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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0391400 |
| Transcript ID | LotjaGi3g1v0391400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome b561 and DOMON domain-containing protein; TAIR: AT3G07570.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein; Swiss-Prot: sp|Q0WRW8|B561K_ARATH Cytochrome b561 and DOMON domain-containing protein At3g07570; TrEMBL-Plants: tr|A0A072TND1|A0A072TND1_MEDTR Dopamine beta-monooxygenase; Found in the gene: LotjaGi3g1v0391400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78956788..78957458) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGCATCTGTACTACTACTCTTCACAATTACTTGTCTTAGTTTATTCTCCCATGCAAAGCCAGAAGCTGACTCATG TACCTGCAATTTAAACCTCAAAGCTCCTATCCCTTTTGATACCTCCAACCTTCACTGCCTTCCGGTATGGAATGCTCAAG GTTTCATCCTCAGGGTATGTGCACTCTTTTATAATTTAATCAAATATATCTTTATTTCAATTGCATCATATATACTAATT CTTATACCTATTATTTGCAGTATGCTCAGACTTCTGCAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCT TACATAGCTATGGGGTTCTCGGCCAGCGGTGGCATGGTGGGTTCAAGTGCAATTGTGGGGTGGGTGGCATCTAGGGGAGG CAGTGGAGGGATAAAGCAGTATTATCTAGGTGGCCTTACACCAAACCAGGTAGTGCCTGATAAAGGCAATCTACAGGTTA CAGCCAATTCAACCTTCATCAGTTTACAGTCCTCTCGTCTGTACATGGTGTTTCAGTTAGAAGCTACCGAACCTTTGTCC TGGCTAATATTTGCCACTGGATCCACCGGTATATTCCCTGCAGCACCAAGTTATGCACTAACGAAACACCTAGACAAGGT GTCCACAAGAATAGACTACTCTAAAGGTTAG
CDS sequence (LotjaGi3g1v0391400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCATCTGTACTACTACTCTTCACAATTACTTGTCTTAGTTTATTCTCCCATGCAAAGCCAGAAGCTGACTCATG TACCTGCAATTTAAACCTCAAAGCTCCTATCCCTTTTGATACCTCCAACCTTCACTGCCTTCCGGTATGGAATGCTCAAG GTTTCATCCTCAGGTATGCTCAGACTTCTGCAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCTTACATA GCTATGGGGTTCTCGGCCAGCGGTGGCATGGTGGGTTCAAGTGCAATTGTGGGGTGGGTGGCATCTAGGGGAGGCAGTGG AGGGATAAAGCAGTATTATCTAGGTGGCCTTACACCAAACCAGGTAGTGCCTGATAAAGGCAATCTACAGGTTACAGCCA ATTCAACCTTCATCAGTTTACAGTCCTCTCGTCTGTACATGGTGTTTCAGTTAGAAGCTACCGAACCTTTGTCCTGGCTA ATATTTGCCACTGGATCCACCGGTATATTCCCTGCAGCACCAAGTTATGCACTAACGAAACACCTAGACAAGGTGTCCAC AAGAATAGACTACTCTAAAGGTTAG
Protein sequence (LotjaGi3g1v0391400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKASVLLLFTITCLSLFSHAKPEADSCTCNLNLKAPIPFDTSNLHCLPVWNAQGFILRYAQTSANIWSFILSTPDTNSYI AMGFSASGGMVGSSAIVGWVASRGGSGGIKQYYLGGLTPNQVVPDKGNLQVTANSTFISLQSSRLYMVFQLEATEPLSWL IFATGSTGIFPAAPSYALTKHLDKVSTRIDYSKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| PANTHER | 8 | 193 | 186 | 8.0E-72 | – | |
| PANTHER | 8 | 193 | 186 | 8.0E-72 | – | |
| Phobius | 17 | 20 | 4 | - | – | |
| Phobius | 21 | 194 | 174 | - | – | |
| CDD | 45 | 146 | 102 | 3.2361E-16 | – | |
| ProSiteProfiles | 53 | 165 | 113 | 14.704 | ||
| SMART | 79 | 165 | 87 | 8.0E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0391400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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