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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0394400 |
| Transcript ID | LotjaGi3g1v0394400.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | helicase with zinc finger protein; TAIR: AT2G46420.1 helicase with zinc finger protein; Swiss-Prot: sp|Q6NYU2|HELZ_DANRE Probable helicase with zinc finger domain; TrEMBL-Plants: tr|A0A0L9T4H0|A0A0L9T4H0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0394400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79420916..79426872) extracted from Lotus japonicus Gifu genome v1.2.
TGAGATATTCCCTCCTTGTTACTTAGCACCTAACTATCTCATATTGTCACAATTATATTTTATTTTTCTTTCTTACTTAT TTTCACGCGCTGTCTCTTTCACTCTCACTTCACTTCACCTTTGCTTTGAAGATCTCTCTCTCGCCCACTGTAATTGTAAT TTTCTTCCCCAGCAACTCTCACTTTCGCCCACACTTTCCAAAATATCTCCTTAAACCACAATGCCAATTATTCACTGCTC ATTTCCATGGAGGATTTTCTCTCTTGAACCTTCTTCACCTTCAACTTCAACCCCCATTTACCTTCTTGCTTTTTTCTACC AAAGTTTCACTCTTTTCTCCTTTCTCTGAGTTGATGCATCATTTTCAAGCTATTTCAGCTTCAACTGGTTGGTGGGGTTT TCTCTATTTATCAAGATAAACACTGTTCTTCTTCTTCTTCTGCTTCTTCTCTTTCCTTCTTCTTTTCTTGTTTGGTTGGA GATTCAGGAACTGGGTTTGAGGTAATATAATGCTAGATCTTCATTTCCCTTTTTTGCTTCATGGGCACTTGATTTTTGGT TCTATGTTGTCTTGTAGCTTAAAAAGTTTGCTCCTTTCAAAGAGTTATTTGCTTGATGAATAAACTTCACTTCCAATTAG GAACTGAGATCTGGTTTTTTCCAGATTTTTATGTCTACTTTGTGATATTAGTTCATGTGAATAAACTATCCAGAACCAGA GCCAACTTTGATTTTTATTTTTTTTTCTCTTGCTGAAGAAATTAAAATTCATCTCAAAATTAGTCATGGTGAAACATCTG ATTATTCTTTCATAAGGAATGGTGCCATGGTGGAATTGTTAAGTTGAATGAAAGATGCTACTGGAAATATGGTTTTTTAT TTTTGCATGTCAAACTTACTGCACTAATTTTCTTGTGTGTACTTTAGTGTAGTGTGATAAATTAAATTACTATCCTTTCT TTCTAATAAACTTCATATGTACAGTTAATGGACCTTTTTCTTTTCACTGTTTTTTTTTAACCACATAGAGGCAATCACAC TTTCTTTACCATATGAGGTTCTCTCTGATTAAGAAGATAGTGATTCTTATGTTTATTTAAGGGTATTTTAAGACAGATGT GAATTTCTTTAAAGATGGTTTTGTTGACTTGAAGCACAACAAACTTATTGAAGCGGTATGGTTTAAAACTCTCATTAGTC TTCTTATTGCAGATGAAAGCTATTTCAACTTGGGGGTGTCATAGACACACATGCTAACAATCTTGGATTCAAAGAAAGTT AGTGATTACTTAAATTTCCAAAAGGCATGCAGTCAATGACCTCTCTGCTAAAATGAAGAACTTGCAGGTTCTCCCATGTA CTTACTTTGCAACATCCACAATTTCAATGCTCAATTTGATGGATCTAGTGTGCATGGCCTCATAGGACAGCAGTATTAAG AATATAAATGCATGGCATTGTTTCATTGAAGTTAAGATAAAACCAACACCTTGTATGCATGTTGTGCCCTTTTCTGGTAA AGGGACAAAGTTAACCTAAGGAAACTACTGAATTCTATCATATATTATGTGAACATATATTTTCCCTGCATTGGCTGAAC TTGTAACATCAATGGTGAAAATATCATTGGGATTTGTTATATAGCCAGTTAGCCACCCTTTGAGAAATTTCACCATTTCC ATGAAAAATACTTAAATTCTCATGTTATTTCTAGTTGTCTAATACTCAGTAATGCTTTAACGAGCAAACTATTTTTATTG AATACTCTAACAAATAAATGATTTTGAACCTGCTGTATCCATCCTTGCTTTCTACTTTGATGGTGATGCGAACTCAGCCT GATCATCCAGATTTGTTTTATTACACTTTTTTGCTTCTTGCATATATTGTAATTATATTAGATTTACTTTTCTGGATTCA TAGAGCACGGAAGAATTACAATCGTCAACTCAAGCTTCTCATGAGCCCAAGATTGAACAACCAAACAATCATACGACTGA TGCTCCTGTCACAGACTCAGGTTCAGCTTCTGCTTCAAGCAATGATAGCAAAAAGGTTTCACGACAGGATATTGAGCTGG TAAGGATATATAGTGTTTCCTAAACATCTGACTAGTTTCCTACAATTCTCTACTTTTCCACTTTCTCCCTACATCGTGTG GAATGAATATTTACAGGTCCAGAAATTTTAAAGAAACTAGTCTGAACTAATCTGTTTCTTTTATTATTCAAAAACCTTTT GCAGGTCCAGAATCTAATAGAAAGGTGTCTGCAATTATATATGAATAAAGATGAGGTGGTTAAAACGCTACTGACTCGGG CAAAGATAGATCCTGGATTTACCACTCTTGGTAGGCATCTTGAAGTCTGTGTCAGCCCATTTATGTGTTGCATTCTAATG ATTAATGACCTGTTGTATATGCTTTTCATTTAAAATCTTTACATCCTTATCATTTTCAATGTTCTATTAAATAAAGTTGT TATTTGGTCTACATGTTGATTACATGGAAATCAGCAAAACCTGATAGTTGAGACCCATTGGTTTTAAAAACCACGACATT GCTTGCATTATTATATAACTTCCTTTAAAAGTGGAAATAAACTCATTTCACATTTTTGTAATCGATGTTTTTTTTATTCA GTGTGGCAGAAGTTGGAAGAAGAGAATGCTGATTTCTTCAGGGCCTACTATATTAGGCTAAAATTGAAAAAGCAAATACT TCTATTCAATCATTTACTGGAGCATCAGTATCATCTGATGAAGTCTCCCATGCCTGCAAAGGTTCCATTGGCTCCAATGC AGAATGGAATCCATCCAATGCCTAGTATATTCTTAACCTCTCATCTATGATCTATTTGTGTGTGTGTAAAATTTGAACCC AAATTATCTTCACTTCACCTCTTTGTATGGACAAAAAATGAACTTATAGTTAAGACTTAAGGAATGACACTTATATTTCA CATCTTATGTTATGCAATAATTCTCACTGCATTCTTAACTTCATGGCCAACAATAAGGCAAGGAACAAACCATGTCTCAT GGAAGAGGTCTTGATTGGTACTTGCTTGCTTCCCTTTTATGAAAAGGAAAATAGTGAGAAGACTCTCAGGGTTCTTAGAA GTTCTTAAAAACCTTTTAGAGGCTTCATAACTTGTAGTATCTATACGTATAATGAGCAGCCCAATGAGTATTTAAGCTAA ATGCAGGGTATCTGCTAATCTTTTATGATTTATGAGCTTACTATTCTCAACTCATGAAGATTTATTTTGGATACTTGAGA AATGGCCAATATGGGTGCTAGTACAAGATTTTCGTATGACTATGTTACTGGAAACTTTCCTTTTCCAGACTGGCTGCAAA AGCTGGGAGCGTCAGTAGTTGTTAATTGTTATGTCTTAGTGTAGTGTATCTTTTTGCTGGAGATTGTTGTTAGTTAGTCA ATTCATCGCGGGCTTTGTGCTGCCCAAAATTAAGGAAACTTTTTGCATATTTCTTGGTTGAGTGTTGATTTTTATGGTTT CCTAGGGTTTAATCTGCTATATTAACTCTTGTAAATACTGTTTAGCCTGAGAATATTTGAGCCTTTTTCATGGTCTTTTT GTGTGGATTGCTGAATACCTTTCAATTTGAAAAGCTGATGGCATAAATTATATGCATAAACTTGTGCTTTATATTTTTCT TGTTTTCCTGCGCTATTCTTTAACACCATCTGTTTGCAGTGCAGTCAACAACCTGCCTATCGGATACCCAGTTCTACAGC AACATCCCATTGCAGCTGCAGGTCAACCTCATATTGACCCCATGGGTTGTGGCATGTCAAGTTGTCATGTGGTTAACGGA GTCCCTGCACCGAGCAATTTTCATCCCATTCGGATGAATTCTGGGAATGAGTGAGAACTTCTCCAACTACATATAATTCT ATTATGTGCATTCATACATTGAACGATATTGCGTAAAGATCATTTCTGGATGATTTTGCATAGCCAGCTTTTGTATTTTA GCTTTCTGAAATGTCTAAATGGGTGTTTTGTGGTTAAGAAGCTGCAGTTGATTTCTCCAACAGTTTAGTAGTGTGACTGA TAAAATGTGTTTCTGACTCTATCAAAATGGTCCATGGTCATGTTTGTATATATTTAATTTTCTTGCTAGGGTTTGCCATG CAACATCCAGTAAAAGGATTTTTTCATGAAACTATGTCCCCGAATTGTGTTTATACACTCTTATGCACATTATATACCCA GATTGTTGTGGTGGTCATGCTTTGGTTGAATCTGGAATACCTTTTCGTTTCTTTCTTTTAAAAGTACTTTGTCTACTTTT GTTCTTGTTGAAGCATGGTGATGGACCACAGCGCTCCTGATGCGGCTCCAACGATTCCACCAAATGGTGTAATGTCATCC GAAATGCCAGTGAGTCCGACTTCAGCATCCAGTGGTCATTTCCCCTTCACTGCATCAGAAATATCAGGAATGGGCACAGA TGCATCAGCTCTTGATACCGCATTTACATCTGATGTGGCAAGTTCAGGAGGACTACAACTTGCACCAGATGGCAGCAACG GAATTTCTAGATCGCTCGATCAAATTCAGTGGAATTTTAGCCTATCTGATCTGACAGCAGATTTGCCAAACTTGGGAGGT AATTTCTTAGTTGACTCTCTTATCTTATCCACCTTTTAATATGCAGTTTAGTTACATGTCTTATAGAAGTGAAGTTATTT GAGATGTACAACTTATTCTATCCCTTATATGCCCAAAGTAATCTTGTATATTAAGAAAGGTGAACCTGTTGGAGTCTAAA CTAAAGTTTCAACTAGTGCAGTGAAAAGTCCTTCCCAAAAGATGGAAAAAGCATTTAATGTATTGGATTATGAGTAAAAT TAGACTTTGAACTGTTCTGTTTCCTTATCTATGGAGAACTGTTAGTGTGCAAATATTCTTTTAGTTATCATAAACATATC TACTATTTTTGCAGCACCTTTAAACAATTTGCTATTGATGACTTAAGTGCTATCAAATCGCAGTAAATGATGCATAAACA TTTTAGTTATTGCTAAATGCAGTCAAGGATTATAGTTAATATTTTACGTGTCCATCATCTCTTCATATTTTATATGCTCA TCATTGTGGGCATTTTCATGCATTTTTAATGAATTATGTTGAATTTTATGCAGACCTAGGAGCTCTTGGAAACTATCCTG GCTCACCATTTTTGCCATCTGATTCTGACATGTTGCTCGAGTCACCAGATCAACAGGATATAGGTAATGTTAAATACTAT CCTGGCTCACCATTTTTGTCATCTAATTTTGTTATTGCTTGTAGTTTTGAGGTTCAGTTTATGTTTGATTTAACAAAACC TTTTTTTTTTTTTTTTTTAATTTCAGTGGATGATTTCTTTGCTAACTCTGAGCCACAATGTTCTCAATCAGATGAGGAGA AAACTTAAGGTGAGGCAAGTTGTCATTAATTGTTAGGTTAGGAGAGAATTAGGATTAATAAATGTCATCTAGCTTACTTT ACCTGGCATACAGGCTTACTGTTACCAATGTGTAGGCATCCTCACCATGAGGATACAATGTCAGATTGACAGTTGTAATC TTTTGCATTCTTTTCAGAAATCTGTTATCAGGAATAGATGGGGACAGTGAATAGGATGTAATGTAGTTGTTTAATGCATT TGGATATATTTAATTATACATTGCTTGGATTCTAGTGAAAATATTGGTATCATTTCTAGTTATGAGTTTCACATTATATA GTGAGATTAATGTGTTGAAAAGTTGTACATAAATTTTGGTTTAAAAAGGTATCCCATAGTAGGCAGTCATGAGACTAATC CTCCTAAGCTCTGAGATCACGTTAAGTGAGTAGACATCTCCCAGTAAATCCTTCTCCATACGCATGATTGATGATATTCG TTAATGAAATTTAGGAATTGGTGAATGATAGAGCGGG
CDS sequence (LotjaGi3g1v0394400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACTTGCAGAGCACGGAAGAATTACAATCGTCAACTCAAGCTTCTCATGAGCCCAAGATTGAACAACCAAACAA TCATACGACTGATGCTCCTGTCACAGACTCAGGTTCAGCTTCTGCTTCAAGCAATGATAGCAAAAAGGTTTCACGACAGG ATATTGAGCTGGTCCAGAATCTAATAGAAAGGTGTCTGCAATTATATATGAATAAAGATGAGGTGGTTAAAACGCTACTG ACTCGGGCAAAGATAGATCCTGGATTTACCACTCTTGTGTGGCAGAAGTTGGAAGAAGAGAATGCTGATTTCTTCAGGGC CTACTATATTAGGCTAAAATTGAAAAAGCAAATACTTCTATTCAATCATTTACTGGAGCATCAGTATCATCTGATGAAGT CTCCCATGCCTGCAAAGGTTCCATTGGCTCCAATGCAGAATGGAATCCATCCAATGCCTATCAACAACCTGCCTATCGGA TACCCAGTTCTACAGCAACATCCCATTGCAGCTGCAGGTCAACCTCATATTGACCCCATGGGTTGTGGCATGTCAAGTTG TCATGTGGTTAACGGAGTCCCTGCACCGAGCAATTTTCATCCCATTCGGATGAATTCTGGGAATGACATGGTGATGGACC ACAGCGCTCCTGATGCGGCTCCAACGATTCCACCAAATGGTGTAATGTCATCCGAAATGCCAGTGAGTCCGACTTCAGCA TCCAGTGGTCATTTCCCCTTCACTGCATCAGAAATATCAGGAATGGGCACAGATGCATCAGCTCTTGATACCGCATTTAC ATCTGATGTGGCAAGTTCAGGAGGACTACAACTTGCACCAGATGGCAGCAACGGAATTTCTAGATCGCTCGATCAAATTC AGTGGAATTTTAGCCTATCTGATCTGACAGCAGATTTGCCAAACTTGGGAGACCTAGGAGCTCTTGGAAACTATCCTGGC TCACCATTTTTGCCATCTGATTCTGACATGTTGCTCGAGTCACCAGATCAACAGGATATAGTGGATGATTTCTTTGCTAA CTCTGAGCCACAATGTTCTCAATCAGATGAGGAGAAAACTTAA
Protein sequence (LotjaGi3g1v0394400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNLQSTEELQSSTQASHEPKIEQPNNHTTDAPVTDSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLL TRAKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKSPMPAKVPLAPMQNGIHPMPINNLPIG YPVLQQHPIAAAGQPHIDPMGCGMSSCHVVNGVPAPSNFHPIRMNSGNDMVMDHSAPDAAPTIPPNGVMSSEMPVSPTSA SSGHFPFTASEISGMGTDASALDTAFTSDVASSGGLQLAPDGSNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPG SPFLPSDSDMLLESPDQQDIVDDFFANSEPQCSQSDEEKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| MobiDBLite | 1 | 49 | 49 | - | – | |
| PANTHER | 3 | 357 | 355 | 1.4E-186 | – | |
| PANTHER | 3 | 357 | 355 | 1.4E-186 | ||
| TIGRFAM | 55 | 111 | 57 | 2.1E-29 | ||
| Pfam | 58 | 109 | 52 | 8.7E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0394400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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