Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0348500 |
Transcript ID | LotjaGi3g1v0348500.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Galactoside 2-alpha-L-fucosyltransferase; TAIR: AT2G03210.3 fucosyltransferase 2; Swiss-Prot: sp|O81053|FUT2_ARATH Fucosyltransferase 2; TrEMBL-Plants: tr|A0A0B2P4Q1|A0A0B2P4Q1_GLYSO Galactoside 2-alpha-L-fucosyltransferase; Found in the gene: LotjaGi3g1v0348500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72604157..72607130) extracted from Lotus japonicus Gifu genome v1.2.
TGCATGTGCAGCAAGTTTTAATATTCTCAACATTGATTCAAACATACACTCCATCTTCTATTTTCTTAATATTATTTTTG TTCAAGAAAACACACAACTAAGAAATTCAATTATTTGTTAGAAGGGATCATCTAACTCACCATGAGGATATCTCAATCCT AGTAGACCAATAACATTATTCATTCAAAATAAGTGAAAGAATTGTAAAATTTCTATTTCTGTTATGTTGTTGGAATTATT TTATAAACTTTCAATTTTGGCTTTTAGCCTTTGTACTACTTAGACATGAAGACTTTTCTTTTGAAGAGCACGAAGATATT TATTATACTTAAGAAATGGTAGTTGGGTACAAGTGTATAATTGAAATAGTGATACTTCATATATGAGAACTCAGGTAGTA TCTTCTAATATTACAATGAAGCCAAGCTCCAATTAGAAGCAGGTGGTGACATTTAAAGGGTCTGTTCACTTCAACACCGC CAAGCCGTTTGTAAATCATGGAAATCCTTCAAACCGCACTGGACAAGATGGAGCAGAGTTTCAAGAGATTCATGACACCC TTTGCTGTATTTTTCATAGCTTTTCCTATTCTCATAGTCACTCTCATCATGTACAGAAACTCAAACTCTACACTTTTTGA GGGTGTATCAGAAAGCGTTGAACTCGGTGCAAAAACTCATAATGTTTCAAATGAGTTGGGAAGTACAGGGTCAAACAACA CAACCAACGGTGGTGGTTTTCCATTGGGGGGAAAAGCAAGAGTGCATAATATATCAGATCAGAATATAGGAGATGGAATT GAAAGGCATAATAAAACTGTGTCAGAGGTATGTAACAGTCTAAAACCTGTTTTTGCGTCAGAATTTTCTGATTAATTTTC ATTCTTACTTCCTTCTCCTCTGAATTTTTGTTACATACCAAAACTCACTCTACTGCCTGATGGGTTTGGTGAAGTTAAGG TCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATCTCTCATCCAAA GTAGGTACGTCACACATGGAACGGCTTAAATCATTTTTTTTGGGGAACTTGTCTATGTTTCTCTCACTAATCTCTATCTA TCTATCTACCTCAAATTTACAGGCTCCAAAAATGACTCCCTTGTTGTTACAAGTTCAACAAATGATTCAACAGCGCGTGT TGAAATCCGTCAAAACGAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTCATGAATCATCATGCTTAAGCAGAT TTCAATTCCACTTATACCGCAAAGCTTCTCCTCACATACCCTCTCCATATTTGATATCTAAATTAAGAAACTATGAAGAA ATTCATAGAAAGTGTGGACCAAATACTAGAGCTTTCGACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGC TATTGCTACAATGTGTAAGTACCTTGTCTGGACACCTGCCAATGGTTTAGGAAACCAAATGATTAGCATAGTTGCAACAT TTCTCTATGCAATCCTCACAGACAGAGTGTTGCTTGTGAGATTTGGGAAAGATAAACATGGTTTGTTTTGCGAGCCATTT CTCAATTCAACTTGGATACTACCTCAAAACTCTCCATTTTGGAATGATAATCATGTTGAAACATACAAGAGCCTGCTAGA GAAGAACAAGAGTAACAACACTTCAAAGGGGCATTTACCATCCTCCGTGTTTCTTCATCTACAACACACCCGCGATGATC CTGAGAAGTTTTTTCACTGCGACCACAGTCAAGATCTTCTCAAGAAGGTTCCTTTGTTGATTTTGCAGTCAGATCAGTAT TTTGTCCCATCTCTGTTCATGACTCCATTTTTCAATTCCAAGATTGACAAAATGTTCCCAGAAAAAGACACAATTTTCCA CCATTTGGGGCGCTACCTTTTTCACCCTTCAAATGAGGCATGGAGACTAATCAGTGGATTCTATCAGAAAAACTTGGCCA AAGCAGATGAGAGAATAGGCCTACAGATAAGAGTATTTAATCCTGCCACTCCAAAACAATCAGTTATGGAATTAATTTTT AGCTGCATCATTAAAAATCAGCTATTACCAGAAGTACTTGGTATGAAAAATTCAGTGTCTTCTAGTAGCAAAAACAAGAC TGTAAAAGCTGTTTTAGTGGCATCTTTATATCCAGAATATGGTGAGAATTTAAGGGCTATGTATCTGAGAAAACCAACAG TAACAGGGGAAGTAGTGGAGGTTTATCAAGCAAGTCATGAAGAACATCAAAAGTTCAATGATAACATGCATAATATCAAG GCCTGGGTGGACATGTATCTACTGAGTTTATCTGATGTGTTGGTCACTACCTCTCTATCTACTTTTGGTTATGTTGCTCA GGGTTTGGGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCGGGTAACGAAAAACATTTTCCAACCTGCAAACGGGACT TCTCAATGGAACCTTGTTATCATATTCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTT GGTTATTTGATGAAATGCAAGGATTTTTCTTTTGGAGTGAAGCTGGTCAATGGTTCTGTGTAGGTCTTGTTTGTTTCATC TTTCATGGTTAAAATTATTTTTTCAATTTGCTTAAAATCTTACGCAAACCATGGGTTCATTCATATATTGTTAGATGGAA ATAGTTCTGTGGCATGAAATCTTGACAACGAAAAGGGATGAATTCATAGCCATTGTCCTATGATTGCTTGATTTTATTTA TTCAGTTTACCTTGAAAAGTTGAACAACTACTCTCCTTGATTCATTCTCATACTACAACAAAACTCACGTGTGTTTGATA TATTATCTAGTATACGTTTGATTGAATAAGATCTAATTAATTAAACATGATATAATAAGATCTGATAAAAATAAAATATT ATACTGTGTTTAGA
CDS sequence (LotjaGi3g1v0348500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATCCTTCAAACCGCACTGGACAAGATGGAGCAGAGTTTCAAGAGATTCATGACACCCTTTGCTGTATTTTTCAT AGCTTTTCCTATTCTCATAGTCACTCTCATCATGTACAGAAACTCAAACTCTACACTTTTTGAGGGTGTATCAGAAAGCG TTGAACTCGGTGCAAAAACTCATAATGTTTCAAATGAGTTGGGAAGTACAGGGTCAAACAACACAACCAACGGTGGTGGT TTTCCATTGGGGGGAAAAGCAAGAGTGCATAATATATCAGATCAGAATATAGGAGATGGAATTGAAAGGCATAATAAAAC TGTGTCAGAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATC TCTCATCCAAAGTAGGCTCCAAAAATGACTCCCTTGTTGTTACAAGTTCAACAAATGATTCAACAGCGCGTGTTGAAATC CGTCAAAACGAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTCATGAATCATCATGCTTAAGCAGATTTCAATT CCACTTATACCGCAAAGCTTCTCCTCACATACCCTCTCCATATTTGATATCTAAATTAAGAAACTATGAAGAAATTCATA GAAAGTGTGGACCAAATACTAGAGCTTTCGACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTATTGCT ACAATGTGTAAGTACCTTGTCTGGACACCTGCCAATGGTTTAGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTA TGCAATCCTCACAGACAGAGTGTTGCTTGTGAGATTTGGGAAAGATAAACATGGTTTGTTTTGCGAGCCATTTCTCAATT CAACTTGGATACTACCTCAAAACTCTCCATTTTGGAATGATAATCATGTTGAAACATACAAGAGCCTGCTAGAGAAGAAC AAGAGTAACAACACTTCAAAGGGGCATTTACCATCCTCCGTGTTTCTTCATCTACAACACACCCGCGATGATCCTGAGAA GTTTTTTCACTGCGACCACAGTCAAGATCTTCTCAAGAAGGTTCCTTTGTTGATTTTGCAGTCAGATCAGTATTTTGTCC CATCTCTGTTCATGACTCCATTTTTCAATTCCAAGATTGACAAAATGTTCCCAGAAAAAGACACAATTTTCCACCATTTG GGGCGCTACCTTTTTCACCCTTCAAATGAGGCATGGAGACTAATCAGTGGATTCTATCAGAAAAACTTGGCCAAAGCAGA TGAGAGAATAGGCCTACAGATAAGAGTATTTAATCCTGCCACTCCAAAACAATCAGTTATGGAATTAATTTTTAGCTGCA TCATTAAAAATCAGCTATTACCAGAAGTACTTGGTATGAAAAATTCAGTGTCTTCTAGTAGCAAAAACAAGACTGTAAAA GCTGTTTTAGTGGCATCTTTATATCCAGAATATGGTGAGAATTTAAGGGCTATGTATCTGAGAAAACCAACAGTAACAGG GGAAGTAGTGGAGGTTTATCAAGCAAGTCATGAAGAACATCAAAAGTTCAATGATAACATGCATAATATCAAGGCCTGGG TGGACATGTATCTACTGAGTTTATCTGATGTGTTGGTCACTACCTCTCTATCTACTTTTGGTTATGTTGCTCAGGGTTTG GGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCGGGTAACGAAAAACATTTTCCAACCTGCAAACGGGACTTCTCAAT GGAACCTTGTTATCATATTCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTTGGTTATT TGATGAAATGCAAGGATTTTTCTTTTGGAGTGAAGCTGGTCAATGGTTCTGTGTAG
Protein sequence (LotjaGi3g1v0348500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEILQTALDKMEQSFKRFMTPFAVFFIAFPILIVTLIMYRNSNSTLFEGVSESVELGAKTHNVSNELGSTGSNNTTNGGG FPLGGKARVHNISDQNIGDGIERHNKTVSEVRDQKIQNVTAATEGTVTANNNNLSSKVGSKNDSLVVTSSTNDSTARVEI RQNEDKLLHGLLASGFHESSCLSRFQFHLYRKASPHIPSPYLISKLRNYEEIHRKCGPNTRAFDRSIVKIVRSKNNGAIA TMCKYLVWTPANGLGNQMISIVATFLYAILTDRVLLVRFGKDKHGLFCEPFLNSTWILPQNSPFWNDNHVETYKSLLEKN KSNNTSKGHLPSSVFLHLQHTRDDPEKFFHCDHSQDLLKKVPLLILQSDQYFVPSLFMTPFFNSKIDKMFPEKDTIFHHL GRYLFHPSNEAWRLISGFYQKNLAKADERIGLQIRVFNPATPKQSVMELIFSCIIKNQLLPEVLGMKNSVSSSSKNKTVK AVLVASLYPEYGENLRAMYLRKPTVTGEVVEVYQASHEEHQKFNDNMHNIKAWVDMYLLSLSDVLVTTSLSTFGYVAQGL GNLRPWLLQRLAGNEKHFPTCKRDFSMEPCYHIPPKHFCNGKPIEDFASSFGYLMKCKDFSFGVKLVNGSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 630 | 630 | 1.5E-278 | – | |
Phobius | 1 | 20 | 20 | - | – | |
PANTHER | 1 | 630 | 630 | 1.5E-278 | ||
TMHMM | 21 | 39 | 19 | - | – | |
Phobius | 21 | 39 | 19 | - | – | |
Phobius | 40 | 631 | 592 | - | – | |
Pfam | 150 | 599 | 450 | 1.0E-174 | ||
Gene3D | 413 | 571 | 159 | 9.2E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Galactoside 2-alpha-L-fucosyltransferase activity | Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Biological process | Cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
Expression pattern of LotjaGi3g1v0348500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…