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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0347200 |
| Transcript ID | LotjaGi3g1v0347200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase; TAIR: AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; Swiss-Prot: sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase; TrEMBL-Plants: tr|A0A0P0HD57|A0A0P0HD57_MEDSA Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyl transferase; Found in the gene: LotjaGi3g1v0347200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72477090..72477984) extracted from Lotus japonicus Gifu genome v1.2.
CTGACTGGACTATTTGCAGGTAACACATTTCAAATGTGGAGGTGTCTCCTTAGGTGTTGGTATGCAGCATCATGTAGCTG ATGGAGCTTCAGGTCTCCACTTCATCAACACATGGTCAGATGTAGCTCGCGGCCTGGATGTTTCCATCCCACCCTTTATC GACCGGACACTCCTCCGAGCCCGAGACCCGCCTCGGCCGGCTTTTGAGCACATTGAGTACAAACCCCCACCATCCATGGC AAAACCTGGCTCAGATAGTTCAGAGGTCTCTATCTTCAAGCTGACCCGCGACCAGCTCAACACACTGAAAGCCAAGTCCA GAGAAGAAGGCAACACAATCAACTACAGCTCCTATGAGATGCTAGCTGGTCACGTGTGGCGATCCGTGTGCAAGGCGAGA GCGCTTCCGGAGGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGGCTAGGCTGCAACCTCCTCCCCCACCTGG TTACTTTGGCAATGTGATCTTCACCACCACGCCTTCAGCTGTGGCTGGTGATCTCATGTCAAAACCAACATGGTACGCTG CGAGCAGAATCCACAATGCCTTGTCGCGGATGAATAACGAGTATCTGAGATCTGCCCTAGACTATCTAGAGCTGCAGCCT GATCTTAAAGCGCTGGTTCGCGGAGCACATACTTTCAGGTGTCCGAATCTCGGTATCACTAGCTGGGCTAGGCTTCCAAT TCATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCGTACGAGGGGCTGTCTTTCATCA TTCCAAGCTCAACAGGTGATGGGAGCTTATCCGTCGCGATAGCTCTGCAGCCTGAGCATATGAAGGTGTTTAAGGATTTG CTCTATGACATTTGA
CDS sequence (LotjaGi3g1v0347200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCATCATGTAGCTGATGGAGCTTCAGGTCTCCACTTCATCAACACATGGTCAGATGTAGCTCGCGGCCTGGATGT TTCCATCCCACCCTTTATCGACCGGACACTCCTCCGAGCCCGAGACCCGCCTCGGCCGGCTTTTGAGCACATTGAGTACA AACCCCCACCATCCATGGCAAAACCTGGCTCAGATAGTTCAGAGGTCTCTATCTTCAAGCTGACCCGCGACCAGCTCAAC ACACTGAAAGCCAAGTCCAGAGAAGAAGGCAACACAATCAACTACAGCTCCTATGAGATGCTAGCTGGTCACGTGTGGCG ATCCGTGTGCAAGGCGAGAGCGCTTCCGGAGGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGGCTAGGCTGC AACCTCCTCCCCCACCTGGTTACTTTGGCAATGTGATCTTCACCACCACGCCTTCAGCTGTGGCTGGTGATCTCATGTCA AAACCAACATGGTACGCTGCGAGCAGAATCCACAATGCCTTGTCGCGGATGAATAACGAGTATCTGAGATCTGCCCTAGA CTATCTAGAGCTGCAGCCTGATCTTAAAGCGCTGGTTCGCGGAGCACATACTTTCAGGTGTCCGAATCTCGGTATCACTA GCTGGGCTAGGCTTCCAATTCATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCGTAC GAGGGGCTGTCTTTCATCATTCCAAGCTCAACAGGTGATGGGAGCTTATCCGTCGCGATAGCTCTGCAGCCTGAGCATAT GAAGGTGTTTAAGGATTTGCTCTATGACATTTGA
Protein sequence (LotjaGi3g1v0347200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPAFEHIEYKPPPSMAKPGSDSSEVSIFKLTRDQLN TLKAKSREEGNTINYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPSAVAGDLMS KPTWYAASRIHNALSRMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAY EGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 273 | 273 | 8.8E-130 | – | |
| PANTHER | 1 | 273 | 273 | 8.8E-130 | – | |
| Pfam | 1 | 272 | 272 | 4.2E-58 | ||
| Gene3D | 1 | 55 | 55 | 3.1E-17 | ||
| Gene3D | 56 | 277 | 222 | 1.3E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi3g1v0347200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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