Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0392800 |
| Transcript ID | LotjaGi3g1v0392800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT2G46370.4 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q9SKE2|JAR1_ARATH Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|A0A151SMT0|A0A151SMT0_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.5; Found in the gene: LotjaGi3g1v0392800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79189111..79194427) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAGGTTAGTTTAGTTCTCAATTAATGAAAGTACAGAAAAAAGTGTTATGAGGAAATAAAACACTGCAGGATTGATT GGATTTTTCACCTTACACAATCACTCTGGTAAATTCCGTCCAAAATTCATGCACAATGATGGATGCATATTTGAGAGCTG AGAGAGTTTTTGTTTTATTCTTTCAGAGCCGAAACTGAAATTGATGATGATGCTACCTTGGGCCTTGGCCCTATATATTG CATCTCTCAACGTGAATCTTGACCTCACTCACCACCACTCAGAACTGACCATCTGCATCTTCAGTTGCTCTTGTCTTGTT CCAAACAAAGTAAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCAGATCCATTACTCTCTCTCTCTTTC TTCATTTGTTTCTGTTTCTGTTTTCTCTGACCCTTTTCTCTGTCTGTCCCCCTCAGTACTGTAGTCTATAACACACAACA CAAAAGATAAGATTGTCCTAGGTTGGTGTTATTCATTTACAACTATTTCACTCACCCCACAAGAAGAAAGAAAGAAAAAG AGAAGACTTTACTTTCCATTTCCTTCTTTTTTTCCTCTGTTTTTCTTTTCTTTTACTTGTTTACTTTCATTGGTTTCTGG GTTTTTCAACTTGTTGTGGTTCCAGAATACCCAGATGAATCAAACAGGATATGCAGCTATTGTTGACTTTTTTTTCTCTC TCTTTTTATTTGAATATTTGATAAGCTTTTTGAATTTGATTCTGGTTCTAGTTCTGGTTAGTTTCTCTGCAAAATCTATT TCAAAAAACTAATTTTTATTCATGAATCTATTTCAAAAACTTGGCTTTATGAGCACCCTTTTGTGGACTCTCTAGTCCTT TTACTCTTCAAAGACTACTTTTGGTCCCCTTTGACTTTTTTTTTTCTTTGGCTTTTTCTCTTCTTACAGTACTTTGGTCA CTCAAAGTTACAATTTCTATTGAGTTCTGGAGATTTCTCTGGTTTGCTTTTCTGTTAACTTGATTTGATTGATGAAGAAT TTTTCATTTTGATGCTTGACACAGATATTGTCTCAAAAAAACTTGGTTGACTTGCTTGGATAAGGGGGAATTCAAGCAAA AGCCAAATATCAAATCTCAGAATTTTCTTTGTGATTTCTGTTCTTGTTTCTGTTTCTGTCTTTCATTTTCCCCCTGTTTT ATTTTACAATTTTCCCTCTGTTTTGGTCTTTTGAATGGTTCATAGAACCTGTAGAACGTGTATTTGTCCAGTTTTTTGGC ATTGTTTTGGAAATTTATTCCTCTGGGGCCGGTGACTAGGAAAACAAACAAGGAAGATCAAAACAGCAAAAGAAAAAAAA AAGGAAACATTATATTAAAAAAAATTGTGATTGGATGGGGTGGTTTGGCTTTATACATATTTTGTTTTGTGTCAATGATA TCTTCAATAGTGTTTGTCTTTTTCAGAAATATATTTCTTTATCTATATTGATTATTTTGTTCCCCCAGTTTACTTTCACC GCCTTAGACTACTAGCATTTATGGAGGTACCAAAAATAATAATAAATCATACAATAATAATAATGAGAACTCCAAACTCA ATATAATTGGATGGTCCTTGACTCCTTTTTCTTTTTTTTCTGCAGTAGCTGAATGGCTGTGAAGAAGATGTTGGAGAAAG TGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAAGGATGCTGAGGGGGTTCAGAGGGAAACT TTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGGGACTTAATGGAAGAACTGACCCTGAGAG TTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATCAACAGAATGATTGATGGAGATGCTTCTC CAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGGTCTGAGCATTTTTGACTTTATATTTTCGTGCACGTTTGG ATGCACAGTGATAAATCACAGTAGACAGAAGTAGAAGCGATAACTTCTCTTAGCTTTTGCGACTGTCCACCATGATTTTG ACAACTGTATCCAAACATGTAATTCTTCTTTTTCTTTTAAGCAGTTTTTTTTGTCTCAATTCTTTTAAGCAGTTGAATGT GCTGTTCAAGAATTTCTTAGTCTGAAAAATTGGTAATCTTGCAGTTCTGGCACTACTTCTGGGAAGCAAAAATATGTACC ATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCCATAGGAACAGGTATCCAACTTCAT GTCATGTACTTTAGTTTCTCTTTTGTTGTAAGATATGACCAAAATCGTACTTATAAAAGGCAGAGCAACCCTCACCCCTA AACTACATGTTGGGTAAAGTTATGCCCGCCTAACCCAATTTCTATGATCTTTCCACAAACCTTTCATGCAAGATTGAATT AGGAAGTAACACAGTTCCATTATTCTGCAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAGCAAGC ATTTCAAAACAAAAGGGGGTGTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTTCAATG AAGGCGCTTAAGTCCTCGTGTTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGTCACCT CTTGTGTGGCCTAATTTTCCGCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATTCAGAA CCTTTGAGCAAGTTTGGGAAGAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCTCGATT CGAACCGCTATGTCTAAACTGCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTGAGCAA CTGGTATGGATTGATACCAGAGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCCTTATT TGAAAAAGCTGAGGCACTATGCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAGCAACC AATGTGAACCCAAGAGTGCCTCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCA GAGTGAGTTGGAGGAAACCAAGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGTGAAAA TTGGTGAGGAGTATGAGATTGTTATCACCAATCCTGCAGGTATCAGATTCTCCTCTAATTTTTTCTTTTTCTCTTGTCTT GTTCTGATTAATGCATAAGGACTAATAACCACCAACCATTGCTTTCTTTTCTGCACAATGTTACATTTTGGTGCTGGCAT AATACTTCCCAGAAAATCATTAATTATTTGACCAGTTAATTCTTGTTTGTTTTTCCCCTCTTCCCAAAGTATAGTATAGT GGTTAATTTAAATTGGTAAATGTTGTTTTGAGATTTTTGCTATGCAGGATTTCCGAAGTGTTTAGGATGAACTAAGAACA ATTTCAGAATATTATTCTGAGTATTATATTTTGGAAGGGAAGAATGCTGACTGGTTAGTCCATGTTGAGGAAAAAAATGC CAAACCTAGTGCTATAAAGCTCCCGTTATCTGCGAGATTCAGGAAGGAGCCGGATCTATTTTGTGAATCTAATGTAGGCA GTCTTACCTTGCATTTTTGCAAGAGGCTGATTCACGTGTTAGTCGGTCCATGTTAGGAATGTAATAAAAAATTGAGGTAA ATTATTGGCTAATTGAGAAGATGATTCATTGGGGGGGGGGGACTTATCTTTCTGAGAAAGCTTTAAGCCAAAATGCTTAT ATAAAACCAATGCTTACCAGGTAAGGGTTGCTTTAGCTATTTAACTTTTTATTATTTTTGTGGGTTTTGGCCTTTGGGGG GGGGGGGGGGGGGGGGGGAGGGGCAGGGAAGCGGTTGCTTTGTCTTTGTTTATGATTTGTGATATGACCTTCACGGGACC AACTGAAAGTAATTTTTTCCTACTGGTTTCTAAAGGACCATAGTACATACCTAATCACATTAATGTAATATTGTGGACCT GTTTCTTGAAACTCACTGTACCTTAACTTGTCTGCATGTTCATTTTACCTAATAATGACAGTCTGTCTAATCATATTTTT ACATGCAATTAGTAATGCTGAGTATGTTTATTCCTTTTAACTTCAATGAGTAAGATTCATCCTAGTTTGTACATGTAATT AATCTTATCATTTGGCTAATTTTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCCATAAC TCATCTCCAAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAATGATTT ACAATTAGCTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGTTGATG TGTCGAAAGAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAATGCTGC AATTGCTTGGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAGCTCCG AGTTGTTAGACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAAGACTC CAAGGTGTATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTGTTGCT TTCAATTGATATATAAAATGTGGGATCTGCTTTTCTTCCATTGTTTCAAGTTCTCTGCCTCTGCAATCTTCATCACCTCT GCTGAATCTGATCCGTTACAATATTATAAGCAATGTTTTAGGATAATGGATAGAAATCCACATGTTCGGTTGGTAATAAT GACATCAGAAATGTGTAATATCATTGGAGCTAAAGGGCATGATTGTCGAGAATAAAGCAGAAAGATCATATGAATATGTA CCTATGAGCAAAACATATATATAAAAAATTGAGTTAGAAATTAAAATGGTTAGATAAGCTCATGACATTGGTTAAACTCA CATCTAATTTGAACTCTACATGAATACAAGCTTTTTGAGAGGATGACAAATTGACAATATTACCCGAACCTATTGGGTAT CCGTTCGAGTCGACCCGATTTTACAGGTAAAATTTGA
CDS sequence (LotjaGi3g1v0392800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGAAGAAGATGTTGGAGAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAA GGATGCTGAGGGGGTTCAGAGGGAAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGG GACTTAATGGAAGAACTGACCCTGAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATC AACAGAATGATTGATGGAGATGCTTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGTTCTGGCACTAC TTCTGGGAAGCAAAAATATGTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCC ATAGGAACAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAGCAAGCATTTCAAAACAAAAGGGGGT GTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTTCAATGAAGGCGCTTAAGTCCTCGTG TTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGTCACCTCTTGTGTGGCCTAATTTTCC GCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATTCAGAACCTTTGAGCAAGTTTGGGAA GAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCTCGATTCGAACCGCTATGTCTAAACT GCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTGAGCAACTGGTATGGATTGATACCAG AGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCCTTATTTGAAAAAGCTGAGGCACTAT GCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAACCCAAGAGTGCC TCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCAGAGTGAGTTGGAGGAAACCA AGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGTGAAAATTGGTGAGGAGTATGAGATT GTTATCACCAATCCTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCCATAACTCATCTCC AAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAATGATTTACAATTAG CTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGTTGATGTGTCGAAA GAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAATGCTGCAATTGCTT GGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAGCTCCGAGTTGTTA GACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAAGACTCCAAGGTGT ATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTGTTGCTTTCAATTG A
Protein sequence (LotjaGi3g1v0392800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKKMLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFI NRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFPINGKALSFIYSSKHFKTKGG VTAGTATTNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWE ELCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHY AGVLPLVTSDYGSSEGWIATNVNPRVPPELATYAVLPQIGYFEFIPQSELEETKGDTSFLSVDPQTVGLTEVKIGEEYEI VITNPAGLYRYRLGDVVKVMGFHNSSPKLKFVRRNNLLLTINIDKNTENDLQLAVETASKLLAEEKVEVVDYTSHVDVSK EPGHYVIFWEINGEASEEALGECCNCLDKSFVDAGYTSSRKVNCIGPLELRVVRRGTFRKILDHYLALGNTGNQFKTPRC ISPANTKVRQILCDNVVNNYFSVAFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 585 | 576 | 6.4E-291 | – | |
| PANTHER | 10 | 585 | 576 | 6.4E-291 | ||
| Coils | 15 | 35 | 21 | - | – | |
| Pfam | 21 | 562 | 542 | 3.6E-187 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0392800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…