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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0375600 |
| Transcript ID | LotjaGi3g1v0375600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase, putative; TAIR: AT3G61080.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic; TrEMBL-Plants: tr|A0A0B2R660|A0A0B2R660_GLYSO Protein-ribulosamine 3-kinase, chloroplastic; Found in the gene: LotjaGi3g1v0375600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76822816..76826264) extracted from Lotus japonicus Gifu genome v1.2.
TGTGAATCATGTTTCAGTTATTTAACTAATGTGATTCAGAATTTCAGATCATGAGTGTTGGGGTAGGATTTCCAAGGTTT CTGAGCTTATTGTTCTTTACTAGTATGCAGCATGAGCATGAGTGAGGATCCTGTTCGTGAGTGGATTCTCTCTGAAGGGA AAGCAACAAAGATAACCAGAATCAGTCCTGTTGGTGGGGGATGTATCAATCTTGCTAGTCGCTATGATACTGACACTGGT TCTTTCTTCGTTAAAACAAACAGGTATAGTAAAATAGATTCATCCAACTGTTCTGGGGTTGAATTTTTCATTTTTGAGTG CATTGCATTGTTTCAATCATTTTTTTAGTTTTTTTTATAGGCAGATGTTAGTAAACTAGTCCCTCCTCAGGTTCAAACCC TGAAGCATTCACCCTTCATCCCACCCAACCCTTATGTCCCCTAGTTTCAATCATTTTTTTAGTTAAAGCTTCATTCCGTT TGTTTTACATTGCGGCTGATAGTTTAAAAACTTTATCAGGAGTATTGGGCCATCAATGTTTGAAGCAGAGGCTCTTGGTC TAGGAGCTATGTATGAAACAAGGACTATTCGTGTGCCTCAACCTTATAAGGTGAGATTATTTAACATTAGTGATGTGAAG GATACTATTTTTATTGTCTGCTGGAGGGAACTTGAGGTAACTTGTTGCTAGGAATTGTAGGTTGGACCCCTTCCTACTGG TGGTTCTTTCATCATTATGGAATTCATAGAATTTGGAGCTTCTAGGGGAGATCAGGTGAGCTACCTTAAAATAATTACTG CTGATTAGGAAAACTTTTTAAAACAATTGTTTTCTAATAAGCTGTTTGAAGGAATTGAAATTGAAATAGAACTGTCTTTT TTGTATACTATCCAATCGATCGCATCATATAGATATCCTTTCTACACAACATAGGTCATCGAAAAGATCTCAAAGACCCC TCCAGCTACAAGTCCTGATCTATACAAAACACACTGGGTTTTGGTGTTTCTGTTGGTTTCATTAAGATACCAAAGAAACA AGAACAACTACTACTACTAATTCATCAACTAATGTATTTCCAAAAAGTCGAAAACTAAGCAATATCGCAAATTGCGCCTT TTCCAATTGTTCAGCTCCCATGTTGGTCTCACCATGTTAGATATCCCTTCAATGCTCCAACCTGTCAGATGATCTCTGAG ATCAACTTTGTTCTCCGGGAAATCATTTTCCCTATAGTACATGACTTATGTGACTTCGATCTGAAACCTCTCGATTCAGA GAGGAAATGCGCATTTGTTTCACCTATCTATTCCATGACATTGAGAAGCAATAGGTCATTCCCGTCCAGTTGTAACGAAT CTGCAGTTCCAACCGCATATATACTATAAAAGTGGATTTGGTCTTGGCTAAGCCAATTTGGCGATCGTTTTTATAATTTA TTGCTTCCCAGTCTATTCTAGGGAGGAAGCTTGCTGAAATGCAAAAAGCTGGAAAATCTAGTAAAGGCTTTGGTTTCGAT GTTGATAATACCATTGGCAGGTATGTTACGCCTTCACCATTGGAGTCATCAAAGTTGGTTATTATTATAATTTTCATGAC TTTTCCATTTTACCTAGATATATTCTGCATGCCAGGAGATATCAGCTAAACAGCACACCAGTGTTTATGAGCAATTAAAA AGAGGTTTTTGTAGTATAGTACTAATGGATTTCTAACTACATTATGTATACTATGCTGTAGCACTCCACAAATAAACACC TGGTCATCAGATTGGGTTCAATTTTATGGAGAGCATAGATTGGGTTACCAGTTGAAACTGGCATTAGACCAGTATGGGGA CAGAACCATTTATGAAAAAGGTAATTTTGTTCTCATACTGTTCCCATATTGGCATTAGACTAGTATGTGTTACAATTTGG ATTCTTTATAAGTATTGACATATTTATATGTAACTACTTAATTTAACTATCTTCTGAATGTACTAAACTCCCCAATACGA TTTTGTGATTTATACCTGATATTCTGATCTACTTGTTCAACAGGACAGAGACTGGTGAAAAACATGAGACCCCTGTTTGA CGATGTAGTGATAGAACCGTGCTTGCTACATGGAGATCTATGGAGTGGAAACATCAGCTCTGACAAAAATGGAGAGCCTG TCATATTGGACCCAGCATGTTATTGTAAGTCAAGCATTTGTTAGGTGTTGTAAATACAAAGGAATTTTTTTCTCTAGAAG TTGCGGATAGTAGTGATTTTTTTATTAATATGGCCCCCCTATTCAATGCTTGGTGAATATGCTGAAACTTGTAGAGTAGA CTTCTACATGAGCTGAATAATCTCTTGTGAAGTTTCTTACAATGTGTTTGGAACCGAGTTTTGAGCCTCATACACAAGCG TCTAGATAGATTGTGTGCGCAATGTGGATCCAAACTCACAATTAGCCACTTAACTGTTGTGTCCATGGCTCATAATTTGT ATTTTCAGATGACTTGTAAAGTTTGAAATTACATTTAGAAAGACCTTATTGCTAGAATTGGAAGTGGAAACTAAAGCTCA TTTGAGATACAGCCCTTGAAGTATTAGGTGAAAGCTAGGTCCTCTAACTTCAGTTGTAAAGGGGGTGATCCAAATATATG AAACTGAAATAATCATCCAGTTTTTTATGGTAAATATGAACTGAGAGCTGTGGTGTCTGTTTGTCTTGTTCTGTAGATGG ACACAATGAGGCAGAATTTGGCATGTCTTGGTGTGCTGGCTTTGGAGGATCATTTTATAATTCTTATTTTGAGGTATTAT TGCCAGCTGACTTACACTACATTTTTTTCCTAAACTTCTCATTTTTTGCTGTGTTTCAAGTTAAAGTATATATAGTACAC AGGTTTGAAAGAAACATTGATCTGAAAGTTGATTAATATAATTTGTTTCTTTCCCCCATGGCATTTGTGAGTTCAACTCA ATCTGATCCTGTTGTAAACTTCTGAAATTGACAACATTTGTTTGTGTAATATCAAATTTATATGAAAAAATAAATAATGC TTCCAGCAATGTTTTAGGTCCAACCAATTTGCGTTATGTCAATTAAGATATAGACAAGATGGTTTTTCATGCACTTTTTG GAAAACAGTAAACCTCAACAATGTGGCAACTTGTTTGGCTTCTCAATATCCATGTCAAACTAGTTTATAGCTGGATTTCA TTGCCATGTTTTAAAGGAACCAAATCTTGGTATCCGATTGCCTTGCGAAATATCAATTTCATTCTATAGTTTTCTGATGA TGATTTCAAATGATCTCTCCAGGTGATGCCTAAACAGCCAGGCCTTGAGAAGAGGAGAGACCTTTATATGCTGTACCACT ATTTAAATCATTATAATCTATTTGGCTCCGGTTACCGCTCATCTTCCCTGTCTATCATTGATGATTATCTAGCACTTTTA AAAGCTTAG
CDS sequence (LotjaGi3g1v0375600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATGAGTGAGGATCCTGTTCGTGAGTGGATTCTCTCTGAAGGGAAAGCAACAAAGATAACCAGAATCAGTCCTGT TGGTGGGGGATGTATCAATCTTGCTAGTCGCTATGATACTGACACTGGTTCTTTCTTCGTTAAAACAAACAGGAGTATTG GGCCATCAATGTTTGAAGCAGAGGCTCTTGGTCTAGGAGCTATGTATGAAACAAGGACTATTCGTGTGCCTCAACCTTAT AAGGTTGGACCCCTTCCTACTGGTGGTTCTTTCATCATTATGGAATTCATAGAATTTGGAGCTTCTAGGGGAGATCAGTC TATTCTAGGGAGGAAGCTTGCTGAAATGCAAAAAGCTGGAAAATCTAGTAAAGGCTTTGGTTTCGATGTTGATAATACCA TTGGCAGCACTCCACAAATAAACACCTGGTCATCAGATTGGGTTCAATTTTATGGAGAGCATAGATTGGGTTACCAGTTG AAACTGGCATTAGACCAGTATGGGGACAGAACCATTTATGAAAAAGTGATAGAACCGTGCTTGCTACATGGAGATCTATG GAGTGGAAACATCAGCTCTGACAAAAATGGAGAGCCTGTCATATTGGACCCAGCATGTTATTATGGACACAATGAGGCAG AATTTGGCATGTCTTGGTGTGCTGGCTTTGGAGGATCATTTTATAATTCTTATTTTGAGGTGATGCCTAAACAGCCAGGC CTTGAGAAGAGGAGAGACCTTTATATGCTGTACCACTATTTAAATCATTATAATCTATTTGGCTCCGGTTACCGCTCATC TTCCCTGTCTATCATTGATGATTATCTAGCACTTTTAAAAGCTTAG
Protein sequence (LotjaGi3g1v0375600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMSEDPVREWILSEGKATKITRISPVGGGCINLASRYDTDTGSFFVKTNRSIGPSMFEAEALGLGAMYETRTIRVPQPY KVGPLPTGGSFIIMEFIEFGASRGDQSILGRKLAEMQKAGKSSKGFGFDVDNTIGSTPQINTWSSDWVQFYGEHRLGYQL KLALDQYGDRTIYEKVIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPG LEKRRDLYMLYHYLNHYNLFGSGYRSSSLSIIDDYLALLKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 277 | 277 | 1.4E-135 | – | |
| PANTHER | 1 | 277 | 277 | 1.4E-135 | ||
| SUPERFAMILY | 3 | 272 | 270 | 1.23E-42 | ||
| PIRSF | 3 | 280 | 278 | 2.9E-95 | ||
| Gene3D | 8 | 95 | 88 | 2.1E-14 | – | |
| Pfam | 11 | 277 | 267 | 8.6E-88 | ||
| Gene3D | 101 | 280 | 180 | 3.8E-54 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0375600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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