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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0392800 |
| Transcript ID | LotjaGi3g1v0392800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT2G46370.4 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q9SKE2|JAR1_ARATH Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|A0A151SMT0|A0A151SMT0_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.5; Found in the gene: LotjaGi3g1v0392800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79189186..79194282) extracted from Lotus japonicus Gifu genome v1.2.
TGATTGGATTTTTCACCTTACACAATCACTCTGGTAAATTCCGTCCAAAATTCATGCACAATGATGGATGCATATTTGAG AGCTGAGAGAGTTTTTGTTTTATTCTTTCAGAGCCGAAACTGAAATTGATGATGATGCTACCTTGGGCCTTGGCCCTATA TATTGCATCTCTCAACGTGAATCTTGACCTCACTCACCACCACTCAGAACTGACCATCTGCATCTTCAGTTGCTCTTGTC TTGTTCCAAACAAAGTAAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCAGATCCATTACTCTCTCTCT CTTTCTTCATTTGTTTCTGTTTCTGTTTTCTCTGACCCTTTTCTCTGTCTGTCCCCCTCAGTACTGTAGTCTATAACACA CAACACAAAAGATAAGATTGTCCTAGGTTGGTGTTATTCATTTACAACTATTTCACTCACCCCACAAGAAGAAAGAAAGA AAAAGAGAAGACTTTACTTTCCATTTCCTTCTTTTTTTCCTCTGTTTTTCTTTTCTTTTACTTGTTTACTTTCATTGGTT TCTGGGTTTTTCAACTTGTTGTGGTTCCAGAATACCCAGATGAATCAAACAGGATATGCAGCTATTGTTGACTTTTTTTT CTCTCTCTTTTTATTTGAATATTTGATAAGCTTTTTGAATTTGATTCTGGTTCTAGTTCTGGTTAGTTTCTCTGCAAAAT CTATTTCAAAAAACTAATTTTTATTCATGAATCTATTTCAAAAACTTGGCTTTATGAGCACCCTTTTGTGGACTCTCTAG TCCTTTTACTCTTCAAAGACTACTTTTGGTCCCCTTTGACTTTTTTTTTTCTTTGGCTTTTTCTCTTCTTACAGTACTTT GGTCACTCAAAGTTACAATTTCTATTGAGTTCTGGAGATTTCTCTGGTTTGCTTTTCTGTTAACTTGATTTGATTGATGA AGAATTTTTCATTTTGATGCTTGACACAGATATTGTCTCAAAAAAACTTGGTTGACTTGCTTGGATAAGGGGGAATTCAA GCAAAAGCCAAATATCAAATCTCAGAATTTTCTTTGTGATTTCTGTTCTTGTTTCTGTTTCTGTCTTTCATTTTCCCCCT GTTTTATTTTACAATTTTCCCTCTGTTTTGGTCTTTTGAATGGTTCATAGAACCTGTAGAACGTGTATTTGTCCAGTTTT TTGGCATTGTTTTGGAAATTTATTCCTCTGGGGCCGGTGACTAGGAAAACAAACAAGGAAGATCAAAACAGCAAAAGAAA AAAAAAAGGAAACATTATATTAAAAAAAATTGTGATTGGATGGGGTGGTTTGGCTTTATACATATTTTGTTTTGTGTCAA TGATATCTTCAATAGTGTTTGTCTTTTTCAGAAATATATTTCTTTATCTATATTGATTATTTTGTTCCCCCAGTTTACTT TCACCGCCTTAGACTACTAGCATTTATGGAGGTACCAAAAATAATAATAAATCATACAATAATAATAATGAGAACTCCAA ACTCAATATAATTGGATGGTCCTTGACTCCTTTTTCTTTTTTTTCTGCAGTAGCTGAATGGCTGTGAAGAAGATGTTGGA GAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAAGGATGCTGAGGGGGTTCAGAGGG AAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGGGACTTAATGGAAGAACTGACCCT GAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATCAACAGAATGATTGATGGAGATGC TTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGGTCTGAGCATTTTTGACTTTATATTTTCGTGCACG TTTGGATGCACAGTGATAAATCACAGTAGACAGAAGTAGAAGCGATAACTTCTCTTAGCTTTTGCGACTGTCCACCATGA TTTTGACAACTGTATCCAAACATGTAATTCTTCTTTTTCTTTTAAGCAGTTTTTTTTGTCTCAATTCTTTTAAGCAGTTG AATGTGCTGTTCAAGAATTTCTTAGTCTGAAAAATTGGTAATCTTGCAGTTCTGGCACTACTTCTGGGAAGCAAAAATAT GTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCCATAGGAACAGGTATCCAAC TTCATGTCATGTACTTTAGTTTCTCTTTTGTTGTAAGATATGACCAAAATCGTACTTATAAAAGGCAGAGCAACCCTCAC CCCTAAACTACATGTTGGGTAAAGTTATGCCCGCCTAACCCAATTTCTATGATCTTTCCACAAACCTTTCATGCAAGATT GAATTAGGAAGTAACACAGTTCCATTATTCTGCAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAG CAAGCATTTCAAAACAAAAGGGGGTGTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTT CAATGAAGGCGCTTAAGTCCTCGTGTTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGT CACCTCTTGTGTGGCCTAATTTTCCGCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATT CAGAACCTTTGAGCAAGTTTGGGAAGAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCT CGATTCGAACCGCTATGTCTAAACTGCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTG AGCAACTGGTATGGATTGATACCAGAGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCC TTATTTGAAAAAGCTGAGGCACTATGCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAG CAACCAATGTGAACCCAAGAGTGCCTCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATC CCTCAGAGTGAGTTGGAGGAAACCAAGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGT GAAAATTGGTGAGGAGTATGAGATTGTTATCACCAATCCTGCAGGTATCAGATTCTCCTCTAATTTTTTCTTTTTCTCTT GTCTTGTTCTGATTAATGCATAAGGACTAATAACCACCAACCATTGCTTTCTTTTCTGCACAATGTTACATTTTGGTGCT GGCATAATACTTCCCAGAAAATCATTAATTATTTGACCAGTTAATTCTTGTTTGTTTTTCCCCTCTTCCCAAAGTATAGT ATAGTGGTTAATTTAAATTGGTAAATGTTGTTTTGAGATTTTTGCTATGCAGGATTTCCGAAGTGTTTAGGATGAACTAA GAACAATTTCAGAATATTATTCTGAGTATTATATTTTGGAAGGGAAGAATGCTGACTGGTTAGTCCATGTTGAGGAAAAA AATGCCAAACCTAGTGCTATAAAGCTCCCGTTATCTGCGAGATTCAGGAAGGAGCCGGATCTATTTTGTGAATCTAATGT AGGCAGTCTTACCTTGCATTTTTGCAAGAGGCTGATTCACGTGTTAGTCGGTCCATGTTAGGAATGTAATAAAAAATTGA GGTAAATTATTGGCTAATTGAGAAGATGATTCATTGGGGGGGGGGGACTTATCTTTCTGAGAAAGCTTTAAGCCAAAATG CTTATATAAAACCAATGCTTACCAGGTAAGGGTTGCTTTAGCTATTTAACTTTTTATTATTTTTGTGGGTTTTGGCCTTT GGGGGGGGGGGGGGGGGGGGGGGAGGGGCAGGGAAGCGGTTGCTTTGTCTTTGTTTATGATTTGTGATATGACCTTCACG GGACCAACTGAAAGTAATTTTTTCCTACTGGTTTCTAAAGGACCATAGTACATACCTAATCACATTAATGTAATATTGTG GACCTGTTTCTTGAAACTCACTGTACCTTAACTTGTCTGCATGTTCATTTTACCTAATAATGACAGTCTGTCTAATCATA TTTTTACATGCAATTAGTAATGCTGAGTATGTTTATTCCTTTTAACTTCAATGAGTAAGATTCATCCTAGTTTGTACATG TAATTAATCTTATCATTTGGCTAATTTTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCC ATAACTCATCTCCAAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAAT GATTTACAATTAGCTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGT TGATGTGTCGAAAGAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAAT GCTGCAATTGCTTGGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAG CTCCGAGTTGTTAGACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAA GACTCCAAGGTGTATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTG TTGCTTTCAATTGATATATAAAATGTGGGATCTGCTTTTCTTCCATTGTTTCAAGTTCTCTGCCTCTGCAATCTTCATCA CCTCTGCTGAATCTGATCCGTTACAATATTATAAGCAATGTTTTAGGATAATGGATAGAAATCCACATGTTCGGTTGGTA ATAATGACATCAGAAATGTGTAATATCATTGGAGCTAAAGGGCATGATTGTCGAGAATAAAGCAGAAAGATCATATGAAT ATGTACCTATGAGCAAAACATATATATAAAAAATTGAGTTAGAAATTAAAATGGTTA
CDS sequence (LotjaGi3g1v0392800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGAAGAAGATGTTGGAGAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAA GGATGCTGAGGGGGTTCAGAGGGAAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGG GACTTAATGGAAGAACTGACCCTGAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATC AACAGAATGATTGATGGAGATGCTTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGTTCTGGCACTAC TTCTGGGAAGCAAAAATATGTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCC ATAGGAACAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAGCAAGCATTTCAAAACAAAAGGGGGT GTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTTCAATGAAGGCGCTTAAGTCCTCGTG TTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGTCACCTCTTGTGTGGCCTAATTTTCC GCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATTCAGAACCTTTGAGCAAGTTTGGGAA GAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCTCGATTCGAACCGCTATGTCTAAACT GCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTGAGCAACTGGTATGGATTGATACCAG AGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCCTTATTTGAAAAAGCTGAGGCACTAT GCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAACCCAAGAGTGCC TCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCAGAGTGAGTTGGAGGAAACCA AGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGTGAAAATTGGTGAGGAGTATGAGATT GTTATCACCAATCCTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCCATAACTCATCTCC AAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAATGATTTACAATTAG CTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGTTGATGTGTCGAAA GAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAATGCTGCAATTGCTT GGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAGCTCCGAGTTGTTA GACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAAGACTCCAAGGTGT ATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTGTTGCTTTCAATTG A
Protein sequence (LotjaGi3g1v0392800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKKMLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFI NRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFPINGKALSFIYSSKHFKTKGG VTAGTATTNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWE ELCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHY AGVLPLVTSDYGSSEGWIATNVNPRVPPELATYAVLPQIGYFEFIPQSELEETKGDTSFLSVDPQTVGLTEVKIGEEYEI VITNPAGLYRYRLGDVVKVMGFHNSSPKLKFVRRNNLLLTINIDKNTENDLQLAVETASKLLAEEKVEVVDYTSHVDVSK EPGHYVIFWEINGEASEEALGECCNCLDKSFVDAGYTSSRKVNCIGPLELRVVRRGTFRKILDHYLALGNTGNQFKTPRC ISPANTKVRQILCDNVVNNYFSVAFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 585 | 576 | 6.4E-291 | – | |
| PANTHER | 10 | 585 | 576 | 6.4E-291 | ||
| Coils | 15 | 35 | 21 | - | – | |
| Pfam | 21 | 562 | 542 | 3.6E-187 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0392800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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