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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0348600 |
| Transcript ID | LotjaGi3g1v0348600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Galactoside 2-alpha-L-fucosyltransferase; TAIR: AT2G03220.1 fucosyltransferase 1; Swiss-Prot: sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase; TrEMBL-Plants: tr|A0A0B2P4Q1|A0A0B2P4Q1_GLYSO Galactoside 2-alpha-L-fucosyltransferase; Found in the gene: LotjaGi3g1v0348600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72630322..72632742) extracted from Lotus japonicus Gifu genome v1.2.
CTCCAATTAGAAGTTGGTAGTATCTTGTAATATTTTATATCTTGTAATATTACAATGTAGTATCTTGTGACATTTAAAGG GTTTGTTCACCACCGCCTAGCCGTTTGTAAATCATGGAAATCCTTCAAGCCACTCTGGACAAAATGGAGCAGAGTTTCAA GAGATTCATGACACCCTTTGTTGTATTTTTCCTAGCTTTTCCTGTTCTAATAGTCACTCTAATCATGTACAGAAACTCAA ACTCAACACTTTTTGAGGCTGTATCAGAAAGCGTTGAACTCAGAGCAAAAACTCATAACATTTCAAATGATGAGTTGGGA AGTACAGGGTCAAACAACACAACCAACGGTGGTTTTCTATTGGGGGGAAGAGGAAGAGTGCATAATATATCAGATCAGAA CATAGTAGGAGATGGAATTGTAAGGCACAATAGTTCTGTGTCAGAGGTATGTAACAGTCTAAAACCTGTTTTTGCATCTG AATTTGCTGATTAAATTTCATTCTTACTCCCTTCTCTGAAAACTCACTAAAACTCACTCTACTGCCTCATGGATTTGGTG AAGTTAAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATCTC TCATCCAAAGTAGGTACGTTCTTCAATCAATTCTTTTTTGGGAACTTGTCTATGTTTCTTTCTATAATCTCTATCTATCT ACCCCAAATTCACAGGCTCAAAAAATGACTCACTTAATACAAGTTCGACAAATGATTCAGCAGCGCATGTTGAAATTCCT GATGTCAAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGGTACAATCCCA ATTTTATGGCAAAGCTTCTCCTCATAGACCCTCTTCATATTTGGTATCTAAATTAAGGAACTATGAAAAAATTCATAGAA AGTGTGGACCAAATACTAGAGCTTACAACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTGTTGGTACA ATGTGTAAGTACCTTGTTTGGACACCTGCCAATGGTTTGGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTATGC AATCCTCACTGACAAAGTGTTGCTTCTGAGATTTGGGAAAGATAAACATGGTTTATTTTGCGAGCCTTTTCTCAATTCAA CTTGGATTTTACCTCAAAAATCTCCATTTTGGAATGATAATCAGGTCGAAACATACAAGAGCATGCTAGAGAAGGACAAG AGTTACAACACTTCAAAGGGGCATTTACCATCCTCTGTGTTTCTTAATCTAGCACACACCCGCGATGATCCTGAGAAGTT TTTTCACTGCGATCATAGTCAAGAACTTCTAAAGAAGGTTCCTTTGTTGATTCTGCTGTCAGATCAGTATTTTGTCCCTT CTCTTTTCATGACCCCAATTTTCAGTTGGGAGATTAACAAAATGTTCCCAGAAAAAGACACACTTTTCCACCATTTGGGG CGCTACCTTTTTCACCCTTCAAATGAGGCTTGGAGTCTAATCACCGGGTTCTATCAGAAAAACTTGGCTAAAGCAGATGA GAGAATAGGCCTACAGATTAGAGTATTCAATCATGCTTCCACTCCAAAACAATCAGTTATGGAATTAATTTTGAGCTGCA TCATTAAAAATCAGCTAATACCAGAAGTACTTGGTATGCAAAATTCAGTGTCTTCTACTAGCAAAAATCAGACTACAAAG GCTGTTCTAGTTGCATCTTTATATCCAGAATATGGTGAGAATTTAAAGACAATGTATCTGAGAAAAGAAACTGTATCAGG GGAAGTAGTAGAGGTTTATCAAGCAAGTCATGAAGAGCATCAAAAGTTCAATGATGACATGCATAATATAAAGGCCTGGG TGGACATGTATCTACTGAGTTTATCTGATGTTTTGGTGACTACCTCTCGATCTACTTTTGGTTATGTTGCACAAGGTTTG GGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCCGGTAACGAAAAACATTTTCCAACTTGCAAAAGGGACTTCTCAAT GGAGCCTTGTAATCATTATCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTCGGTTATT TGAGGAAATGCGAGGATTCTTCTTTTCAGGTGAAGCTGGTCAATGGTTCTGTGTAGATCTTGTTTGTTTCATCTTTCATG GTTAAAATTATTTTTTCAATTTGCTTAATTTCTTACGCAATCCATGGATTCATCATATATTATTAGATGGAAATACATTT TGTGGCATGAAACCTTGACAACGAAAAGGGATGAATTCATCCTATGATTGCTTGATTTTATTTATTTAGTTTACCTTGAA AAATTAAACAACTACTTTCCT
CDS sequence (LotjaGi3g1v0348600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATCCTTCAAGCCACTCTGGACAAAATGGAGCAGAGTTTCAAGAGATTCATGACACCCTTTGTTGTATTTTTCCT AGCTTTTCCTGTTCTAATAGTCACTCTAATCATGTACAGAAACTCAAACTCAACACTTTTTGAGGCTGTATCAGAAAGCG TTGAACTCAGAGCAAAAACTCATAACATTTCAAATGATGAGTTGGGAAGTACAGGGTCAAACAACACAACCAACGGTGGT TTTCTATTGGGGGGAAGAGGAAGAGTGCATAATATATCAGATCAGAACATAGTAGGAGATGGAATTGTAAGGCACAATAG TTCTGTGTCAGAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATA ATCTCTCATCCAAAGTAGGCTCAAAAAATGACTCACTTAATACAAGTTCGACAAATGATTCAGCAGCGCATGTTGAAATT CCTGATGTCAAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGGTACAATC CCAATTTTATGGCAAAGCTTCTCCTCATAGACCCTCTTCATATTTGGTATCTAAATTAAGGAACTATGAAAAAATTCATA GAAAGTGTGGACCAAATACTAGAGCTTACAACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTGTTGGT ACAATGTGTAAGTACCTTGTTTGGACACCTGCCAATGGTTTGGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTA TGCAATCCTCACTGACAAAGTGTTGCTTCTGAGATTTGGGAAAGATAAACATGGTTTATTTTGCGAGCCTTTTCTCAATT CAACTTGGATTTTACCTCAAAAATCTCCATTTTGGAATGATAATCAGGTCGAAACATACAAGAGCATGCTAGAGAAGGAC AAGAGTTACAACACTTCAAAGGGGCATTTACCATCCTCTGTGTTTCTTAATCTAGCACACACCCGCGATGATCCTGAGAA GTTTTTTCACTGCGATCATAGTCAAGAACTTCTAAAGAAGGTTCCTTTGTTGATTCTGCTGTCAGATCAGTATTTTGTCC CTTCTCTTTTCATGACCCCAATTTTCAGTTGGGAGATTAACAAAATGTTCCCAGAAAAAGACACACTTTTCCACCATTTG GGGCGCTACCTTTTTCACCCTTCAAATGAGGCTTGGAGTCTAATCACCGGGTTCTATCAGAAAAACTTGGCTAAAGCAGA TGAGAGAATAGGCCTACAGATTAGAGTATTCAATCATGCTTCCACTCCAAAACAATCAGTTATGGAATTAATTTTGAGCT GCATCATTAAAAATCAGCTAATACCAGAAGTACTTGGTATGCAAAATTCAGTGTCTTCTACTAGCAAAAATCAGACTACA AAGGCTGTTCTAGTTGCATCTTTATATCCAGAATATGGTGAGAATTTAAAGACAATGTATCTGAGAAAAGAAACTGTATC AGGGGAAGTAGTAGAGGTTTATCAAGCAAGTCATGAAGAGCATCAAAAGTTCAATGATGACATGCATAATATAAAGGCCT GGGTGGACATGTATCTACTGAGTTTATCTGATGTTTTGGTGACTACCTCTCGATCTACTTTTGGTTATGTTGCACAAGGT TTGGGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCCGGTAACGAAAAACATTTTCCAACTTGCAAAAGGGACTTCTC AATGGAGCCTTGTAATCATTATCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTCGGTT ATTTGAGGAAATGCGAGGATTCTTCTTTTCAGGTGAAGCTGGTCAATGGTTCTGTGTAG
Protein sequence (LotjaGi3g1v0348600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEILQATLDKMEQSFKRFMTPFVVFFLAFPVLIVTLIMYRNSNSTLFEAVSESVELRAKTHNISNDELGSTGSNNTTNGG FLLGGRGRVHNISDQNIVGDGIVRHNSSVSEVRDQKIQNVTAATEGTVTANNNNLSSKVGSKNDSLNTSSTNDSAAHVEI PDVKDKLLHGLLASGFDEASCISRVQSQFYGKASPHRPSSYLVSKLRNYEKIHRKCGPNTRAYNRSIVKIVRSKNNGAVG TMCKYLVWTPANGLGNQMISIVATFLYAILTDKVLLLRFGKDKHGLFCEPFLNSTWILPQKSPFWNDNQVETYKSMLEKD KSYNTSKGHLPSSVFLNLAHTRDDPEKFFHCDHSQELLKKVPLLILLSDQYFVPSLFMTPIFSWEINKMFPEKDTLFHHL GRYLFHPSNEAWSLITGFYQKNLAKADERIGLQIRVFNHASTPKQSVMELILSCIIKNQLIPEVLGMQNSVSSTSKNQTT KAVLVASLYPEYGENLKTMYLRKETVSGEVVEVYQASHEEHQKFNDDMHNIKAWVDMYLLSLSDVLVTTSRSTFGYVAQG LGNLRPWLLQRLAGNEKHFPTCKRDFSMEPCNHYPPKHFCNGKPIEDFASSFGYLRKCEDSSFQVKLVNGSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 631 | 631 | 1.8E-272 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 631 | 631 | 1.8E-272 | ||
| TMHMM | 21 | 39 | 19 | - | – | |
| Phobius | 21 | 39 | 19 | - | – | |
| Phobius | 40 | 632 | 593 | - | – | |
| MobiDBLite | 123 | 153 | 31 | - | – | |
| Pfam | 148 | 600 | 453 | 3.0E-174 | ||
| Gene3D | 413 | 572 | 160 | 4.7E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactoside 2-alpha-L-fucosyltransferase activity | Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
Expression pattern of LotjaGi3g1v0348600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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