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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0390100 |
| Transcript ID | LotjaGi3g1v0390100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Intracellular protein transporter USO1-like protein, putative; TAIR: AT5G41620.2 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A0R0FVK0|A0A0R0FVK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0390100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78808029..78812184) extracted from Lotus japonicus Gifu genome v1.2.
CTAATATCTTGGGAACACAAAACTGAGGTAACTTGTTCATAGAACTTGTCACAGAGACATTGTCCCTTGTCATGTCTCAA AAAAGAAAGAAATAAAAGAACCATTTCAATCAACTCAATTTCTTAAAAATAAATCAAAATTGAAAAATTGAAACATTGAA TTGTAAGATAGATAGAGAGGTGAAAGAGGAGACAACAGAAAGAGAGAACAAATGGCAGAAAACTGGAAGCAGCAATGGGC GATGGTGGTGGGGAAAAGGGAAGAAGGACCTTCTACTCCACCACCAACATGGAGACTTGAGCAGAATGGTAGTGGTGACA GCAAAAACCCGGTTCAAGAGTTCCTCAATGTTCCCATTTCTACAGTTTCTGCAAGGAAGCTCTGTGCTAACCTCTGGGAA ATTCAGCCCCACCACCAACAAACCCCACTTGCCAAAATGAACAAAACCGGCACCACACTCCGCCGCCGGCGCCGCCGTAG GGACAGAGTGGCTGAGCCTTCTTCCAACACCCCTTCTGACAAGGTGTTGTCTGCTTTCCTCACATGAACTGTTTGTTTTG CACTGTTAAGCTCTACCTGCTTTTTTTTCCTTTTTTGGAAACTCATTGTTTTTGGTTCTCTGCTAGTTCAGTAGAAGTGC CTGTACTCTAGGAATTTCTCCCCTTGTCTTCTGTTTCTTGTTGGCTTTTCTTTCACCATTTCTTTCAGTCTAACAGGATT TTGCTCCTTTGGGATCTGATTTGGTGGGTAGGGTACCCATTTGTTCCACTTAGTTCAACCATACACATATAACCTTAAAC TCTATCTGTGACTCATGTTAAATTTCTCCCCATCTTTTTGCTTTATTCCTTTATTATGCCATACAAGTGAAAATTTCAGT TTCAGTTTAGAAGTTTGCAATTGATTTGGTTTGTGTATATTACTTAAGCAAGTGGTTTAGATGTGTGGAAAAATATTATG GGTTAACATATGCTTTATTTCAATTCTTAAACCTGGAAGCTACTCACAGAAATTTCTCCCCACAATTGATTATAGCTCCA GAATCAAATGCAGAAGGGTTTTCAAATATGCATTTCATTTTCCCCTTAGCTGGTTTTCATTTTTCATCCTTGTTGCTTGT TTTCTTCACTTTGCCTTGCATTTTTATTGCCTGATGAAACTAATGTAAGTCTGCTTTGATGTTTTAGTTCCTTTCAAGTT TCTGGTAGATGATTGATTCTGTATAGCTCCCCATTCTTAAACAGCTTACTTCTCATTAGAGGCATCCAAGCATATTTTTT CCTACAATTTTTCTGTTGGTAAACCTTTCTTCCCATAGTTTGTTAACCCACATTGTCTTTTGTATGCAACTTCTAAGTGA GGCAAGAAGCCAAGCATAGGTACCTAACTGGCTAGGAGTCTCTTATGTGGAGAGGTGATTTATTGTTCATTTATTGCATT TGTGTGTTGTTTTTATTTAGCTAGATTATGATGAGTTGAATTGCTTTCACTGACATAGTGAGATCCTTTCAACTCCTTCA ACTGCTTCTCTTTACTTTGGTCTTTGGCTTGCATCAATGCAGCTGAATAAGTTAGAAGATAGAGATTTTTGAATGCTCAA TTCCTGAAGTTGAAATTTTGTTGTCAGCATTTTGGGTACTATTGTTGCATGTAGAAATATCTGTATAGTGTCTTCTTTTT TAATTAGATTTTAATATATATTTTCTATTGAAATGCTGACTGTTGCCCGGTTCCTTATTGCAGCCAGCATCTGCTAGTAG TGTGAGAAGACATGTTGCTGCATCACTTGTTCAGCACCATAGATCAGTTGAGAGCAATGGCAGTGCTCAACAGCCTGTAT CACCCACTTGTTCCAGCAGTTCAGTGGAAGTAAGCATAAATTTGTCCATTTGAATCTTGTCTATATGAGTCTTATGCAGT TTTATGTTTCATTCACTGATTTTATGGGTTTAGAGTTTAGGTGATGGACTTCTATTTAGATAATCAGTTTTTTTCGAAAA CGAAATAGACACACACACACACACACACACACACACACACATAATATATATTTAAGTTGAGAAACAACCCCTCTCAACAT GGGTACAGTAACAAGCCAACAAAAAGCTGGCAAAAGCTTAGTCGCTACAGCCAAACCCTCCCAAAGGCCTCTAAAGAAAA CCCCCCCACAAGATGCTTTAAAGCCAAACCAGAACCCCTGCGTCTGCATAACTGGGAAAGACCCCCATTTGTAGTAAAAA AAACAGAGACAAGAATAAATCCTACCAAACTGCACGACACAGAAAACCAGCAAACAGGTAGATAGTTGAATGACTATCTT AGTCTTAACTATAATCCCTGTTTTGTTTGCAATGAGACATAGAGCCTGTTTGGGTACGGACTTATTGGACCTTATCTACT AGAAAATGGACTAAATAAGCTTCAATAAGTGTTTTTTGCTTTGCATCCAAACAGGCAAATAGTTGAATGACCGACTGTTT CTTAATTTAGATTGAGACATTGAAAAACTGACTGTCATGAATCTTGAATCTTGATGCATTGATTCTCTTCAATGATCCTT CTGTAATAATTTTAATACATCTCCTACAAACTTATTGTAGACCAGAGAATTTTCTAAATGTATTTTTGAAGTCCTTTGAA GCTGTCAGAGTCATGCATATGCTATTTGCTGCAAACAGGTGGCACCATATAAATCTGCAGTAACTCCCACAAGTTCCTTA GACTTCAAAGGCATGGTTGGCGAGTCTAGTTACGGTCTTACAACATCCACAGAGTTACTTAAGACACTCAACCGTATCTG GAGTCTTGAAGAACAGCACGCATCAAATATATCACTAGTGAAAGCCTTAAAAACTGAACTATATCACTCTCAGACTCAGA TTAAGGAGTTACTAAGTGAGAAGCAAATGAATAGGAAGGAAATAGAGAACTTGATGAAGCACATGACAGTGGACAGACTT GTTAGGAAGAGCAAAGAACATGACAGAATTAAAGCTGCAGTTCAACCAATCAAGGAAGAGCTAGAAGATGAAAGGATGTT ACGAGAGCATTCTGAAAGTTTGCATCGGAAGCTGGCCAGGGAGCTTTCTGAAGTAAAGTCTTCGTTCTCCGGCTGTCGGA GAAATCTAGTAAGAGAGAGGAAAGCACGAATCCTTTTGGAAAATTTGTGCGATGAGTTCGCCAAAGGAATCAGAGATTAC GAGCAAGAGGTACACTCTCTTAGGCGGAATTCGGAGAAGGGTCAGGTTAAAGGCAACAATAGCCTTGATAGGCTGATACT TCATATTTCAGAAGCTTGGCTTGATGAGCGCATGCAAATGAAGCTAGCCGAATCCGGCAGCGATCTCGTAGATAGAACGT CAATTGTTGACAAGTTAGGCTTCGATATTGAAACATTTCTTCATGCGAGAAAATCTGTTGATTTGAAAAAATATGGTTAC TCCTCCCCGAAGGAGCTCAAGGAAATTTACCCTTGTCAGCATTCACTGGAATCCTTTCCACTACATGAGGTTGGAAGTGC ACCCCAGAATTTGGCTCAGGAAGATTCCATTGACAGCAGGACTTTGTTAAAGGAAGAGGCCAAACAAGATCCAAAGGAAA GTGATAGTGCCAGACCAAACCAGATTGGAAACAGTTCCTTGTTGTCATCAGAAGGTGATAAGATTTATCCTGAGAGTATT TGCAGGGAAGATTCTTGTGTCCAGTCTGCAGTTACAGCTAATGGTGGTCATGTGAAAGTGTGGAAATTGAAGTTGAGTGC TTCAGATTTTGACAACTCTGAGTCTCCTACCAAATTGCCTAAGGGAGTAAAGGAAAACACATTGATGGCAAAACTGCTAG AAGCAAGATTAGAGGGACAGAGAAATCGCTCTAGAGCTGGCAAAAGCACTTCCTAATATGAGTAGAGAAGTATCACATGG AAAAATTGGAATGTGAAATAGTTGCTATGGGTAATTGGGTATGACCGAGGGATCTCTCATCAAATTCCTGTAACCATGTT GTATCATATATGCAAGAATCATTAAGTTATTCAAAGTTGAGAAATGCTAGCAACACACTTTCACACTTCATGTGGTTGGT TTTTTTTTAAAGAGAAAAATGATGATGCACCTGGACTGGGCGAGCCCCTAGAGGGGCAACGCCCAGCATGTATCCC
CDS sequence (LotjaGi3g1v0390100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGCGAGTCTAGTTACGGTCTTACAACATCCACAGAGTTACTTAAGACACTCAACCGTATCTGGAGTCTTGAAGA ACAGCACGCATCAAATATATCACTAGTGAAAGCCTTAAAAACTGAACTATATCACTCTCAGACTCAGATTAAGGAGTTAC TAAGTGAGAAGCAAATGAATAGGAAGGAAATAGAGAACTTGATGAAGCACATGACAGTGGACAGACTTGTTAGGAAGAGC AAAGAACATGACAGAATTAAAGCTGCAGTTCAACCAATCAAGGAAGAGCTAGAAGATGAAAGGATGTTACGAGAGCATTC TGAAAGTTTGCATCGGAAGCTGGCCAGGGAGCTTTCTGAAGTAAAGTCTTCGTTCTCCGGCTGTCGGAGAAATCTAGTAA GAGAGAGGAAAGCACGAATCCTTTTGGAAAATTTGTGCGATGAGTTCGCCAAAGGAATCAGAGATTACGAGCAAGAGGTA CACTCTCTTAGGCGGAATTCGGAGAAGGGTCAGGTTAAAGGCAACAATAGCCTTGATAGGCTGATACTTCATATTTCAGA AGCTTGGCTTGATGAGCGCATGCAAATGAAGCTAGCCGAATCCGGCAGCGATCTCGTAGATAGAACGTCAATTGTTGACA AGTTAGGCTTCGATATTGAAACATTTCTTCATGCGAGAAAATCTGTTGATTTGAAAAAATATGGTTACTCCTCCCCGAAG GAGCTCAAGGAAATTTACCCTTGTCAGCATTCACTGGAATCCTTTCCACTACATGAGGTTGGAAGTGCACCCCAGAATTT GGCTCAGGAAGATTCCATTGACAGCAGGACTTTGTTAAAGGAAGAGGCCAAACAAGATCCAAAGGAAAGTGATAGTGCCA GACCAAACCAGATTGGAAACAGTTCCTTGTTGTCATCAGAAGGTGATAAGATTTATCCTGAGAGTATTTGCAGGGAAGAT TCTTGTGTCCAGTCTGCAGTTACAGCTAATGGTGGTCATGTGAAAGTGTGGAAATTGAAGTTGAGTGCTTCAGATTTTGA CAACTCTGAGTCTCCTACCAAATTGCCTAAGGGAGTAAAGGAAAACACATTGATGGCAAAACTGCTAGAAGCAAGATTAG AGGGACAGAGAAATCGCTCTAGAGCTGGCAAAAGCACTTCCTAA
Protein sequence (LotjaGi3g1v0390100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGESSYGLTTSTELLKTLNRIWSLEEQHASNISLVKALKTELYHSQTQIKELLSEKQMNRKEIENLMKHMTVDRLVRKS KEHDRIKAAVQPIKEELEDERMLREHSESLHRKLARELSEVKSSFSGCRRNLVRERKARILLENLCDEFAKGIRDYEQEV HSLRRNSEKGQVKGNNSLDRLILHISEAWLDERMQMKLAESGSDLVDRTSIVDKLGFDIETFLHARKSVDLKKYGYSSPK ELKEIYPCQHSLESFPLHEVGSAPQNLAQEDSIDSRTLLKEEAKQDPKESDSARPNQIGNSSLLSSEGDKIYPESICRED SCVQSAVTANGGHVKVWKLKLSASDFDNSESPTKLPKGVKENTLMAKLLEARLEGQRNRSRAGKSTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 285 | 284 | 8.2E-159 | – | |
| PANTHER | 2 | 285 | 284 | 8.2E-159 | ||
| Coils | 50 | 70 | 21 | - | – | |
| Coils | 146 | 173 | 28 | - | – | |
| MobiDBLite | 281 | 307 | 27 | - | – | |
| PANTHER | 282 | 385 | 104 | 8.2E-159 | – | |
| PANTHER | 282 | 385 | 104 | 8.2E-159 | ||
| MobiDBLite | 292 | 307 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0390100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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