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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0361000 |
| Transcript ID | LotjaGi3g1v0361000.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-oxoglutarate-dependent dioxygenase; TAIR: AT1G52820.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9ZTA3|AOP1C_ARATH Probable 2-oxoglutarate-dependent dioxygenase AOP1; TrEMBL-Plants: tr|I3T4I6|I3T4I6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0361000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74388912..74393242) extracted from Lotus japonicus Gifu genome v1.2.
TGACAATATAAATCGTACACGGTACTAAATAACTTAATCAGTAGCACTGCAGGTAATCAATCACGATTGGGTTCAAATCT TAGCTTAAATACGCATTGCATTGTCATCAATCTTGTAATCAAAATTAGAGAGGGAAATTAAGTGAAGATATGGGCTCAGA AACCACACGAAAGCTTCCTGTAATTGACTTCACTGACCTCAATAGCTTGGCTAATTGGGAGGCAGTGAAATCCAAAGTTC ACGAGGCATGCACTAGTTGAGTATGGTTGCTTTGAAGCCATTTTTGATAAAGTTCCTTTAGACCTTCGCAAGGAAATTTT TGCTTCACTAGAAGAGCTTTTCAATCTCCCTCTGCAAACCAAGCTACTCAATGTGTCTAAGAAGCCATATCATGGTTATG TTGGGCAGTATCCTATGGTTCCACTTTTTGAGAGCATGGGCATTGATGATGCAAATGTCTATGAGAAAGTAGAAGCCATG GCCAACATCTTGTGGCCTGATGGAAACCCAAGTTTCAGGCATGTACTCAATATAATTTCTTTCTTGTTTTAAGTTTTTGG TGCTTATATATTTCCTATTTTGCCCATTTCTTATTAATTTTCTTTCAATTTGGCAGCAAAACTATAAATTCATTCTCTGA GCAGCTATCAGAGTTGGATCATATTATTAGGAAGATGGTTTTGGAGAGTTTGGGTGTTGAAAAGTACTTGGATGAGCATC TCAACTCAACCAATTACCTCCTCCGGGTTATGAAATACAAAGGCCCTGAAACCTCTGACACAAAGCTAGGCCTCACCACT CACTCAGACAAAAACATTGTGACCATATTGTACCAAAATCAGGTGGAGGGTTTGGAGGTGCTCACCAAAGATGGCAAATG GATAAGCTACAAGCCTTCCTCCGAAAGTTTCGTTGTTATGATCGGTGATTCTCTCCATGTAAATTCCTATTCACCTTTTC TAATTAAAACAAATAAATAATAAACCATACCATCTACCAACAGCTACTAGATTCGAATGGTATACATGTCCGATTCTGCT TAAGCAGAGTCTCAAGTTTGAGAATTGTAAATGGAAAAAATTATGCTGGCAGAATTAATCATGGTTTTAAGATATCCATT GTGGTGTTGCCATGGTGGAATCTCATTGCGGGGTTTTGACTCTCTAGTACCATGATGATATTCCGCCATTAGCTATCATT ATGTGTAAAATATATGGCGGGTTTTTGGTTCTTTGGCATAGTCCGTCATCCGTCGTTTACAACATTAGAACTAGCTACCA CTATGATGTGAAGTTCCTGACTTAAACAGAATTGCATGCCTCTAGTATTATAGTATATAATTATTATCATTTTTTTATGA TTGAATCATATTGGAAATTTGTAATTTATGAGATACTCATGTGAAATTCTCAGGCATGGTCAAACGGGAGGTTGCATTCA CCCTTTCACCGAGTGATGATGACTGGGAACAAGGCAAGATACTCTACAGGGTTGTTCTCTATTCCGAAAGGAGAACACAT CATAAAAACACCGGAGGAGCTGGTGGATGAGGAGCACCCTTTGCTATTTAAACCTTTTGATCATGTTGAGTTCCTCAAGT ATTATTACATTGAAAAGGGTCGGGTCAGAGAGGCCAGTTCGCCCTGCGCACTTACTGTGGTGTTTGAATTGTTGTCATTG ACAGGGTAACATTACTCGCTTGTGTTATTCAAGTGTTCCCTAGACAAATTACCATGGACTTAATAAAACTCCTCCCTATA TGGACTTGCAGTCATTGAGTGTATAATAAGTGGTTTATGCTTAAATGTTGCTAGGCAATCTAATGTCAGTGACACTTAAA TTGAAACCTTTTAATTCAATTTATACATGACATGATTAGCATGCAAAACACATTTAATTTATATCCTTTTTTCCTGATTC TGTTTGGATAACTTTTTTCTTTCCATTTTATGAAGGATTAGTTCAATGATATAGTTGACACCATTGGAACACAAGAACAT CATGGAAGTTTACGTCTACTAACAACACTTAACACTTTTTGCTAAGATGTTTACCTCTAGGACTCTAAGGTTGTGTAAGT TGTATCCTTTTTTAATTAGTGTTTCTCCCCTTTAATGTCTTATTCATGTCATTTTAATTTCTTTTTGTTTTTGGCTTTTA ATTGAGCATGCTCATATTCATTTTATGAGCAGGTACATTCTTAAACACAAAGATTAACATCTGTTAAGCATTAGTGCAGG CAGATTTTTGAAGGGCTCCTATATCTCCATAGCCATTACCCTCCTGTTATCAATAGATCCCAACTGTGATAAAATATTCA TTAGTGGTAACCTAGGGGTAGTCAAAATTGATGATGTTGGCCCTCTCTGATTCTCGATAAGCCTAAAGCTGTTCATTATA TTGGTGGGTAAGACGACATCAAGGCCTTTAATTTTAGTCCAAGATGTGAATATAAACATGTGACCTTTTTTCTTCTTTAT TAGTAGTCTGTCTCGATTCAAATGCTTCGGTATGTACAGTGTGATTTGATTGTTGGAAATAAATTATAGTGAGAGCTTTA TAGATGGAAACATTAATAGTAAAGGAGTGTAATATAAGCACAACATGATATGATTGTTGGAAACAAATGTATGTATGATA TGTTTTGGTTTATTTAATTATTTATATTATTTTTACTTTTGGAGTTATGATCTTTTGATAAGTTTCAATAGAAATGATAC CTTTATGTTACCCTATTTTTATCCTCCAGAATCTCCATCCCTATCTTCTATATAAAAGTTTGCAATTTAATTTATCCTTT TCTGTATTGTATTTGGGTGGATCTAAATCGTGCTAGGCAAGGGACAAATCAATTATGTTTGATCTTAAGTTCTTTAGTGA GTACTCAAAACCGTTAAGTTGTACTCCTCATCTCTCTTTTGAGTAATAATCTAGATGGGAAGTTAAGTTATCTTGGTTGT TAGGTTGTACAAAGCTGTTTGATCAGGGGGCACTCATCCTCAATTTCTCACTCTTTCATAAATTTTGGTGCCAATATGTA ATCTGATCATTTTTTTCTTGCTCTTTACTTCTCAATTTGTATAAAACAATTTATTCCACGCTTCTTCTATACTAAACAAT AAATAAATAAATACATATACCTCTGCTTATGTACGGACATATATCAAATATATATATATATTCTATCATATCAATTTTGT TTTATCAAAATACAATAGAATCAATGTACATAGGATCACACACTTAGATTAAAGGTAGAGAAGCTGGCTTGATAATGATA TTTGGTCGACCTCTTCTTTAATATTTTAGGCTTAATAGCTATTTTGGTCCCTCACTTATCACAATTTTGCACTTTTGGTC CCTTTAGGAAAGAATTAGCAAAATTAATCCTCACATTTACACACTTTTGCAGTTTTAGTCTAAATAGGGATCATTTTTGC AAACAAATAAGCAATGTGGAGGACCAAAAGTGCTAATTTTTTTATTGGGGACCAAAAGTGCAAAACCGTGATAAGTGAGG GACCAAAAAAACTATTAAGCCAATATTTTATATAATACAATTGGAAACTGATTTTATGCAATAAGGACAAATGATAATAC ATTTGGCTGTTAAGGGCGAACCAAACTTAATATTGCTGAGTTATTCAATTAATGTTTATAAATAAGATGAAACATTAAGA CATAAAATGGAGATAATAACAACATATTTTACTAATTAAAAGTGTATGTTTAGTAAACATATCATTGTATTATTTCATAT ATAAATAAAGTACTCAATAATTATAATTAACAATTAATTTATTAAAAAATTACCCGTGCATCGCACGGGCAAACGGGCTC TATCCTAGTGAGTCTTAACTATGCAATCGACAGACTCAAATTTGGGCTTTGTTGGGGCCTTAACTATGCTGAGTTACACT GTGATAAATTCGGTAATTGTTGGGGTTTTATGTCCTTTGTTTTTTATGAGTTCCCTGCCGCCTATTCTGAGGTTTCTGTG CTGTGTTTGAACTCTTTCAATACTGGTTTGCTGGCTCTGGCTATGCTGGTCTGTTATGGTGCTTCTGGGGCTGTTTCTTT GATGCTTGAGGACGTGCTTTGGTGGTGCCTTGCCTCCTCTTCCTGGCTTACTCGTTGCCTTGCCCGTGGATTTTGCTGAG TTTTGATTGTTGGGCTCCTTGCTGGTTCATTGGAAAGTCGTGGCTTCGATTCAACTATGCTTTTTGTAGTCTTTAGAGCA TCTTCAATGCTAGTTCTTAGTTCTTAACACTATTCATGTGGGTCCTACAAGCCACATGTGCTTAAGCAATTCTTTGCAGA TTTTTTCCAAC
CDS sequence (LotjaGi3g1v0361000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTGGAGAGTTTGGGTGTTGAAAAGTACTTGGATGAGCATCTCAACTCAACCAATTACCTCCTCCGGGTTATGAA ATACAAAGGCCCTGAAACCTCTGACACAAAGCTAGGCCTCACCACTCACTCAGACAAAAACATTGTGACCATATTGTACC AAAATCAGGTGGAGGGTTTGGAGGTGCTCACCAAAGATGGCAAATGGATAAGCTACAAGCCTTCCTCCGAAAGTTTCGTT GTTATGATCGGTGATTCTCTCCATGCATGGTCAAACGGGAGGTTGCATTCACCCTTTCACCGAGTGATGATGACTGGGAA CAAGGCAAGATACTCTACAGGGTTGTTCTCTATTCCGAAAGGAGAACACATCATAAAAACACCGGAGGAGCTGGTGGATG AGGAGCACCCTTTGCTATTTAAACCTTTTGATCATGTTGAGTTCCTCAAGTATTATTACATTGAAAAGGGTCGGGTCAGA GAGGCCAGTTCGCCCTGCGCACTTACTGTGGTGTTTGAATTGTTGTCATTGACAGGGATTAGTTCAATGATATAG
Protein sequence (LotjaGi3g1v0361000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLESLGVEKYLDEHLNSTNYLLRVMKYKGPETSDTKLGLTTHSDKNIVTILYQNQVEGLEVLTKDGKWISYKPSSESFV VMIGDSLHAWSNGRLHSPFHRVMMTGNKARYSTGLFSIPKGEHIIKTPEELVDEEHPLLFKPFDHVEFLKYYYIEKGRVR EASSPCALTVVFELLSLTGISSMI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 156 | 156 | 1.4E-40 | – | |
| PANTHER | 1 | 156 | 156 | 1.4E-40 | – | |
| Gene3D | 1 | 151 | 151 | 2.6E-43 | ||
| SUPERFAMILY | 2 | 156 | 155 | 6.52E-47 | – | |
| ProSiteProfiles | 18 | 119 | 102 | 10.567 | ||
| Pfam | 20 | 116 | 97 | 1.9E-21 | ||
| PRINTS | 43 | 64 | 22 | 1.7E-5 | – | |
| PRINTS | 79 | 105 | 27 | 1.7E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0361000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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