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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0366400 |
| Transcript ID | LotjaGi3g1v0366400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endo-1,3(4)-beta-glucanase 1; TAIR: AT5G15870.1 glycosyl hydrolase family 81 protein; Swiss-Prot: sp|D4AZ24|ENG1_ARTBC Probable endo-1,3(4)-beta-glucanase ARB_01444; TrEMBL-Plants: tr|K7MWG8|K7MWG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0366400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75250662..75253475) extracted from Lotus japonicus Gifu genome v1.2.
ACATCAAGAGATACTCCTATGTACATACACAAAATCTTTTAACCCTAATCCTTATTTGACTTGAGCATCACGTTATCTTT TATAGCAGCCACCTCCGGCGCCGGCATGATCACCGGAATGAGTAAGCGTATTGGATGGAGTCTCTCTTGCTGCGTGTTGG TCTTCCTCGTCGCCGTGGTGGCGCGGTGGAGTTTCTCCTTATCGCCGCCGGAGCAACCCGATTCGTCCACAGAGCATACT GTAGTAACACCTTTCACATTCCCACAAGCTCACTCCACCGTTCTCCCTGACCCCTCCACCTTCTTCTCCCCCAACGCTCT CTCCACACCACCACCCACAAACTCGTTCTTCCAAAACTTCGCTCTCAAAAACGGTGACCAACCAGAGTACATTCACCCTT ACCTCATCAAATCTTCAAACTCCTCTGTTTCTGTCTCTTACCCTTCTCGCTTCTCCACCCCTGGTTTCACCTCCCAGGTC TTCATCTCCGATCTCACCATCTCCGCCGTGAAACCCCACCGCCACCACCACCACCACCACAGAATATCATCATATTCTGA TCTTGGTGTCACCTTGGATTACCCTTCTTCAAATCTTCGATTCTTCCTTGTCAGGGGAAGCCCCTTTGTGACATTCTCCG TCACCGAACCGACCCCTCTTTCCATCACCACAATCCACGCCATTCTCTCTTTCTCCTCCGATGACTCCCTCAGAAAGCAC ACATTTAGTTTCAACAATGGCCAGACTTGGATTCTGTACTCTTCTTCACCAATCAGGTTGAGTCATAGCCTCTCTGAGAT TTCCACTGATGAGGCCTTTTCCGGTGTGATTCGGATTGCGTTGTTGCCGGGTTCTGATTTGAAGAATGAGGCGGTTCTTG ACAGGTTTAGTTCTTGTTACCCTGTGTCTGGTGATGCTGTGTTTGCAGGAAAGTTTAGTGTGGAGTATAAGTGGGAGAAG AAAGGGTTTGGTGATTTGTTACTGTTGGCTCACCCTCTTCATGTTCAGCTTTTGTCTGATAGTGGTTCTGATGTTACTGT TCTGAGTGATTTTAAGTATAGCAGCATTGATGGGGAGCTTGTTGGTGTTGTTGGGGATTCATGGTCTTTGAAAACTGATC CTGTTTCTGTGTCTTGGCAGTCGACTAAGGGTGTGAGAGAAGAGTTGCGAGATGAAATTGTTTCAGCCCTTTTGAAGGAT GTTGAGGAGCTTGATTCATCTGCAATCACCACAGCTTCTTCATACTTTTATGGGAAATTGGTTGCAAGGGCAGCAAGGTT GGCGTTGGTAGCGGAAGAGGTGGGTTTCCTTGATGTGATTCCAAAGATTAGCGAGTTTTTGAAGGAAACCATTGAGCCCT GGCTGGATGGAACTTTTAATGGGAATGGATTTCTCTATGATAGCAAGTGGGGAGGGATTGTTACCAAACAAGGTTCTATT GATACCGGTGCTGATTTTGGGTTTGGAATTTATAATGATCACCATTACCATTTGGGGTACTTTGTTTATGGAATTGCAGT GCTTGCAAAGATTGACCCAGTTTGGGGTAGCAAGTATAAGCCTCAAGCCTATTCACTCGTGGCGGATTTTATGACATTGA GCAGAGGATCAAACTCTAACTACACGCGTCTGAGGTGTTTCGACCTTTATAAATTGCACTCATGGGCTGGAGGCTTAACC GAGTTTGCCGATGGAAGAAATCAGGAGAGCACTAGTGAAGCTGTTAATGCATATTACTCTGCAGCCTTGATGGGTTTGGC ATATGGTGACGCCGATCTTGTTGCTACTGGATCGACCCTTACAGCGCTCGAGATCCATGCAGCTAAAATGTGGTGGCATG TAAGAGAGGCAGATAACATATATGAGGCAGATTTTACCAAAGGGAACAAGATAGTTGGTATGGTATGGGCTAACAAGAGA GACAATGGACTATGGTTTGCTCCTCCTGAGTGGAGAGAGTGTAGGCTTGGAATTCAGCTCTTGCCCGTGCTTCCTATCTC TGAAGCTTTGTTCTCAAATGTTGATTTTGTGAAGGAGCTTGTGGAGTGGACTTTACCTGCTTTGAATAGGGAAGGTGTTG GAGAAGGATGGAAGGGGTTTGTGTATGCATTGCAAGGAGTTTATGATAACGAAGGTGCATTGCAGAAGGTAAGAAGCTTA AAAGATTTTGATGATGGAAACTCGTTGACTAATCTCTTGTGGTGGATTCACAGCAGAGGTGATGAAGAGAGCTCTCTTGG TCATTACTCCCAGTAGGTATTGTTGATAATTTAAAATATTTGAAAAGAAAATAAGATTTAATAGTTCTTACAAAGCCCAA CGAAAGCAAAGATCTGCTTAGTTTTACATTATCAAAGTTGGCTGATTCAAGTCCAATTAGCACCACTACAAAGCACATCC CAGTAGTTATTTCATTTACTGCAAGAACTATTAAACTTGCTTTACATAAGATATTAATAGTTCTAGCATTGTTTTGGTTG GGCTTTTTCTATGGTCATCTTTGCTTTTCGTATGGTACTTGTATCATACTTTTGGAGACGGATTGTTTACAACTGTTCAA GCTTTGGCGGAAACCTTCCGTTGGTAGATCTTATATGTTTTCGATTGTCGAGGATTGTCTGGACCTTTCTCTTGGTTTTT ATTTTGTGGAACTTAGTTTTCCTCGTAGGGGCGGCAATTGTGCTGCGGATTTTGTAGCTAGGAAAGTGTCTTTTTTTCCT AATACTGTGTTGGTGGAGGAGAATTGTCCTGGTTTTTTTCCTTTTATTCATGTACTGGCCTCTAGGCCTATTTCTCTTCA CAACTCAACTATGG
CDS sequence (LotjaGi3g1v0366400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCACCGGAATGAGTAAGCGTATTGGATGGAGTCTCTCTTGCTGCGTGTTGGTCTTCCTCGTCGCCGTGGTGGCGCG GTGGAGTTTCTCCTTATCGCCGCCGGAGCAACCCGATTCGTCCACAGAGCATACTGTAGTAACACCTTTCACATTCCCAC AAGCTCACTCCACCGTTCTCCCTGACCCCTCCACCTTCTTCTCCCCCAACGCTCTCTCCACACCACCACCCACAAACTCG TTCTTCCAAAACTTCGCTCTCAAAAACGGTGACCAACCAGAGTACATTCACCCTTACCTCATCAAATCTTCAAACTCCTC TGTTTCTGTCTCTTACCCTTCTCGCTTCTCCACCCCTGGTTTCACCTCCCAGGTCTTCATCTCCGATCTCACCATCTCCG CCGTGAAACCCCACCGCCACCACCACCACCACCACAGAATATCATCATATTCTGATCTTGGTGTCACCTTGGATTACCCT TCTTCAAATCTTCGATTCTTCCTTGTCAGGGGAAGCCCCTTTGTGACATTCTCCGTCACCGAACCGACCCCTCTTTCCAT CACCACAATCCACGCCATTCTCTCTTTCTCCTCCGATGACTCCCTCAGAAAGCACACATTTAGTTTCAACAATGGCCAGA CTTGGATTCTGTACTCTTCTTCACCAATCAGGTTGAGTCATAGCCTCTCTGAGATTTCCACTGATGAGGCCTTTTCCGGT GTGATTCGGATTGCGTTGTTGCCGGGTTCTGATTTGAAGAATGAGGCGGTTCTTGACAGGTTTAGTTCTTGTTACCCTGT GTCTGGTGATGCTGTGTTTGCAGGAAAGTTTAGTGTGGAGTATAAGTGGGAGAAGAAAGGGTTTGGTGATTTGTTACTGT TGGCTCACCCTCTTCATGTTCAGCTTTTGTCTGATAGTGGTTCTGATGTTACTGTTCTGAGTGATTTTAAGTATAGCAGC ATTGATGGGGAGCTTGTTGGTGTTGTTGGGGATTCATGGTCTTTGAAAACTGATCCTGTTTCTGTGTCTTGGCAGTCGAC TAAGGGTGTGAGAGAAGAGTTGCGAGATGAAATTGTTTCAGCCCTTTTGAAGGATGTTGAGGAGCTTGATTCATCTGCAA TCACCACAGCTTCTTCATACTTTTATGGGAAATTGGTTGCAAGGGCAGCAAGGTTGGCGTTGGTAGCGGAAGAGGTGGGT TTCCTTGATGTGATTCCAAAGATTAGCGAGTTTTTGAAGGAAACCATTGAGCCCTGGCTGGATGGAACTTTTAATGGGAA TGGATTTCTCTATGATAGCAAGTGGGGAGGGATTGTTACCAAACAAGGTTCTATTGATACCGGTGCTGATTTTGGGTTTG GAATTTATAATGATCACCATTACCATTTGGGGTACTTTGTTTATGGAATTGCAGTGCTTGCAAAGATTGACCCAGTTTGG GGTAGCAAGTATAAGCCTCAAGCCTATTCACTCGTGGCGGATTTTATGACATTGAGCAGAGGATCAAACTCTAACTACAC GCGTCTGAGGTGTTTCGACCTTTATAAATTGCACTCATGGGCTGGAGGCTTAACCGAGTTTGCCGATGGAAGAAATCAGG AGAGCACTAGTGAAGCTGTTAATGCATATTACTCTGCAGCCTTGATGGGTTTGGCATATGGTGACGCCGATCTTGTTGCT ACTGGATCGACCCTTACAGCGCTCGAGATCCATGCAGCTAAAATGTGGTGGCATGTAAGAGAGGCAGATAACATATATGA GGCAGATTTTACCAAAGGGAACAAGATAGTTGGTATGGTATGGGCTAACAAGAGAGACAATGGACTATGGTTTGCTCCTC CTGAGTGGAGAGAGTGTAGGCTTGGAATTCAGCTCTTGCCCGTGCTTCCTATCTCTGAAGCTTTGTTCTCAAATGTTGAT TTTGTGAAGGAGCTTGTGGAGTGGACTTTACCTGCTTTGAATAGGGAAGGTGTTGGAGAAGGATGGAAGGGGTTTGTGTA TGCATTGCAAGGAGTTTATGATAACGAAGGTGCATTGCAGAAGGTAAGAAGCTTAAAAGATTTTGATGATGGAAACTCGT TGACTAATCTCTTGTGGTGGATTCACAGCAGAGGTGATGAAGAGAGCTCTCTTGGTCATTACTCCCAGTAG
Protein sequence (LotjaGi3g1v0366400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MITGMSKRIGWSLSCCVLVFLVAVVARWSFSLSPPEQPDSSTEHTVVTPFTFPQAHSTVLPDPSTFFSPNALSTPPPTNS FFQNFALKNGDQPEYIHPYLIKSSNSSVSVSYPSRFSTPGFTSQVFISDLTISAVKPHRHHHHHHRISSYSDLGVTLDYP SSNLRFFLVRGSPFVTFSVTEPTPLSITTIHAILSFSSDDSLRKHTFSFNNGQTWILYSSSPIRLSHSLSEISTDEAFSG VIRIALLPGSDLKNEAVLDRFSSCYPVSGDAVFAGKFSVEYKWEKKGFGDLLLLAHPLHVQLLSDSGSDVTVLSDFKYSS IDGELVGVVGDSWSLKTDPVSVSWQSTKGVREELRDEIVSALLKDVEELDSSAITTASSYFYGKLVARAARLALVAEEVG FLDVIPKISEFLKETIEPWLDGTFNGNGFLYDSKWGGIVTKQGSIDTGADFGFGIYNDHHYHLGYFVYGIAVLAKIDPVW GSKYKPQAYSLVADFMTLSRGSNSNYTRLRCFDLYKLHSWAGGLTEFADGRNQESTSEAVNAYYSAALMGLAYGDADLVA TGSTLTALEIHAAKMWWHVREADNIYEADFTKGNKIVGMVWANKRDNGLWFAPPEWRECRLGIQLLPVLPISEALFSNVD FVKELVEWTLPALNREGVGEGWKGFVYALQGVYDNEGALQKVRSLKDFDDGNSLTNLLWWIHSRGDEESSLGHYSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 38 | 38 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 13 | 24 | 12 | - | – | |
| Phobius | 25 | 31 | 7 | - | – | |
| Phobius | 32 | 716 | 685 | - | – | |
| PANTHER | 36 | 707 | 672 | 0.0 | – | |
| PANTHER | 36 | 707 | 672 | 0.0 | ||
| Pfam | 70 | 344 | 275 | 1.3E-66 | ||
| Gene3D | 73 | 260 | 188 | 3.9E-21 | – | |
| Pfam | 351 | 701 | 351 | 2.2E-109 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | Catalysis of the endohydrolysis of (1->3)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3. |
Expression pattern of LotjaGi3g1v0366400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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