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LotjaGi3g1v0361500.1

Overview

Field Value
Gene ID LotjaGi3g1v0361500
Transcript ID LotjaGi3g1v0361500.1
Lotus japonicus genome version Gifu v1.2
Description D-glycerate 3-kinase, chloroplastic; TAIR: AT1G80380.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q944I4|GLYK_ARATH D-glycerate 3-kinase, chloroplastic; TrEMBL-Plants: tr|C6TE37|C6TE37_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0361500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:74475462..74479765) extracted from Lotus japonicus Gifu genome v1.2.

GGACCTGTTTGTTTATTTATTTATTTTTATTGATATATATTTATATGGTCATCCTTTTCCATTATCATTATCATGTCCTT TCACTACTGTTACACCTGTACAGGAAAACAATCAAAACTGGCATAGACAAGGTTCAGCTTTGCTCCATTGCAGAAAGAAA GAGAGAGATATATAAAATGGCGACTTTGAATGTCTTATTATCTCAACCATGTCAGGCTACAACTTTGCCCTCTTTCTATT GTTCTAGTACTATTACTAACAATCATGCCTCTGACAATTGTAAACTGCATTTGTGTTCAAACTCTCGTAACTCCCCTCTC CTTTCTTCCCAATCAAACAGTTCTCAGTTCTCTAAAACCCTTACCCACTCCTCAAAATCAGGTACTTCTTCACTGTACTC AGTTTGCTTGATTCACTAGTAAGTGTGTTTGGATCATCATTGGTAGAATTGATTCTGGACAAAATTAATTCTACTAAATG TGTGTTAAAATGATGTGATTTATATTTGAATTCCAGTTTTTGTAGCGCAATGTTTTGAAATTCAATTGTAAACTTTCAGA ATTGATTATGTTCAATGCAGAACCAACTATATGCTGTGGCAAGTCGATCGAATTCTTGACACATGAAATCAATTTTACCA ATATACTCATTAGAATTGATTTTAACCAAGTAGAGGTGATTTGGCAACTAGATCCAATTCTTGTTTTCTATAATGTTGTT TGGGTGCTATATGGCATTGTATGAGGGAAAAGTCTAAACTGAATGTATCCCAGAACTGGATTAATTTACCTGCTGTAGGG AATGAGTGGAGTGGAAAATTTTGCAAGTTTTCATGTCTTTTTTGTTGTGAATTCAGTTAAATTTTTCATGCTTCTGAATA TCATATCTGGGATCTTTAATGTGCAATTTCAATTTCTTCCTCAGGCAGTGGAAGCTCATGGCTGCAACATGATTACACTA CAACTAGTATTGCTACTAGTAATGAGTACGGAGAGGGTCCTTTAAATTCGGTATTCCCTGCAAAATCTGCTCAAGTTTCC TCTGTGGAGGATCTTTATGAATTTATTTGCTCAGGACCTTTGCTAAACAAAATTGGTTTGACACAAGAGAAGGTGGCAGA GTCCATAGATAAGTGGCTATCATACGGTCGGTATCTATGCCAATTGTTTCAGCTTAATGAATTGTTTTTAACAGTGCCTC AAAAGATTCGGGTCTATCACTACTATATACCAGTCTTCCTCTGGTGTGAGGATCAGGTTGTTCAGCACCAAGCCATGGCA AAGAATAAAGAAGATACACCCCCTTTAGTGGTATACATTCCACAATTCTCTATCTTTTTATCTCTCATATTTTTGTTTTC TGTATGTGTGGTTCAAGTGGTACGAGTTTGTCTGTGAAATAAACCTCGCTAGGAGAGCTAGTCCCAGTCCTACCAAGATG CGGTTGCTCCCGGCTCAAACAGGACTGTCTCTCATGGAGGATACATGTGTTAGACCAACAAAGATTATAAATGTTCTGGA TCATTTGCTAAATTATAATGATATTCAAAATTGTTTTAGTTGTAGTAATTTTAATGAAGGTATACTTTTGCTGAGACTGC AACTAAAATTACAGAAAGCTTTTTTAATTTTATGATAACATACCTCTTAAATTTTTCACTCGGTATGGCTCAGATTGGAT TTAGTGCTCCCCAAGGCTGTGGAAAGACAACCCTTGTCTATGCTCTTGATTATCTTTTCAGGGTAACTGGGAGGTTTGTT CTGAACTTGGAAGAAACTGTGACTTTGAATTTATCCTTTGAAAGAAATGACTATCTAAAAGGGTTTTAGACATGAATTAA CAAATGGCTGATACTTGTTAAAATTTTCAGGAAGTCAGCAACAATATCCATAGATGATTTTTATTTGACAGCAGAAGGTC AGGTACATGGAATCCTTAATATACTTATACCTTTTTCCATTGATACTACCACCTTGATGTTTTTTCTTTTGCTTGGTTGA CAAATTATACATTTGGATTATAGAGTAAACTGAGAGAAGCTAATCCAGGAAATGCACTTCTTGAGGTAGCCATTCACATG TTTTGTGGAGTGATTAACTGAACAGTATATTTTGTACAATTGTTGAACAAGAATATTTTGCTTGACTTGTTCTTCGCAGT TTCGTGGAAATGCAGGAAGTCATGATCTTGCTTTATCTGTTGAAACTCTCACAGCTCTAGCAAAATTGACATCACCAGGT GTGTCTCCAACAGAACTTTTATCTTTTTAACATGTTGTATTTAGTTCATCATTTTTTGTTGTTTGAAGTTTCCAGGTATG AAGATGAAGCTACCAAGATATGATAAAGTAAGGGCATAACTTGCAATTTTTTTTGTTACTTAGCCAAATTTTTACTTCTT AGTTGCTGATGGTTATTTGTCTTGATTTGTAGTCTGCATTTAATGGAAGAGGTGATCGTGATGACCCTTCAAATTGGCCA GAAATTGAAGGACCCCTTAATGTAAGAAAACTTCAACTATGACTCTTTAGCTGTTTCTCACTTGTTAGGTTCATTTGGTA ACAAATGATCCAACACAGCAAAAATAAAAAATAAAAATAAAAATCTTGCTGAAGTGTACTTAGTTCTGAATATGATGATA TCCCGCTTTGAAAGGACTAGATTTGGGTGCAGAACTTAAATCATAATAAAATATGTGGCGTTAGTCTTGAAATGAAACAA ATTAAAATTGGTTATTTAATATCTCACTTCAATTTCTTTTCAATTTGTTGATCTTTCGATTGATGTGAATGGATGGCCCT TTAGGTTGTGTTATTTGAAGGCTGGATGCTAGGTTTCAAGCCCGTTCCAATGGAAGTTGTAAAGGCTGTTGATCCCCAGG TTAGAATTTTAGAATGACAAAATTTAGTTCTTTCTTCTTCTCACATTGAGTGCATGTTTGGAAATTATTCTGTAATTGAT TCTAAACCCAGGATTAGTTAGGGAGAAAAGCTTATGTCAGTGTTGCTTCTGAGTTTTGAGAATCGATAACGAGGAAAAAG AAGTTGATCCAAACTCTATAGGTTGTAGTAGCGTATTCTTATAATGGCAGGAAATATCACTTAATTGTGCTTGATTTTAC AGCTAGAAACTGTGAATAAAAACCTTGAAGCTTACTATGATTCATGGGACAAATTCATAAAGTCATGGATAGTCATCAAG ATTAAAGACCCAGATTGTGTCTACAATTGGCGTTTGCAGGTAGGCTGCTTTTAAAACCCCTTTCAAAAGTTATACAGTGT TTGTCTGTACAAAACCGGATTAGAATATTCTCATGTTACATAATAGTCTCGTGTAAACTTTGCATAAGTATTTAATAAGT ACGAAGAATGACAATGTGATGTGAAGTTTTCACATGAGATGATCCTGATCGGGACAGAACCTTATTGTGATTGCTGATTC AAATTTCACTTGTGTGATTCAAATTTCAGGCAGAGATTGCCATGAGGGAAGCAGGCAACCCTGGAATGTCTGATGAGGAG GTCTATTACCGATATGCATATATGTTCTTTTTATTACCTTCAACCAATGTCTAGTTTAAAATGACTCAAATTAACAAGAT AATGTGATGGTTGGTGCATTTCAGGTGAGAGATTTTGTTTCTCGGTACCTGCCAGCATACAACGCTTACCTTCCTACACT TTACTCTGAGGGTCCAAATGGGTCAGATCCACACCATCTGCTAACCATTGAGATAGATGAAGGCAGAAACCCCATCTTGG GTGACTAAGAGTACTAAATTAAGTTTGATCAGCAGAGGAGATAAATTAAGCTATGTTTATCATTTTCCTTGAAATGTGTT GTAAATATTTTCATTTAATACATGAATTACAGCTATTACTTTCTTGTTTTCCTTGAGAAAAAAGTGAAGAAAGTAATGGT AGAAGTGCTCAATACCTGAAGATTACTACTAGTCTACTAGTAATTGATAATGGCATTCTTTTACAATCCCAAACAGTTAT CAAGTAATTTTGAGTAATGTGTTTCTGCATTCAGATATCACTTTACATAACATTGGAACAGTTTCGTAAAAGAATCTTTG ATGGTTTAATAGGTCCTTTTGTCACTTTTTTTCTTTCTTTCTTTTGTCTGCAAACAATCATTCTATCTTTCCTCTACTTG GGCCCCGGGCTATCAGCTGAAGTGAAGAGAATTTTAGCTGAGGCCCATACTGACTCCTTCTTGCTGGGATAGGTTGACCT ATTTTGAATTTAAGAGAATTGACAGAAAAAAAAAAGAAGAAGAATTTATGAAAAGACCAGGGTG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0361500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTCATCCTTTTCCATTATCATTATCATGTCCTTTCACTACTGTTACACCTGTACAGGAAAACAATCAAAACTGGCAT AGACAAGGTTCAGCTTTGCTCCATTGCAGAAAGAAAGAGAGAGATATATAAAATGGCGACTTTGAATGTCTTATTATCTC AACCATGTCAGGCTACAACTTTGCCCTCTTTCTATTGTTCTAGTACTATTACTAACAATCATGCCTCTGACAATTGTAAA CTGCATTTGTGTTCAAACTCTCGTAACTCCCCTCTCCTTTCTTCCCAATCAAACAGTTCTCAGTTCTCTAAAACCCTTAC CCACTCCTCAAAATCAGGCAGTGGAAGCTCATGGCTGCAACATGATTACACTACAACTAGTATTGCTACTAGTAATGAGT ACGGAGAGGGTCCTTTAAATTCGGTATTCCCTGCAAAATCTGCTCAAGTTTCCTCTGTGGAGGATCTTTATGAATTTATT TGCTCAGGACCTTTGCTAAACAAAATTGGTTTGACACAAGAGAAGGTGGCAGAGTCCATAGATAAGTGGCTATCATACGG TCGGTATCTATGCCAATTGTTTCAGCTTAATGAATTGTTTTTAACAGTGCCTCAAAAGATTCGGGTCTATCACTACTATA TACCAGTCTTCCTCTGGTGTGAGGATCAGGTTGTTCAGCACCAAGCCATGGCAAAGAATAAAGAAGATACACCCCCTTTA GTGATTGGATTTAGTGCTCCCCAAGGCTGTGGAAAGACAACCCTTGTCTATGCTCTTGATTATCTTTTCAGGGTAACTGG GAGGAAGTCAGCAACAATATCCATAGATGATTTTTATTTGACAGCAGAAGGTCAGAGTAAACTGAGAGAAGCTAATCCAG GAAATGCACTTCTTGAGTTTCGTGGAAATGCAGGAAGTCATGATCTTGCTTTATCTGTTGAAACTCTCACAGCTCTAGCA AAATTGACATCACCAGGTATGAAGATGAAGCTACCAAGATATGATAAATCTGCATTTAATGGAAGAGGTGATCGTGATGA CCCTTCAAATTGGCCAGAAATTGAAGGACCCCTTAATGTTGTGTTATTTGAAGGCTGGATGCTAGGTTTCAAGCCCGTTC CAATGGAAGTTGTAAAGGCTGTTGATCCCCAGCTAGAAACTGTGAATAAAAACCTTGAAGCTTACTATGATTCATGGGAC AAATTCATAAAGTCATGGATAGTCATCAAGATTAAAGACCCAGATTGTGTCTACAATTGGCGTTTGCAGGCAGAGATTGC CATGAGGGAAGCAGGCAACCCTGGAATGTCTGATGAGGAGGTGAGAGATTTTGTTTCTCGGTACCTGCCAGCATACAACG CTTACCTTCCTACACTTTACTCTGAGGGTCCAAATGGGTCAGATCCACACCATCTGCTAACCATTGAGATAGATGAAGGC AGAAACCCCATCTTGGGTGACTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0361500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVILFHYHYHVLSLLLHLYRKTIKTGIDKVQLCSIAERKREIYKMATLNVLLSQPCQATTLPSFYCSSTITNNHASDNCK LHLCSNSRNSPLLSSQSNSSQFSKTLTHSSKSGSGSSWLQHDYTTTSIATSNEYGEGPLNSVFPAKSAQVSSVEDLYEFI CSGPLLNKIGLTQEKVAESIDKWLSYGRYLCQLFQLNELFLTVPQKIRVYHYYIPVFLWCEDQVVQHQAMAKNKEDTPPL VIGFSAPQGCGKTTLVYALDYLFRVTGRKSATISIDDFYLTAEGQSKLREANPGNALLEFRGNAGSHDLALSVETLTALA KLTSPGMKMKLPRYDKSAFNGRGDRDDPSNWPEIEGPLNVVLFEGWMLGFKPVPMEVVKAVDPQLETVNKNLEAYYDSWD KFIKSWIVIKIKDPDCVYNWRLQAEIAMREAGNPGMSDEEVRDFVSRYLPAYNAYLPTLYSEGPNGSDPHHLLTIEIDEG RNPILGD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285
211 480 270 5.8E-92 –
PANTHER
PTHR10285:SF162
211 480 270 5.8E-92 –
Gene3D
G3DSA:3.40.50.300
216 485 270 3.3E-78 –
SUPERFAMILY
SSF52540
234 467 234 3.7E-16
IPR027417

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0361500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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