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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0392800 |
| Transcript ID | LotjaGi3g1v0392800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT2G46370.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q9SKE2|JAR1_ARATH Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|A0A151SMT0|A0A151SMT0_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.5; Found in the gene: LotjaGi3g1v0392800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79190778..79193999) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGGAGAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAAGGATGCTGAGGGGGT TCAGAGGGAAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGGGACTTAATGGAAGAA CTGACCCTGAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATCAACAGAATGATTGAT GGAGATGCTTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGGTCTGAGCATTTTTGACTTTATATTTT CGTGCACGTTTGGATGCACAGTGATAAATCACAGTAGACAGAAGTAGAAGCGATAACTTCTCTTAGCTTTTGCGACTGTC CACCATGATTTTGACAACTGTATCCAAACATGTAATTCTTCTTTTTCTTTTAAGCAGTTTTTTTTGTCTCAATTCTTTTA AGCAGTTGAATGTGCTGTTCAAGAATTTCTTAGTCTGAAAAATTGGTAATCTTGCAGTTCTGGCACTACTTCTGGGAAGC AAAAATATGTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCCATAGGAACAGG TATCCAACTTCATGTCATGTACTTTAGTTTCTCTTTTGTTGTAAGATATGACCAAAATCGTACTTATAAAAGGCAGAGCA ACCCTCACCCCTAAACTACATGTTGGGTAAAGTTATGCCCGCCTAACCCAATTTCTATGATCTTTCCACAAACCTTTCAT GCAAGATTGAATTAGGAAGTAACACAGTTCCATTATTCTGCAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATC TACAGCAGCAAGCATTTCAAAACAAAAGGGGGTGTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTT CAAGCCTTCAATGAAGGCGCTTAAGTCCTCGTGTTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGC TGTATTGTCACCTCTTGTGTGGCCTAATTTTCCGCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATC TACGCATTCAGAACCTTTGAGCAAGTTTGGGAAGAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGT GGTCCCCTCGATTCGAACCGCTATGTCTAAACTGCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCT TGGGATTGAGCAACTGGTATGGATTGATACCAGAGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCA ATGGAGCCTTATTTGAAAAAGCTGAGGCACTATGCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGG GTGGATAGCAACCAATGTGAACCCAAGAGTGCCTCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTG AATTCATCCCTCAGAGTGAGTTGGAGGAAACCAAGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTG ACTGAAGTGAAAATTGGTGAGGAGTATGAGATTGTTATCACCAATCCTGCAGGTATCAGATTCTCCTCTAATTTTTTCTT TTTCTCTTGTCTTGTTCTGATTAATGCATAAGGACTAATAACCACCAACCATTGCTTTCTTTTCTGCACAATGTTACATT TTGGTGCTGGCATAATACTTCCCAGAAAATCATTAATTATTTGACCAGTTAATTCTTGTTTGTTTTTCCCCTCTTCCCAA AGTATAGTATAGTGGTTAATTTAAATTGGTAAATGTTGTTTTGAGATTTTTGCTATGCAGGATTTCCGAAGTGTTTAGGA TGAACTAAGAACAATTTCAGAATATTATTCTGAGTATTATATTTTGGAAGGGAAGAATGCTGACTGGTTAGTCCATGTTG AGGAAAAAAATGCCAAACCTAGTGCTATAAAGCTCCCGTTATCTGCGAGATTCAGGAAGGAGCCGGATCTATTTTGTGAA TCTAATGTAGGCAGTCTTACCTTGCATTTTTGCAAGAGGCTGATTCACGTGTTAGTCGGTCCATGTTAGGAATGTAATAA AAAATTGAGGTAAATTATTGGCTAATTGAGAAGATGATTCATTGGGGGGGGGGGACTTATCTTTCTGAGAAAGCTTTAAG CCAAAATGCTTATATAAAACCAATGCTTACCAGGTAAGGGTTGCTTTAGCTATTTAACTTTTTATTATTTTTGTGGGTTT TGGCCTTTGGGGGGGGGGGGGGGGGGGGGGGAGGGGCAGGGAAGCGGTTGCTTTGTCTTTGTTTATGATTTGTGATATGA CCTTCACGGGACCAACTGAAAGTAATTTTTTCCTACTGGTTTCTAAAGGACCATAGTACATACCTAATCACATTAATGTA ATATTGTGGACCTGTTTCTTGAAACTCACTGTACCTTAACTTGTCTGCATGTTCATTTTACCTAATAATGACAGTCTGTC TAATCATATTTTTACATGCAATTAGTAATGCTGAGTATGTTTATTCCTTTTAACTTCAATGAGTAAGATTCATCCTAGTT TGTACATGTAATTAATCTTATCATTTGGCTAATTTTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTAT GGGGTTCCATAACTCATCTCCAAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACA CAGAGAATGATTTACAATTAGCTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACC AGTCATGTTGATGTGTCGAAAGAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACT TGGTGAATGCTGCAATTGCTTGGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCC CGCTCGAGCTCCGAGTTGTTAGACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAAT CAGTTCAAGACTCCAAGGTGTATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTA TTTCAGTGTTGCTTTCAATTGA
CDS sequence (LotjaGi3g1v0392800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGAGAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAAGGATGCTGAGGGGGT TCAGAGGGAAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGGGACTTAATGGAAGAA CTGACCCTGAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATCAACAGAATGATTGAT GGAGATGCTTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGTTCTGGCACTACTTCTGGGAAGCAAAA ATATGTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCCATAGGAACAGAGAGT TTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAGCAAGCATTTCAAAACAAAAGGGGGTGTCACAGCAGGAACT GCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTTCAATGAAGGCGCTTAAGTCCTCGTGTTGCAGCCCAGATGA AGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGTCACCTCTTGTGTGGCCTAATTTTCCGCGAGGAAGTTCAAT TGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATTCAGAACCTTTGAGCAAGTTTGGGAAGAGCTTTGTGCTGAT ATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCTCGATTCGAACCGCTATGTCTAAACTGCTTAAACCGGACCC TGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTGAGCAACTGGTATGGATTGATACCAGAGCTTTTCCCAAATG CTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCCTTATTTGAAAAAGCTGAGGCACTATGCAGGAGTGTTGCCT TTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAACCCAAGAGTGCCTCCTGAATTGGCCAC TTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCAGAGTGAGTTGGAGGAAACCAAGGGAGATACTAGTT TTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGTGAAAATTGGTGAGGAGTATGAGATTGTTATCACCAATCCT GCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCCATAACTCATCTCCAAAACTCAAGTTTGT TCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAATGATTTACAATTAGCTGTGGAAACAGCAT CCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGTTGATGTGTCGAAAGAACCGGGGCACTAT GTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAATGCTGCAATTGCTTGGATAAGTCCTTTGT GGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAGCTCCGAGTTGTTAGACGAGGAACGTTTC GGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAAGACTCCAAGGTGTATTAGTCCTGCAAAC ACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTGTTGCTTTCAATTGA
Protein sequence (LotjaGi3g1v0392800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFINRMID GDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFPINGKALSFIYSSKHFKTKGGVTAGT ATTNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCAD IREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHYAGVLP LVTSDYGSSEGWIATNVNPRVPPELATYAVLPQIGYFEFIPQSELEETKGDTSFLSVDPQTVGLTEVKIGEEYEIVITNP AGLYRYRLGDVVKVMGFHNSSPKLKFVRRNNLLLTINIDKNTENDLQLAVETASKLLAEEKVEVVDYTSHVDVSKEPGHY VIFWEINGEASEEALGECCNCLDKSFVDAGYTSSRKVNCIGPLELRVVRRGTFRKILDHYLALGNTGNQFKTPRCISPAN TKVRQILCDNVVNNYFSVAFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 580 | 576 | 7.0E-291 | – | |
| PANTHER | 5 | 580 | 576 | 7.0E-291 | ||
| Coils | 10 | 30 | 21 | - | – | |
| Pfam | 16 | 557 | 542 | 3.5E-187 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0392800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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