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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0395400 |
| Transcript ID | LotjaGi3g1v0395400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B, putative; TAIR: AT5G24270.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|O81223|CNBL4_ARATH Calcineurin B-like protein 4; TrEMBL-Plants: tr|I3SRH3|I3SRH3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0395400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79535063..79540422) extracted from Lotus japonicus Gifu genome v1.2.
TAACTTGACCTAAATCCAGCACCGTGTTTTGCCTAAAATTGCTCATGTCATGTCATGTTGCATATAATAAAGTGCCTTTG GATTTGGATATACGAGTCTGACATAATGAATACGCAAGTGAAGTCAAATTCAAGAAGCCACTTACTTGAACCTGTGAACG TGAAAAATCAAGAGGGAAACCACATATCTTTTTCCTTTTTCTTGTATTTAAGGGGATGCAATTGCATTGGTTGGTTTTTC TACTTTCTTGCCTCTTTGCACTTTTGTTGTTCACTTTCTGGATTCATCCTAAAAGAAAAGGTCTGAATTGATTTCTGCAA CCCTAAAAGCTTTCATTTCAAATCATAATTATCAGTGTTGTTGAAATTTCTGCTGATTAATCATAATAATTTGTTATGTG TTGAAATTTGCATTGCCTTGCCTTAATTGTCATGGTGGGTGATGGTGTCAGGTTGGAGAAGTTCAATTCAGGAGGAGCTA TCTGCCAAGAAATTCTTAAGCTGTTGAATAGAGTTTTGGATATAATGGGTTGCATTCCCTCAAAAGTAGCAGAAAATAAG CACATGTCTTTAGAAGTTGCAGAAGATAAGAGTCATAAGAGAACCCTACATTCAGAAGAAGTGACAGAAAATAAGCTTAA ACCTGGTCATGAGGATTTTTCTGCCCTTGCTTCTGAAACACCATGTGAGTAAAAGAAGCTTCCTTAACTTAAAAGGAGTT TGAGAGTATAAATTATTTTGTGCAATGTAGTGATTTGAAATGATTTTGTGTGAATCTAATATATCTTGATTACTCTAGTG ATTTGGTTGTTTATGAATAACATCTAGGGATTTGAAACTCTTTTCTTGTGCCTGGCAGTTACTGCAAGTGAGGTGGAAAC CTTGAAGGAGTTGTTCCAAAAATTAAGCTCTTCTATTGTTAAAGATGGATTTATTCAAAAGGTGGTTTTAAAATTCAGCA TCTTTATATCATAGTTACTTGAAATTGGAATCTCTCAAGGATGGCAGAATCAGTATCTTGGTACTTGGTACATTCATTTA TTGCTGGTAATTTATAATGATAGATTTGTTAATTATCTCTATATCTATTTACAGGAAGAGCTTTACTTTGCTCTTTTCAG AAACAGCAACAAGCGAAATCTCTTTTTGGACAGGGTATGTGGATCTAATTGTGTTGTTTTTGCTGATTGATTGTAAAGTG TCCTGGTTCTGAACAATCCTATTTACCTTATAATTGATGAGTCATTTGACAGTATTGGTTGGTCAGTAAATTTCATATAG CGTTATTAGTTAGGTTGCGTTGTGAAATTGAAATGCCTTTACTAGTAATTCTTCTTGTACCAGTCAAGAAGGAATTTTAC TCATTGGTTTTGGTAGTGTTTTGTTGTCTTAGTGACTATGCTTTGTTTTGAATTCTAAACAGATTAAGTTATTCATGGTG CTAGTGCTCACCTAAATATAAGAAGACTCAAACCTGCCCCTTAACTTAAAATTGATAAATCAAAACATGCTTAAAGCAAT TTGCTTAAAGAAATAAAGCAATATGCTGATTAAAGAGAGTTCGGTTGTTATTTCCCCTTTATAAAAGGCAAGACCCGATT CATAATAAACCAGGTTCTCTCTTCAGCTAAGAAAATGGCTGCACAAACCCTAGATCTAGAATTCCTAGGACATGGTGTGA ACACTTAGTAATTATGTATGTGTAATTCCATTTACTCTAGTCTATACACATAAATAATATCCCTGCTATACAACCATAAA ACTTATGCCGAGTGCCATTTTCAATTCAAGTTTAGGGACTGTGAGGTTTGAGAATATGTCTCTGTTTTCATTTCCTATTT TCACACTTATAATTACAGAAGTGCCGCAATATTCTTTGAAAACAGGAAACGAATTGAAGTAAGGTGGAAATTTTGTAATT ATTAGTGAAAACAAGAAATAAAGAAAAACATTTTCTCACACCAAACAGGCCCTTGTATTTTTTGTTTGAAACATGCAGTT CACTTTTCTTCTGTGAATGGTCCATCCTATTGTTACTGTGATAGAACCACCCTGAAATCTGTTATTATTTCTCACAAATC CCTAATTCCCAAATTGGGAACTAGAGCAAAATACAAGTGAGAGTCCACACCCTCTTCCTAATCCCAATACCCAAATGATA CAAAAGATGATTAATGTTCTCTAACCCCCTCTTATTTATAGGCACAAGCCTAACTAACCTACTAACTGACTATCTAACTA TGTAATAAGTCCCTCACTTAACTCACTAAACCATGTGATATGTGAGTACCTATCAATCTGACATGTAGAGGTGTTGTTTT AAAGCTTGCCGATCATGGTCATGAATTCTTATCTTCTTCATTAAATTTTGACTCCATGCAGATGTTTGATCTTTTTGATG TCAATGGCAGTGGCCAGATCGAGTTTGGGGAATTTGTTCGATCCTTGAGTGTCTTTCACCCAAAAGCTTCTGAAGCTGTG AAAATAAAATGTAAGAAATATAAGTCATGGTACAAAAGCAATGTATACATCCCAATTTGTTTATCATGCATAGGAGCCCG TTTGGATACGAGCTTATTGGAGTTTCTCTACTAAAAAATGCACTAACTAAGCTCCAATAAGTGCTCTTTGATCCGCATCT GAACGGGCTCTAAGTAATACAATACAATCATAGAATACATTATTCATTAGCAGATGTTATTTTAGGTAATATTGTTAAGC TGATGATTATTAACTGTAATTTTTTTTTTCTGGCAGATGCATTTAAACTGTATGACTTGAGGCACACTGGTTACATTGAG CGCGAAGAGGTAAATACTCCCAGTCTTGCATAGGGAATCTGTATAATTCTAATCAGAAATGTTTTATGAGTTGGCTAAAA GCAAATAAGCTTGCATAGTTAGTAATATAAACATAAGAAAGCATTAGTATGTGTCTAATAAACATACTTGATATTGAGCT AGCTCGGAACATGTTTTATAAGTTGCTAGGTAACGATTTTGGATACCATATCAGTAATCACTGTATCTGTAAGACTAGTT TACTGCACATCTATTGCTTTTCTAATTGTACACAGCATGGGTTGAATATCTGCCTAACAACATCAGATGGTCAATGTTGG TTCATTGGCTGAATATCCGTGCCTATGCTCAGGATCATATTGCACGGGAGTAATGAGTAATGACTAAACGAACATCTGCA CCAACCTCTAGAAAAGTAGAATTGGATATGTTAGTTCTTGTCAAGGGTTGTTTCTTTGTAAATTTCCCAATATCTGAGTG ACATCTGAACCTGGTTTATGAAAATTTGAATGAAGCATTTGCTTGGTTTATTGACATTTCTCCTTACATAGCGAAATATC ACGCGGAGGACCTGAATAATATATTTACACAGTTCTCTGTATAATCTAATTCATGACTCCACAGGGGACAAGTTTGTTGG AAATATTTATTTTATATTAGTTTCTCATCTTACAAAAAATATTAATTTAACTGCTCTTGATTTAACCTTGCAAAGATATG AAAATTTACAGTTAAAGGAGATGGTGCAGGCGATTTTGGTTGAATCTGATCTGGTTCTCTCTGATGATGTGGTTGAAACA ATTGTGGGCAAGGTTTGTTTTAGTATCATTATCACTCTGAAATCATCATTGTTAAATTTTTCCTTACAAAGGTTCTGATA TTTTCTGTGGTGTTGAGTGTCAACAGACATTTGTGGAGGCCGACTCAAAAGGCGATGGGAGGATTGACCTAGAAGAATGG AAAGAATACGTGGGAAAGAATCCATCAGTGCTCAAGAACATGACTCTACCTTATCTAATGTACGTTTTAAATTTTATGGC ATGAGTCTTCTGTTGCTTGCATATGAAGTTCTTGATATAGTACCCAAATGCATTCAGTTAAATGGTTCTTTATTCCTGTT TTTTTATGGATTTAATGATAGCTATTGCATGATATATAAACAACATCGAACACAAGCAACTTGAATTTTTCATCACTATA TATGCTATTCCAAGTAACCTGGTTGTTTCTAAACCACTTCTTGATGCTAATTTCAGGGACATAACTCAAGCATTTCCCAG TTTTGTGCTGAATGCAGAAACAGAAGAATCACACTTGTAGCTTCAATATGTATATCTTTACCCAGAAAAATCTATCATCC AATACAAAGTACAAAGAAGAATTCACAGGGGGAAGTATGGCTATTCTTGTTTATGAATCTCTTGTCTATGGTGGTTATGA AACGGTGGCAGAAAAGCCTGCAATTCGCCTTCAGAAAGAAACGATAAACATTGCACAGCTAGAGAAAATTTTAATTTGGC ACCTTATGATGCGGAAGCTAGTCCATTGAATCCCCAGACAGGAAGGTTTCAAGCCTCATGATTTTACTTTTGTTAACCTC AAATCCATAATTCTTTTTTAACAGAGCTTGAGTGTAATTGTGATGTGTTCAGAGTAAAACCAGAAGTCTGTGTGACCATC AAATGTACATATGTGCTCGGGTATTCCGTGTCTATTATCCATGTCCTGCTTTTCATGATCAAGGATGAATTCCGGGTACC GGATGTTTATACCAAAAAATGAAGGATGAATTGGTTGAACTTACTCCGTCTAGTTCTATTTATAAGTAGTATAACTTTTT ATGAGTTTTTTTCCCTAAAAAGTTATGAGTCACTTTATAATATTATAAAGTATTTGATATTTTTTTTCTGAATTTATCCT CATATTTAAAAGAGATTGTGAGAATTTGAAAAATTATTAACTTAGAGATAAAAAATTAAAAATCCATGAGTTTTAAAAAA CAATTAATGTAGATAGGATTAATTGAATGAGTAAAATAAAGGTAATTTAGATAAATTAATAAAAATATTATAAATTTATT GTTTGTATATATTTTTCTTAATCCTAAAGACTTAGATGGATGTGGCTTATAAATAGGAAAAATTGGATAATAACTACTAC TCCATAGAAAAATTTGTTTCTGACTCTAGAAAAATCAAAGTAGGCCACATGACAACTAAATCAATGAAACTAATTTCCTT GTAGCTTACTTTCTATTGTTAAAGTATCAAAATATAAACTCTAAACTCTTGCTGGTCTACTCACCAATTTACATTGTTAA CCGGTCTGTCCTTACCCTGCAGTGTCATCAAATTGTATCTTGGGCCTTGGGCCAATTTGAATGAAATCCATTCACCTTTG ATAAAAAAAAAACAGGTGTTGATAACTTCTGTGAAGTAGAAACATGGTAATGTAATGGTGGAAATATAGTAATGTGATTA TTATATTTTAAACTCAAATGACTTTTGTGCGGGGATATTAGGATATAATATATATAAAACTATTTATATTGTTTTTACCT
CDS sequence (LotjaGi3g1v0395400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGCATTCCCTCAAAAGTAGCAGAAAATAAGCACATGTCTTTAGAAGTTGCAGAAGATAAGAGTCATAAGAGAAC CCTACATTCAGAAGAAGTGACAGAAAATAAGCTTAAACCTGGTCATGAGGATTTTTCTGCCCTTGCTTCTGAAACACCAT TTACTGCAAGTGAGGTGGAAACCTTGAAGGAGTTGTTCCAAAAATTAAGCTCTTCTATTGTTAAAGATGGATTTATTCAA AAGGAAGAGCTTTACTTTGCTCTTTTCAGAAACAGCAACAAGCGAAATCTCTTTTTGGACAGGATGTTTGATCTTTTTGA TGTCAATGGCAGTGGCCAGATCGAGTTTGGGGAATTTGTTCGATCCTTGAGTGTCTTTCACCCAAAAGCTTCTGAAGCTG TGAAAATAAAATATGCATTTAAACTGTATGACTTGAGGCACACTGGTTACATTGAGCGCGAAGAGTTAAAGGAGATGGTG CAGGCGATTTTGGTTGAATCTGATCTGGTTCTCTCTGATGATGTGGTTGAAACAATTGTGGGCAAGACATTTGTGGAGGC CGACTCAAAAGGCGATGGGAGGATTGACCTAGAAGAATGGAAAGAATACGTGGGAAAGAATCCATCAGTGCTCAAGAACA TGACTCTACCTTATCTAATGGACATAACTCAAGCATTTCCCAGTTTTGTGCTGAATGCAGAAACAGAAGAATCACACTTG TAG
Protein sequence (LotjaGi3g1v0395400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCIPSKVAENKHMSLEVAEDKSHKRTLHSEEVTENKLKPGHEDFSALASETPFTASEVETLKELFQKLSSSIVKDGFIQ KEELYFALFRNSNKRNLFLDRMFDLFDVNGSGQIEFGEFVRSLSVFHPKASEAVKIKYAFKLYDLRHTGYIEREELKEMV QAILVESDLVLSDDVVETIVGKTFVEADSKGDGRIDLEEWKEYVGKNPSVLKNMTLPYLMDITQAFPSFVLNAETEESHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 239 | 206 | 6.6E-105 | – | |
| PANTHER | 34 | 239 | 206 | 6.6E-105 | – | |
| Gene3D | 44 | 238 | 195 | 2.4E-60 | – | |
| SUPERFAMILY | 47 | 229 | 183 | 7.4E-44 | ||
| ProSiteProfiles | 94 | 129 | 36 | 12.979 | ||
| SMART | 98 | 126 | 29 | 9.6E-4 | ||
| Pfam | 99 | 122 | 24 | 8.3E-7 | ||
| CDD | 99 | 161 | 63 | 9.2758E-9 | ||
| PRINTS | 102 | 123 | 22 | 6.8E-11 | – | |
| ProSitePatterns | 107 | 119 | 13 | - | ||
| ProSiteProfiles | 131 | 166 | 36 | 12.282 | ||
| CDD | 135 | 202 | 68 | 3.02481E-10 | ||
| SMART | 135 | 163 | 29 | 0.32 | ||
| Pfam | 135 | 203 | 69 | 1.6E-11 | ||
| PRINTS | 149 | 167 | 19 | 6.8E-11 | – | |
| ProSiteProfiles | 175 | 210 | 36 | 9.436 | ||
| SMART | 179 | 207 | 29 | 5.9 | ||
| PRINTS | 195 | 215 | 21 | 6.8E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi3g1v0395400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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