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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0380100 |
| Transcript ID | LotjaGi3g1v0380100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isoaspartyl peptidase/L-asparaginase; TAIR: AT4G00590.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|O65268|TASP1_ARATH Putative threonine aspartase; TrEMBL-Plants: tr|I1JMD9|I1JMD9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0380100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77263291..77265949) extracted from Lotus japonicus Gifu genome v1.2.
GAGGAGAAAAAGAGGTTTTTCGTGGCGGTTCACGTAGGCGCCGGCTACCACTCTCCTTCCAACGACAAACCTCTCAGATC CGCCATGAACCGCGCTTGCCTCGCCGCCGCCTCCGTCCTCTCCTCCGTAACCACCTCAACCATCCCATCCCTTTTCCTCT CTCTCTAGTCTCTTCCAATTCCAACATCATCTTTTGTTTCTCAGGGCTCAGGACTCTGCTTAGACGCCGTCGTAGCCGCC ATTCAAGTCTTGGAGGATGATCCGAGCACGAATGCAGGAAGAGGATCCAATTTGACAGAAAATGGCGGTGTGGAATGTGA TGCCAGTGTCATGGATGGAAAATCTGGAGCATTTGGTGCTGTTGGTGCTGCTCCAGGTACTATACAAACAGTTGAATTCA ATTTCTGTTCTGGGAAATTCTTGAGATGATGATGAAACTGTTATATTATATGTTGAAATTTTCAGTCAAGTTTGTGTGTA TTTATTCCATTAATTATAGACCAGGTGTGCCAAATGCTGTCAAAATTGCTGCATTATTGGCTAAGGAGCAAATCATGGGG TCTCAATTGTTGGGTCGAATTCCACCAATGTAATAATTACTTTACTTCTCTGCATTTGTAACCAAAGCATGTAGAGTAGA CTGTAGAGTCTTCTCTATTTTTAGCTCATATGAACAAATCATCATTGTAGTTTCTGTTGTTAGGCTTTTAGAAATTTTAT CATATTTGCAGCTTCTTGGTGGGTGAAGGGGCTCGCGAATGGGCAATGTCGAGGGATATTGCTTTGCCGGAAAGTATAGA AGAGGCCAATGAGGTCTTATTTTCTAACTATGATTTAAATTCTGCATGGGGACTTATCAGTAAGTCGTACCGCTTTGAAA TTGCAACTTTTGAGTGTATTTCATGACAGTGGCTGGTCACAGAAAAGGCAAAAGCACAATGGAGAAAGTATAAATCTATG GTTGAAGCAGCTAGATCAAAGATAGAGAACTCTTCTCCTGATGGTGATTCTTCTGTCTGTCAAAGTGCTGCAATACCTGG TATCAAATAGCAGACTTCTACAAGAGCTTAACCTTCTTTCTGTCTACAATCCCTTGTCTCTCAAGGACTAAATCCTTATA TCAAAGAAACGAAAACAATCAAAAGAATCAACTATCAAGGCAACTAAGTAACAAAGCCAAATCTGAGGGGAACAATCTTA AGGTTTTGAATGAAATTATAAGTCCCTGAAAGATGATATATTTTCAGTAAAAAAAATTAAATATGAACTTATTTACACTT TTAACTACTTCAATGTAAAGTTGACCTTATGGCATTAGTGTATTTTGCACCAAAGTATATTGTTCCTTTCATGCTTGAGT GCTTCAGTGCTTGCGCTTGCATGAACAATGTTGGCTAACAAAGGAATTAGGGTAGTTTTACACTAAGTAAAAGAAATTGA TCATTGTTGGCATCTTTTTTCTTCCAAGCCTTAAACCATTACATCTATATGACACCCCCTATGAACTTTATCATGCCAAA ATCATGCCCCCTTAAGATGCAGATTGTGCTTTGGAAGATCGCATAATGGACACAGTTGGGGTTATTTGTGTAGACAATGA GGGGCATGTAGCATCTGGGGCCTCGAGTGGTGGTATTGCTCTTAAGGTGAAGAATGGTTTCTTCGTTTGCTTTTTTTCTA GTGCTCCGCACTTGCATATTAGCATACTATCTGATTGCTCGTAATTATGTATTCGAAATATCCAACAGGTTAGTGGTCGG GTTGGGGTAGCAGCAATGTATGGTTCAGGTTGTTGGGCATCATCAAAAGGTCTCTTTGGGGCTCCGTTCATGGCTGGCTG TTGTGTTTCTGGTGCAGGAGAGCAGCTAATGAAAGGATTTGCAGCCAGGGAGTGCATTGTTTCATTGTCACTGTATGAGT GGCTCTCAGTCGTATAATTGCATTTAATTAGCTTTGCAGGCTATAGCAATACTTTGTGTGCTGGATTTTTCCTGATGTTC ATTTTCCTTCAGCTCACAGTCTGGTGCTGCCTCTGCTTGCACAAAAGTATTACGCTCTGTTACCGAAGATAGCAGTCAAT ACGGCACTGATAGCACTGCAGGGATCTTGGTTGTGCAGTCGGATTCTTCCACAAATGTGAGCCCCTTCAGCCTTTCCAGT TAATAGTTTTGTGAAAGATTATTTAATCTTTGATTTTCTCTAGGACGAAGGAAAATCATCAAGGCTGAAAGCTGTAGAGT TTTCAGCTGCTTATACTTCCTCATCTTTTGGAGTAGGATATTTTGGAAGCTCTATGGAACGGCCCAAGGTAGTGTATTCA TGACTCTGGTATTCCATCATATGAAGATTTGATAGTTGTACTATTTTGTTTGAATTTTAGCAAGACATTAAAAATGATGC TAATTATGAAATCATCACATGATGGCCCTAAAAAATTTTGCACACAGAATATTTTAGGTTTATTAAAGATGCTTTTAATT TAGCATGTTTAATTTTCAGCATCTGGTCTCTGATCTAATGATATTTCCATGTAACCTTTTGGAACGTAATGCTTTTACAT TGTCTTATATTCCAGGTTTCAATTCTCAGGAGTACAAAACAGCAAAGCAGGACTGCTATAGATCAATTTGGAGCACGGAT AGACCTTTCAAATCCATAA
CDS sequence (LotjaGi3g1v0380100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCGCGCTTGCCTCGCCGCCGCCTCCGTCCTCTCCTCCGGCTCAGGACTCTGCTTAGACGCCGTCGTAGCCGCCAT TCAAGTCTTGGAGGATGATCCGAGCACGAATGCAGGAAGAGGATCCAATTTGACAGAAAATGGCGGTGTGGAATGTGATG CCAGTGTCATGGATGGAAAATCTGGAGCATTTGGTGCTGTTGGTGCTGCTCCAGGTGTGCCAAATGCTGTCAAAATTGCT GCATTATTGGCTAAGGAGCAAATCATGGGGTCTCAATTGTTGGGTCGAATTCCACCAATCTTCTTGGTGGGTGAAGGGGC TCGCGAATGGGCAATGTCGAGGGATATTGCTTTGCCGGAAAGTATAGAAGAGGCCAATGAGTGGCTGGTCACAGAAAAGG CAAAAGCACAATGGAGAAAGTATAAATCTATGGTTGAAGCAGCTAGATCAAAGATAGAGAACTCTTCTCCTGATGGTGAT TCTTCTGTCTGTCAAAGTGCTGCAATACCTGATGCAGATTGTGCTTTGGAAGATCGCATAATGGACACAGTTGGGGTTAT TTGTGTAGACAATGAGGGGCATGTAGCATCTGGGGCCTCGAGTGGTGGTATTGCTCTTAAGGTTAGTGGTCGGGTTGGGG TAGCAGCAATGTATGGTTCAGGTTGTTGGGCATCATCAAAAGGTCTCTTTGGGGCTCCGTTCATGGCTGGCTGTTGTGTT TCTGGTGCAGGAGAGCAGCTAATGAAAGGATTTGCAGCCAGGGAGTGCATTGTTTCATTGTCACTCTCACAGTCTGGTGC TGCCTCTGCTTGCACAAAAGTATTACGCTCTGTTACCGAAGATAGCAGTCAATACGGCACTGATAGCACTGCAGGGATCT TGGTTGTGCAGTCGGATTCTTCCACAAATGACGAAGGAAAATCATCAAGGCTGAAAGCTGTAGAGTTTTCAGCTGCTTAT ACTTCCTCATCTTTTGGAGTAGGATATTTTGGAAGCTCTATGGAACGGCCCAAGGTTTCAATTCTCAGGAGTACAAAACA GCAAAGCAGGACTGCTATAGATCAATTTGGAGCACGGATAGACCTTTCAAATCCATAA
Protein sequence (LotjaGi3g1v0380100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRACLAAASVLSSGSGLCLDAVVAAIQVLEDDPSTNAGRGSNLTENGGVECDASVMDGKSGAFGAVGAAPGVPNAVKIA ALLAKEQIMGSQLLGRIPPIFLVGEGAREWAMSRDIALPESIEEANEWLVTEKAKAQWRKYKSMVEAARSKIENSSPDGD SSVCQSAAIPDADCALEDRIMDTVGVICVDNEGHVASGASSGGIALKVSGRVGVAAMYGSGCWASSKGLFGAPFMAGCCV SGAGEQLMKGFAARECIVSLSLSQSGAASACTKVLRSVTEDSSQYGTDSTAGILVVQSDSSTNDEGKSSRLKAVEFSAAY TSSSFGVGYFGSSMERPKVSILRSTKQQSRTAIDQFGARIDLSNP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 350 | 350 | 2.2E-112 | – | |
| PANTHER | 1 | 350 | 350 | 2.2E-112 | ||
| CDD | 1 | 363 | 363 | 1.81952E-104 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Pfam | 3 | 283 | 281 | 1.1E-43 | ||
| SUPERFAMILY | 4 | 339 | 336 | 2.57E-59 | ||
| Phobius | 4 | 14 | 11 | - | – | |
| Phobius | 15 | 26 | 12 | - | – | |
| Phobius | 27 | 365 | 339 | - | – | |
| Gene3D | 183 | 323 | 141 | 4.0E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Threonine-type endopeptidase activity | Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0380100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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