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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0386500 |
| Transcript ID | LotjaGi3g1v0386500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein BPS1, chloroplastic; TAIR: AT2G46080.1 BPS1-like protein; Swiss-Prot: sp|Q9LMM6|BPS1_ARATH Protein BPS1, chloroplastic; TrEMBL-Plants: tr|A0A072TPQ1|A0A072TPQ1_MEDTR Plant/F1M20-13 protein; Found in the gene: LotjaGi3g1v0386500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78218445..78226933) extracted from Lotus japonicus Gifu genome v1.2.
GGCAAGTGACTGGTTCGGCCGGCGCCACTTGATTAACGAGTAGAAAAACACGAAAAGAAAATTAAAACAGCGGTACCACT ACCATCACATAGATAACAGACCAATGATATAACCACACGTGTTTTATCACAATCGCGTTTTCTTTATCTACCACAAAAAC GAAGAACACCACTCACCTAACATTCGAACCCTTCAAAGAGACGAAACCGTTCTCATCGGCTATTCAATCTCTCTAAAACT TTTTCCCCCTCTTCTCTTCGATTCATCTATCTATCAGGTAACATCCTTTCCTCTTTGATTCGGTGTTTTCTTCCAAATAA AGTAACTCATGGTTTTTATTTCGCGAAATTATTTGGAATTGGGGTTTTGTTAATTTTTTGCATGAATTTGTTTATTAATC TGATGATCGGTGATTGTCTTTCACTTTGATTGAATTTTAGTTCGTCGATCTGAAGTTTTTGACTAGGTTTAGATGGGTTG ACTTTTTTTTGTTATGTTTTTTTATTATGAATTTTTGAGACTTGTGTTGTTGGTTATTCGATCTTTGAATTTAGCTCTTG TTGTTTAAGTTTTATAGTTCTGGATTTTTGATAATTCGCTGTTTGAATTTTACTCTTGTTGTTGAAGTTTTTTGTTTTAG ATCTGAACAGGATTATGAGAAATTGAGGGTTAGAAGGAATTATTTTTATGGATCTTGGGTTTTTATTTTCCTATTTGTGA CTTTATTTAAAGTCTATGTTGGATCTGATTCCTACAGCTGTCCATTATCTGGGTTTTGGTCCCAATAATTTTTTAAACCT TATTTTAGGGAAAATCTGGTTAGTTGGCTGCTAATTTTCAATTCCCTTGTGGGGTGTGCGCGGTTTAGTTATTTGGTGAG AACTAAACTGAACTCGATTTCGTGTTGTGAAAATAACCGAACCACCTTATAGTGGTTCTTTGGTTTGGTTAACCAGTTCT ACATGGTTCAAATTGGAAAATTTGATGGAAAATTACTGAGAACAAGTTAGGGGTATTTTGATACACTACAGTGGCATGGT AGTGAGCTGGATCTGTGATAACAACTCTTTTGATCAGGCCCCTTCACTGGTTCACTGAGATACATAGTGCTCTGCCTCAA TTTTTAGGTGGCTAATTCTGCAACTGGAAGCTAGAACGAGAAGAGTAATACACTGATGATGAAGATGGTGGCAACCATGG ATCTTGTGTCAGAGAAATGAGAAGTTAGTTTCAATGTTGATGTGATAAATGACAAGGATGACCATGGGTCTCCTTGTTAA CCTGGCTTCTAGGACACTATTGGTTCGGTTAACTATTGGTTCACTCAACCATATACTATGTAGTCAATAAGTAATGACCG TGATTGTCTGGAGTTAAATAAACTGGATTAGAGAGAACCAGTTTCAAGAAATTAAGTTATTTAAGGTTTGATTCAGTTCA ATTTGTAGTTTAGTACTTTCATTCACTTGATATGATTTTTTCGCATGACCCTAATTTGCATTGTGTGCTCTTCTGTGATT GGGAACATTGGACTTTGCCACAATTTACTATCAATCCTCTGTTTTTTAGTATAAATTGGTTTTAATGGTTCTTACAGCTT GGATAGTGAAATGGAGCAAAATGCTTTTCATAATTCTGAAAGAAACAAATATGGTGGGGGAAGTAGTAGTGTTTTGAGTG GTTAAGGGTAACTATTCAACACTGTCTTTGGTAGCATGAAATATCAGTGCAAAATAACACTTAATATTATCATATGTTAA GATTTTTCAACTCATTTACTATTTGTGTTTACAATTATGTTATATTTTCCTTGTTCCCTACTGAAACCTTATAAGTTTGA CATGTCTTATGTATTGCAGCTGCCATAATGAGCCGTCCACAGGACCCACATCCACCCCGGTCTTTCTTCCCTTTTGGAAA TCCTTTTCGGAAGATATCACCTAAAGGCTCTCGCAAGTCTCCACAACTTCTTGCAGTACTACATGCTTTTGAGGCAACAG TGGCAGAGAGGCTCAGAAAACTTATGCCCAAAAGCAAGGATGAAATCCTCAGCTTATCTTGGATGACTCTAGCTATGAAG TCACTTTGTGAAACTCATAATGACATACGAACCCTTATAATAGATCTTGAGCTGCCTGTGAGTAATTGGGATGACAAATG GATTGATCTGTACTTGGACATAAGTACAAAGTTGTTAGATATTTGCAATGCATTTAGTTCCGAGCTATCAAGGCTGAATC AAGGTAATCTTCCTCTGAAGTGTGCATTGCACAATTTGAACTCTGTCTCTTCAAAGTTGTTTGTCCGGGCCTGTTCTTTC CTTGATGATTGGAGGCAACAAGTTAATTCTAGGAACCCTAGAATTGAAAAATGCCACAGCATTTTAGATGATCTTGTGGG ATCACTTGATCTTCCTAAGGTTAAAAATTCTGCCAAAGGTCAAGTTTTGATGCAAGCCATGTATAGTGTCAAGGTGGAGA CTATATTTATTTGCAGTGTGTTTACTGCGGCATTCTCTGGCTCTTCAAAGAAGTTGTTAGATTTGGATGTGGCTGACGTT TATTCATGGGCTCCAGCTTTTATAAGTTTGCAGAACCTTGTAAATGAGGAGATTAGAGTTAGATTTTCTAGTGGGAATTT TTCTGTAATGAGTGAGTTGGAAACTGTTGATGCCGTTGTGAAGGAGTTGTATCCTACTATCCAGGGCGGTGGTGGTGATG CCATGGAGACAGAATCACTTCTGAAGACTGTTGAGGAATTAGGCGGGGCCACAGAGAAGCTTTCCCAAGGAATGGATCTT CTTTCAAAGGAAGTGGATGGATTTTTCCAAGCAGTTTTGACTAGCCGTGATACTTTGCTATCTGCTATGAGGTTTGATGA TAAGAATGTAAATGATCGTGTAGTTGGCCGTAACATAGTTAAGCAAGTAGTGCACTAAATATGTGTTAGCTTAACTGGTA GGTAATGTTAGGTTGGGAGGTTTTCAATGTTGTGTTTTTACTATTTAGTTTTATATTTCAAGTTAGTATATGTGGGAGTG GGATGTCAAACAATGAAATATATATTAAGTTTAATTTCGCCTACCGTAGTTTGTAGCCAGCTTGTATGACCTTAATCCGA ATACCGTGTGTACAGCATCTATATATATATATATACATATATACATGATGACAATGTATATAATATAGCCTGATCTTAGT CCCTAAACTAATGCTGATTAAGGATAACAAAAACTTTATTCTGTTAAAAGTGAGGACTAAACCAGATGAAAATAATTAAA ATGTGACTAATTCAAAAAAAATTGATATTTTCATGAACCAAAAACATAATTTACCTTACATTTTTTCATGGTTTTCTAGA CATTTTAGACAGTAATTGAGTTTGGAACTCTTGATGACATGAAAAGGCCTCAGCTACTGTTTTACCTTGGTGTTATATAT GTTCTCTTGGAGTTAAAGAAATGCAGGATGACGGATGTTATGGCTCAGTCTACAGAAGTAGAATTTATTGCAACAACAGT TGTAAATCAATCCTTGTGGATCAAGAAATTGTTGCTTGATTTGAAAATGGAGCAGATGGAGCACACGAAGTTCTTTGTTG ACAATTAAGCTGTTAGATCAATTTCCAACAATCCATTGTTTCATAGAAAGACCAAGCATTCAAAGATCAAGTTTTATTTT CTTAGAGAAGCTGAGAGAGGTAGGAGAACTAACTTTGGAATATTGCAGAGCTGAAGAGCAAGTGGAAGAAGTTTTCATCG AAGCATTCCCCGAAGTGAATTTTGACTTTGTAGCTAATGATTCAAGGAGTGTTGATAGTTGATACTTTGACTTGGTAGCT GTTTGCAGAAGTTCAAATTTAGATTTACTGATTTTCAGTTATTATTTAAGTTTGAATAACTCATGACGGCTGGATATTTG AAGTTTGATAGATTGTTGGTCAGTTGTCATTTTATAATTTGTTAGGTTCTATTTTCTGTTTGTAAACTTCTGATCGATCT TGTGGAGATTTTCTAGATTCCTATTTTTAGTCAATTATTCACAATTCTTCATCCAGATACGTTTTTCTCTTTGATATTGT TCATTTTCTTATAAGATACCAATGAACTGTTGCTGCTAGGTTTCCTATCGTTTAGATCATGGTAAATACACAAAACATAA AATGTAATGGTTTGTTAGTGTTCAAAATATTCTAAAATATCTCCATGTTTGCTGCTTGTGTTTTTTTATTAAGTTAGACA CATTTGTAAAGCTTTTCCTACCAAGTATTTAACATATAATTCGTTACTGCTATAATTTACCATACAATTCATTTTTGAAC TTGAACAAGGATTTTTGGGTAACAGGAGAACAATTTAACAGTTAATAAGAAGCTACAGGATACATCTTAACAAATGGCTC ATGGAAGTTTAATGCTAGAAGTACATTTCTTAAGTTCCAACATATCAATGGGAAGAGTCTCAGTGGGAAATTCACATGTT GTCGTGATTTTCTCAGGCCCCTGATCAGGCAACAAATTGCATGGCTTAGGAGTCACCCCACTTGTGATCCCTTCAACATC ACTGCAAGTCCAAGGCTGTTTCTTGGACTTGGCTGCCATACTAATTGTCACATTGGCAATGCAGATTCCAGTAAACTGGT CATTAGAAATTCCTTCCAAGTTTCCAGCCATGGTCACTTCATCTGCTACCATGTCTCTGTAGTTGATGCCTTTGATCTCA GGCAAGGCATTAGGATCATAGTTCTTATCAGCATGGGAGCCATAGTTCCCAGTCATCCAAAATGCCCATTTCATTGTGTG CATGGTCATTCTCTGGACATATATGTCCTTCACATACCCTCCTCTTCCTACTGCTGTCTTGATTCTGATGCCTGATTCTG TGTGGATGGCTGTGATGTCCTCTGCTCTGACATCTTGGATCCCACCTGACATCTCACTTCCCAAGGCAATGGTTGCACTG TATGGGGAAATGCATGTCAGCCTTCTGATTACTAGTTGTTTTGTGGGCCATCCAAATTTTATGCCATATTCATCCCACCC ACTCTTCACTGCCACACAGTCATCCCCAGAAACTATGTAGCAGTCTTCAATTCTGGTATTTGTACAAGAATCTAATGCCA GAGAAAAAACAGACAAAAATGGTACTCCACTCAATACCAAGATATACACAAGTAATGGATTTAGCTCTTCAGGACTAAAA GAGTCATTTTACATGATAAAGTAAATCATCATAGTAGTAAATTGAGAGACAAAATGTTGAAATTTAAAAGACACAACATA ATGCATGTTTAGAAATCTTTCTACAATTGATTCTGAAGTCGGAATCAATTCTAGAGTTATGTGAATATGTTATGAGTCTT AGAATTCATTCCGATGAAGAAAAAATTGATCCAAACATACTAATAGTTTATTAAACACTTGCAAGTATATAAGTATAATT TAATTAACAACTGTGATAACTTAGTTTACTCTCTCTAACATACTGACCTGGGTTGATGCCATCAGTGTTAGGGGATGTGA CAGGAGCGATAATGGTTATGCCTTTAATTATAATATTGCTGCATAACGTTAGAAGATTTGTTATAACCTTGACATTGGAG GTGAATTTCATAGCGTTAAAAATATAGTGTCACAAAGGTCAAATGTGATTTTGAAGGCTTTTAAATTAAAACTTGATCAC AACATGAAAGGGTAGGATTTACCTGCTATAAACAGGATGGACATTCCATGATGGGGAATTCAGAAGCGTTAGATTGGAGA TCTGAATGCTGTCTGAGAACATCAACTCAATCAGGTACGGGCGAGTGTACTTCAACTTTTTCTTGTGAAATTTCTGCCAC CAAAATGCTCCCTGACCATCTATGGTGCCATTATCCCCTGTTATCACCATGGTCATAATTTCATAAAATGTGATTTTTTT TTTGAATTCAATGTGAATTTAATCATAAAGTTAAATTAAATTAAAATTAAGTCAAACATAAGATTAGATACAAAATATAT TCAATGAGGTTAGTAAATTTTGGGAATTGGAATTCAAACTGTCTATGTGTATCACATGTTTGCTGAAAAGGTGAAACTGT TTCACCAACCCTTAACTACTTGTTTGATAATTGTTTCATACAAGTGCAACTTTTTCCTTTTCCATACCTGTGACAATAAC ATCAGTGAGGTTTGTTCCAAATATGAGGCTAGTATATCTTCCTGCTGCTGCGTCTCTTCCTCTACCGTAGGATGGGAGTG GTTCAATCACAGGCCACTCACTAATATTCTAAACCAATTCAAAGAGAAACTCTAATTAGTTTGGAAATTCGTTTAAAGAT CACAATGAAGTCAAAATCATTATAGACAAGCAAAGTTTAAGAGAAGTTACTTATGTACAGTGTCCACTGTGATTTTAACT TCACAGTGTTATTATTCAAACACGTTTTGAAACATGTACTTAGTAAGGTTACACATGAAAGTGCGAAAATTGTGTCAAAC TTGAAACTGTAAGCAAAAGAAAACAGTGCATTGGACCTCACCATGGCACTGGCAGAAAAAAAAAACTAGGTTCATTTTCC TATGGAACCCAATTTGTCATCTACTGTGTCTATAAACAGTTTTTAGGGGTTCAAAGGTTCAGAAGATGTTAAGTTCCTTT CATGAGTTACTTAACAAAATTGCTTTGATAACCTAGTTTACTAGTAGCAGTAAGAAGTGATGAACCTTGTGACAAATTTG TATTGCATTTATTGGACAAGTTACCTCATTTGTGACTCAAGTTAATCTCTTTAAAAACTTATATTTCCACTTTCATAAAT GAGCCATGAGTCTGTGGTAGCGATAGTACTTAGCTTCTATTTCAGCTTGTAATGGCATTCTTAAGCAATTGTGGATAGAG TACTTAACAAAGAAAATGTCATCAATTTTTCGTCAAGAAAGTCCAAAATACCCATTTTATGTTTTCTACCATGCAACTAA TGAAAGCTTGGAACATCACTTCCTAACTTAATTTATTGCTTGTTTTGTTTGTAGATCTAGCCAAATGCTGCCAAGAGGAA AGATGCCAGAAAAGCCAGATAAGGCCAACTAGGTGGAACAACATTAGTTCAAACACTACAATCATTAAGATAACTTTTTT CCACTTTCTTCAAAGGCTATGGATGAGCAATAACGTAACTTTTGAAATTAAAGGGTAGATAGTTATACAAGGAGTGAAGA AAATTGTGGAAGATTTTAAGTTTATAGTTCATAAAATGCAAAACATGTAACTATGTAAGGATGGGAAGATATGTAAGGAA AAAAATAGATTCTGCGTGAGGACATAAAACAAGTGAGCTGACATTTGTGGTTGCTTATAGCATGTTTGGATCAACTTCTC TTTACTCAATCAGTTCTAGCAGCTAGAAACAACTCAAAAAAGATTTCTCCACAGAATAAATTTTGGCTTTAGAATCGATT GTAAGGATTTTCAGACAAGGTTTAATCATCAATCTCAATTCTGAATTAACAAAACAAATATAATGGATTTTAACCAGGTA TTGAATCTTATTCTGATATTACTTATTCATCAAACATGGAACAAAAATGAGATACCTGAGAAGCAAGGAGAACAGCATCT TTGTTGAGGTAAAGTGTGAAGTGGCTGGTAAGACTGAAGCTCCCAGTAAGCCATTTCCCAGCAGGAACATACAACTGAGC CCCTCCTTTAGAAGCATACTGACTCAGGTGACTGATTGCAGATTGAAAGGCCTTTGTATTAGATGTCTTTCCATCCCCAA TACCACCAAAATCTGTCAATGAAGCACTATGTGCTCTGCAGTTTATAGCACTGTACACAAATGATGTGGTGACTGTTTTG GATTTTCTGCTCTCAGCTACATCTGAACTCAGCAGAATCACCAAAAGGAGAGCATAAACCAATCTAATCACCTGAAAAAT GTAAACACACATGAGGGAAAAAGAAATGGTAGAAAATGAAGGTATAGGTGGCTCTACAATCTTGCTGAGGAATTTTTCTG TATAGCTCTATGAGTATATGCAGGAAAAATTGCATCTATAAGACCAGATAAAGTGTAATAAGTTCTCTTTAATTTGCATC CAAACAGGTTCTTAGATTAGATAGAATGCAGGGGAGGGAAGAGGGTCTCACTTGTACCCTCATGTGAGCTTTCCACAAGA GCTTCATGCTAAGAAAATGCACTTTGGTATTTGTTTGAGGTGTATGTGGAGACTGAAGCTATGTCAAGTATTTATAGGGG ATGTTGGGGATTGTTTGTCCAAATAAGCAATGAAAATGATTATTTCATCTCTCTATATATCATAAAATTGGTATAGTACT TTAAATCGCCAATTTAGGGGGAAAATGTATATTAAAATACTCTTTTTATGTCATTCTTACTCAAAATAAATGAGTTCAAG ATTGCTCTTGTTTCCCTAAGAACCATGATATGCTAATAGAATATAGTATATTTGTTGTGTGCAAGTATTAAATCTTATCT CCAATTTCG
CDS sequence (LotjaGi3g1v0386500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCCGTCCACAGGACCCACATCCACCCCGGTCTTTCTTCCCTTTTGGAAATCCTTTTCGGAAGATATCACCTAAAGG CTCTCGCAAGTCTCCACAACTTCTTGCAGTACTACATGCTTTTGAGGCAACAGTGGCAGAGAGGCTCAGAAAACTTATGC CCAAAAGCAAGGATGAAATCCTCAGCTTATCTTGGATGACTCTAGCTATGAAGTCACTTTGTGAAACTCATAATGACATA CGAACCCTTATAATAGATCTTGAGCTGCCTGTGAGTAATTGGGATGACAAATGGATTGATCTGTACTTGGACATAAGTAC AAAGTTGTTAGATATTTGCAATGCATTTAGTTCCGAGCTATCAAGGCTGAATCAAGGTAATCTTCCTCTGAAGTGTGCAT TGCACAATTTGAACTCTGTCTCTTCAAAGTTGTTTGTCCGGGCCTGTTCTTTCCTTGATGATTGGAGGCAACAAGTTAAT TCTAGGAACCCTAGAATTGAAAAATGCCACAGCATTTTAGATGATCTTGTGGGATCACTTGATCTTCCTAAGGTTAAAAA TTCTGCCAAAGGTCAAGTTTTGATGCAAGCCATGTATAGTGTCAAGGTGGAGACTATATTTATTTGCAGTGTGTTTACTG CGGCATTCTCTGGCTCTTCAAAGAAGTTGTTAGATTTGGATGTGGCTGACGTTTATTCATGGGCTCCAGCTTTTATAAGT TTGCAGAACCTTGTAAATGAGGAGATTAGAGTTAGATTTTCTAGTGGGAATTTTTCTGTAATGAGTGAGTTGGAAACTGT TGATGCCGTTGTGAAGGAGTTGTATCCTACTATCCAGGGCGGTGGTGGTGATGCCATGGAGACAGAATCACTTCTGAAGA CTGTTGAGGAATTAGGCGGGGCCACAGAGAAGCTTTCCCAAGGAATGGATCTTCTTTCAAAGGAAGTGGATGGATTTTTC CAAGCAGTTTTGACTAGCCGTGATACTTTGCTATCTGCTATGAGGTTTGATGATAAGAATGTAAATGATCGTGTAGTTGG CCGTAACATAGTTAAGCAAGTAGTGCACTAA
Protein sequence (LotjaGi3g1v0386500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRPQDPHPPRSFFPFGNPFRKISPKGSRKSPQLLAVLHAFEATVAERLRKLMPKSKDEILSLSWMTLAMKSLCETHNDI RTLIIDLELPVSNWDDKWIDLYLDISTKLLDICNAFSSELSRLNQGNLPLKCALHNLNSVSSKLFVRACSFLDDWRQQVN SRNPRIEKCHSILDDLVGSLDLPKVKNSAKGQVLMQAMYSVKVETIFICSVFTAAFSGSSKKLLDLDVADVYSWAPAFIS LQNLVNEEIRVRFSSGNFSVMSELETVDAVVKELYPTIQGGGGDAMETESLLKTVEELGGATEKLSQGMDLLSKEVDGFF QAVLTSRDTLLSAMRFDDKNVNDRVVGRNIVKQVVH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 347 | 347 | 8.7E-195 | – | |
| PANTHER | 1 | 347 | 347 | 8.7E-195 | – | |
| Pfam | 36 | 128 | 93 | 3.9E-8 | ||
| Pfam | 174 | 332 | 159 | 8.7E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0386500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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