTTTCCATTTATTTCTTTTCTCAACTCTCCAATTC AGACTATATCATCTAGGAAAAGTATGCATTGTGACATTGTCTCTTGGATATGGTCAATAAGCACGTCTAGAACCAAGATA AAAAGTTAAGAGCTCAATGTTGACCCTCGATGCACACCTCAAGTTATTGGGAAATTCCTGTGTGCTTTATTGACATCTTG TGTCTTCACAGTCACACTAGTCATGGCCTCCTAGTATATTTTCTGATTTCTTGAAGTAAGAAATCCAAACTCCTTTCTTT TCCAGAGTCATCCACCAAACCTCTCTATCTAGTTTATTATTACGTCTTTTCCAAATCAATGAAAACTATGTGTTAGTCTT CTTGATTCCTCATCAATCTTCCTACCATGTATGTAGGTTATATGCTTGATCTCTCTGACATAAAAACCAAATTGATTTTC CATGATGTGGGTATCGTGTTGTAATCTCTATACAATTACTCTCTCCCAATGCATCATACCATGACTCATGAGTTTAATTC CTCTAGAATTTTTGTAGTTTTATTTGTCACCTTCGTTCTTAAAGATAGGGATTAAGGTAATGCTTCATTCCTTTGGCATC CGTTTAGGCCTCATAATGTTTTTGAACAATTTTTTAACCATCCAAAACCTTTCTCCTAACTCAATTAGTACCTAAGGAGG AGTATTATCTGGTCCAACTCTGTTACCATTAGTCTTGCTCTTCAACACTTAACCATAGAACCTTGAATTCTTCGACAGTA GGACTAATTTTGATCCTATCTAGTGTTAAGTCTATTAAGAGTTCAAAGAACACGCATGTCCATTATTATTTTATTTTTTC AACCTTGTGAGTCTCTTCCTATGTGCATTACATAGTTGGTTATAAGTCCAGAAAAAGAAGAGTAGGGTTATGTTAAGCAA TTGATAGCAAGTGTAGAATTTTCAATGTAATAAAAGTTAAATTTCATTGCAAGCTAAAAAGTATGCATTGTCTACACTCC CAAATAGCTCTCATGTGAGATGTGTTAGATATAAATTCATGGATGAGCCTCCACCAAACAACTTAAGCTTTTACAAGAGT TGAGATGTTGTTAGAATATGAAAATGATATCTAATGATACCTTGATCTTATCTTAGAGCAATTAAGGTAGTTTAGATTTT TCTTTAGATTGATTTCTTTAATTTCTTATTTATATTTAGTTAGGGCTAGGAATCCTAATTAGTTTCCTTATTTAACTAGA ATTAGGAGTCTACCCATTACTATAAATAAGAGTTAGTATTTTGTGTTGTAAGATTACACTCAGTAATATTTATTGTATTC CTTTTTCCTCTTTCTATATCTTAAAGAGTTCCATGCTCGCTACCCCCATTCTATACAATATCAAGCAAAATAACTCGTGT TTGAGGGGCATATTAGATGTAAACCCTCCAAAAGTATCTGATAGCTTAAGCATTTATTTAGGATTATAGGTCCTTGGTAG AACTTGAGAACAGAATTGTTTGCTTTTATAATCTTGGAGTATTTCAGTGTCCGTATATTTTGTGCTTGAAGATGTTTGAC ACATATTTTATTGGCTCTAATGCGATTGTTATCTCTGAAGGAATTTGAGTTTGAAGAGCTAGAAGAAGTATTGCAGTATT ATCCTCAAGGGTACCATGGAGTTGATAAGGAAGGTAGACCAGTTTACATTGAGAGGCTTGGGAAAGCTCATCCAAGTCGC CTGATGCGCATCACCACAATAGATCGATATTTGAAGTACCATGTCCAGGAGTTTGAAAGGGCTCTGCAGGAGAAATTTCC TGCATGTTCCATTGCAGCAAAGAGACGGATATTTTCAACAACAACAATATTGGATGTACAGGGGTTGGTATGTTGCATTA TACTGAATATTTTTTTTTATAAGTTATGGACCTCATCACTAATATCAGGTGCAATCCTGTTGATTTTTCTCTTTGCATCT TGTTGATAGTAGACTCCTTTTGTACTTGTCCTTTAAGAATTCTATCAAATATGGTATCTGCCTTAATAATTTGATAACCA ATCTATTCAGTGAAGAGGGGGGGGGGGGGGGGGGGGGAGGAGGTTGATCCTGCTCAGTTGTTTTTGTATTTTAGGAACTG CCTTGTTTTTAAGTTGTTGAAACATTTTTCTGCTTTGATTTTAGTTGTTATTTCATGTTTCATGTTTGATGCAGGGAATG AAAAATTTCACTCGTACTGCTGCCAATCTCTTGGCTGCTATGACAAAAATAGATACCAATTACTATCCTGAGGTTTGGTG TCGTTCCTGCCCAGAGTAACTTGTTTCTCAGCCCTTTTCCTTTCTCTACTAAACTTCATCATGTATATCTGCAGACTTTA CATCAAATGTATATTGTCAATGCTGGTTCTGGCTTTAAGAAGATGCTCTGGCCTGCTGCACAGAAGTTTTGTGATCCCAA AACTATTGCAAAGATACAGGTCAAGGATGTAATTCACAGCTAATAATATTTCACATGCTTTTTTCCTGCGATGGTACTCA TTTCATTTACATTCATTTCCCAAATTCTCAGATTCTTGACTCTAAGTCTTTATATAAATTACTGGAAGTCATTGACTCTA GGTATGCATCTGTGCTTTCATCGTGCTGCATTGTACTTGCTATCCAATTTATTGATTAATTTGGAATATTAGTTGTAATT TCTATTCAATTTATTAATCAATTTAGAGTTTGTAATTGAATATGTACAGTCAGTTGCCAGACTTTCTGGGTGGTTCATGT ACATGTCCCACTGAAGGTGGATGTCTCAAGACTAGCAAGGGTCCATGGAATGATCCTGATATCATTAAGGTAATGTTTCC TTGTTATCTTGTTTCGTAGTCTTCACATGTGTCAGGTTTTGAAGATACACATGCCTACATGGCATAGAATTACCTTGTCA ACCTATTATTTGGGCAACTAATGTAGATATTCTGCTTATAGCTGGTACATAGTGCTGAGGCAACATTGGTTAGGCAACTC TCTAGAGCGTCCAATGAACAACAGAATTTTGACTCCTTTCAAGTACACTCATTGAAGGCAAGTCTTATTCGTCTTGATAT CAGAAAGTTAACACTTCAGAAGTGTTGACTGCTTTACTGTAGATAATACTTACACTCATATTTTTCTTACTTCTACTCAT CTCTCAGGGTCGATGCAGTGATTCATCAACAGCAGAATCAGGGTCTGATATTAATGATTACTCCTCTCCGACCAGACAAA GGAGCAGTACTCATCTTCGTTTAGCCCCAGTTGATGAAGAAGTCAGTTTTAAAACATTGACTATTAATTTGTTTTATAAT CCTCAATATTGTCTTTACATACTGCATTTACATTATTTGTGGTTGTGTCTTGAGCCTGTAATCATTCATCAGGTTGTGCC TTCTTCAGGTCAGGGTACCAGATCTAAATGGCTACTACAGCTGTGACGATAGTGCTCCCACAACTGAGAAAGTAGTAGAA AATGGTCAGTTTCACCTTTCTCAGAAGCAATCATTGCAAACTAACGACATGGAGAATGTTACTCATAGGACGATTTCAGA AGGTATTGTTAGAAAATTGCTGGGGCAGTTGTAGTGTAGAATGTTCCTTTTATATATGCTGATTAGAACCCATGTTGCAC ATATACCTCGTCAAATTTAGATGAGGAAGTTGGAAACACATGCTGGCTATTTTCCGTGCTAGGTTTAACTGATATTATTG GTGCAAGTATTTCAGTATTATCGTCTGAACTCAAGGTAATTCAATTTCTTGTCAGGTACTTCAGTCAACAATTTGTTCCG CATCATTAAGGAAATAGTAGAGAAGACAAATCATTTATATGTGACTAGAGTGCTCGCATCTTTCATGGAAAGACTCATTA CATTCATCCGCAGTTTAAGATTTGAGTTTTGGAGAACACAGAACAATGTTCACCCATCAAATACCACGGAACATAACATT AATAACCATTCAGCCGCTGTTGAAGCAGCTTTTGAAAGAGATCATATTCTTCCTTGTGCACAACGGCTTCAGAGACTAGA AAAAGTATTTGAGGAACTGAACAACAAACCTTATGGTATGCCCCTGGAAAAGGAGAAAATGCTAATGGATTCCATGGATA GGATCAAATCTGTTGAATTTGACCTTGAAAAAACAAAGCGGGTATCTTTCATCAATCATCTATGACTTCTGATTATGCTG ATCTGATGGTATGGTGTTTAAAATTTGCACTTTAACTGCAGGTATTGCATTCTGCAGTGAAGCAGCAGCTTGAGATTGCT GACTTGGTGGAGAACTTGCAGAAATCAAACTGTCGAGTAAGTTGGTCACTGTACGATATTTTACATATTTGATTTTTATC AAGGCTACTTATTCTATGAGGACTTCATCTTAATGAATTTTGTTATTTTTTAACATGAGTTCATATCTTTAGCTTTTTTA AAATTATTTTAACAACAATTACTCTTGCAGCAAAGAAGGCTATTCTGTTGAATCATCTCATCTGAGTTTCAGAGACAAGA GCTCTTTACACCACACAAGAATACTTCCTTTAAATATCAGATTTACTTACACGTAGATTGGACACAAGGAAGCCTGAGGC AGGGAGTACAAAATCAAAGCCTAATAACACAGAGACCTGGGGAGCATACACAGTACAGAGTTCACTTTGTATTATAAATA TATAATTTAGGTTTCATGTCAAATGCTTTCCCCTCATATTCCACAGTAAATAGGTGACAAAAACTTTGTAGTTTTGCTTG GACGATATGTTTTTAATGTAGAGAATAGAAAGATAATAGAAAAGTTTATAATGCCGAAAAAGGTTTTTGAAAAATATTTG GCTGACACTGAAATAATAAATCAGCAGATAGTGTGTGACAATTGTCTATTTTCTCTATCCACAACTCCACAAGTGTAAGG TTTGGTTAGTACTCAAACTGATCTGACTATTACTACGTAGATCAACAAGATTGTCTAAATGTTGAATATTTGTGGATTAG ACCAAAAGAATTGATTTGATTATCACAAATAAGAGACATTGATGAGTGCACCAAGTTAGGCTAATAATAAGTGCTATGTT GAGCAGTGAGAAATCGGGCATATATGTTGTGTGTCCACAAAGAATCAATGCAGAGTGATTTTTTTTATCTTCATCTACCA AAAATGAGAAATCTAAATCATCTATAATTTGTTGTACATTTTAGGCAACTCAATGGCATGTCAG
CDS sequence (LotjaGi3g1v0332300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGGTATGAAGGGCAATGTAGTACTGATGAAATTAGAGAGAGGAGATCGGATGTTGAGAACTCAGAAGACGAGAG GCGGTCGTCTAAAATTGGAACCCTCAGGAAGAAGGCAATGAATGCTTCGTCTAAATTCACCCATTCCCTTAAGAAAAGAG GAAAGAGGAAAATTGATTATAGGGTTCCGGCAGTATCCATTGAGGATGTAAGAGATGAGGGAGAGGAGACTGTGGTCCAT GAATTGCGCCAAAGACTTATTGAAAGGGGATTGTTACCACCTAGGCATGATGACTACTATACATTGTTAAGGTTTCTTAA AGCTCGGGATTTTAACATTGAGAAGACAATTCAGATGTGGGAAGAAATGCTTTTGTGGCGAAAGGAATACGGAACTGATA CCATCCTTGAGGAATTTGAGTTTGAAGAGCTAGAAGAAGTATTGCAGTATTATCCTCAAGGGTACCATGGAGTTGATAAG GAAGGTAGACCAGTTTACATTGAGAGGCTTGGGAAAGCTCATCCAAGTCGCCTGATGCGCATCACCACAATAGATCGATA TTTGAAGTACCATGTCCAGGAGTTTGAAAGGGCTCTGCAGGAGAAATTTCCTGCATGTTCCATTGCAGCAAAGAGACGGA TATTTTCAACAACAACAATATTGGATGTACAGGGGTTGGGAATGAAAAATTTCACTCGTACTGCTGCCAATCTCTTGGCT GCTATGACAAAAATAGATACCAATTACTATCCTGAGACTTTACATCAAATGTATATTGTCAATGCTGGTTCTGGCTTTAA GAAGATGCTCTGGCCTGCTGCACAGAAGTTTTGTGATCCCAAAACTATTGCAAAGATACAGATTCTTGACTCTAAGTCTT TATATAAATTACTGGAAGTCATTGACTCTAGTCAGTTGCCAGACTTTCTGGGTGGTTCATGTACATGTCCCACTGAAGGT GGATGTCTCAAGACTAGCAAGGGTCCATGGAATGATCCTGATATCATTAAGCTGGTACATAGTGCTGAGGCAACATTGGT TAGGCAACTCTCTAGAGCGTCCAATGAACAACAGAATTTTGACTCCTTTCAAGTACACTCATTGAAGGCAAGTCTTATTC GTCTTGATATCAGAAAGTTAACACTTCAGAAGTGTTGA
Protein sequence (LotjaGi3g1v0332300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGYEGQCSTDEIRERRSDVENSEDERRSSKIGTLRKKAMNASSKFTHSLKKRGKRKIDYRVPAVSIEDVRDEGEETVVH ELRQRLIERGLLPPRHDDYYTLLRFLKARDFNIEKTIQMWEEMLLWRKEYGTDTILEEFEFEELEEVLQYYPQGYHGVDK EGRPVYIERLGKAHPSRLMRITTIDRYLKYHVQEFERALQEKFPACSIAAKRRIFSTTTILDVQGLGMKNFTRTAANLLA AMTKIDTNYYPETLHQMYIVNAGSGFKKMLWPAAQKFCDPKTIAKIQILDSKSLYKLLEVIDSSQLPDFLGGSCTCPTEG GCLKTSKGPWNDPDIIKLVHSAEATLVRQLSRASNEQQNFDSFQVHSLKASLIRLDIRKLTLQKC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 38 | 38 | - | – | |
| PANTHER | 1 | 371 | 371 | 4.7E-241 | – | |
| PANTHER | 1 | 371 | 371 | 4.7E-241 | – | |
| MobiDBLite | 9 | 33 | 25 | - | – | |
| Gene3D | 63 | 130 | 68 | 4.1E-15 | – | |
| SUPERFAMILY | 72 | 138 | 67 | 4.32E-19 | ||
| Pfam | 95 | 122 | 28 | 3.7E-7 | ||
| SMART | 98 | 123 | 26 | 2.7E-8 | ||
| Gene3D | 131 | 344 | 214 | 3.0E-70 | ||
| SUPERFAMILY | 142 | 339 | 198 | 3.27E-52 | ||
| ProSiteProfiles | 143 | 318 | 176 | 25.199 | ||
| SMART | 143 | 315 | 173 | 1.4E-53 | ||
| Pfam | 146 | 313 | 168 | 3.6E-31 | ||
| CDD | 147 | 312 | 166 | 9.52424E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0332300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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