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LotjaGi3g1v0404700.1

Overview

Field Value
Gene ID LotjaGi3g1v0404700
Transcript ID LotjaGi3g1v0404700.1
Lotus japonicus genome version Gifu v1.2
Description 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT4G10500.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9ZSA8|DLO1_ARATH Protein DMR6-LIKE OXYGENASE 1; TrEMBL-Plants: tr|I1MKB2|I1MKB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0404700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:80721663..80725535) extracted from Lotus japonicus Gifu genome v1.2.

TTTAAAGATTTATCTGTAAATAATAAAATAATAATTATTCCTTACACACATTTTTTTTCTCTCTTTCATTCTTTTCTTCC TTTTTCACTTGGAACTCGGAGTGGCGTGAAACAGCCATGTGATTCCTCTGCGAGTGAAGGTGGTAAAACCACTTGGAAGA CATGCACTTGATCGTCTTGCGTCACCAGAGATTTGGCAATGAAGTAAGCTGATCACGTAAGCATGAACGTACCAGAATTT TATTTGATTACCACAACCTTGCAATATAAATAGCCGTGCCATCCATCTTCAAATTAACCACATAGCTAGAAGCAGATACA TTTTACAATGGCCACCACCACCATCACCACCGCCACAAAGTCACCCCTCTTAACCGACTTGGCCTCCACCCTGAACCATG TCCCCTCCAATTTCATCAGGCCCATCAATGACCGTCCAAATGTTCATGAATTTCAATCCTTCTCCGATTCCATTCCTATC ATTGACCTCCAAGGTCTAGATGGTTCCAATCGCGAAGAAATCATCCAAAAGATTGCCAACGCTTGCCAAAATTATGGCTT TTTCCAAGTATAAATCAAATCAAAATTATGACTTTTTGCATGCAATATAATTATGTTGTTACACACAAATTTCAAATTGG CCTTTAATATATCTATATCTATGATTTTTCACATGGAATCATGAGTATTTTTTTTCTTTTTTTAAGATTGTGCATCATGG AGTGCCGGAGGAGGTGGTAGGTAACATGGTGAAGGTGTCAAGAGAATTCTTCAGTTTGCCAGAGAGTGAGAGGCTGAAGA ATTACTCTGATGACATGTCAAAGACAACCAGGCTTTCCACCAGTTTCAACTTGAAGACTGAGAAGGTTTCCAACTGGAGG GACTACTTGAGACTTCACTGCCATCCTCTTCAGGATTACATTCACGAGTGGCCTGCCAACCCTCCATCTTTCAGGTTAAA AACATACACAATTAATCATTTATTTTGTTGTATGTATCTTTCTTTGGAAACAATCATGTTCGATTCGGAAACTATGATAA TATGTGGGTGAGCTCTCGAGTTTTGAAAACAGGACTGGATTAGCCAGTTCAACCAAAAATTAGCTAACCGAGAATAAATT CTAGAACTGGTCAAAACATATTAAGACTCGGTCGAACGGATCCAGAATCAGGCTTAACCAACCATTTTTCTATTTGTAAT GTTTTGCTTTCCTTTTATTTTTAAAACAATATTTTAACGACTTATTAATTTTTTCATCATATAAAATATATTTGATGAGC AACTTATAATAATTTAATATTTAATATTTCGCATGAACGTATTATATATCATGTAAATAATATTAAAATATTATTTAATT GCTACATATTGAATCTATAATTTGATTATATGGTTTCACTATTAAATTTTGAACCAGTACTTTTAACCGATTCAACAACT GGTCCGATTTTTTTAAAAGATAGACAATTACTTTGTTTAATTGACAAATTTAAACTTCCATCGTGTTTACTTTCCCTCAA CAATAAATTTTGAATTTTCTTATGATGATGATCTTCAGAGAGGATGTTGCTGAGTATTGCAAACATGTGAGAGGGTTGTC ACTGAAATTGGTTGAGGCCATATCTGAGAGCCTGGGGTTGGAGAGGAATTACATAGACAAAGCACTAGGAAAACATGGGC AGCACATGGCCATTAACTACTACCCTCCATGTCCTGAGCCAGGGCTGACATATGGCCTACCAGCTCATACTGACCCAAAT GTCATTACCATTTTGCTGCAAAATGATGTGGCAGGCTTGCAGGTCCTGAAAGATGAGAAATGGGTAACTGTCAATCCTGT TCCTAACACATTCATCGTCAATATTGGGGACCAAATTCAGGTAATTCACTCATGCTCGTTTTTGTGTCGCTTTGCCACTT CTGCAATTTTTTAGAACAAATGCAATGCAAGACATGTAGACGCATAAAGAAAGGCCTCTTTCTATATTAAAGATTGTTCA AAACTTTTTGAATGTAATTAATGACTCTCATATATAGTCAACAATAACGAATGATATTCTATATGAATTAAATTAAAGCT TTTTTTAACCTTAATTAAGGTGAATTTTGTGGTACCCATATATTTTTTCGGGTATGGTACCTCGTATAGTACTTTAAGTT ATAATTTTGTTATTTTCTTAAAAAAAAAATGGATGATTTATTGTTGCAATTTTTTTAAGAATTTAAGTTCGATTACTCAA TCAACTAATTACATATTGTATTTAAGTTTGTTTATATTGTTCAATGCACGATTTGAAAAACTAGGATTTTAAGTTTAACT TTCGATTTTGAGATATCATCTAAGATCCTGTCTTGTCAGATCTTCTTTCTCCATGTCTCACCTATGTTAAACCTTGCAAA TCTTCATCCATTATTTTTTTTTAAGTTCAAATTGTATTATTTTTCTATTAATTTATATCATTCTGGGTATCACGCCTTAA TCTGGCTTAAGGTACCACAGCAAGCACCTTAAATTAAAGCTAAGAAGGCACAATTCTTTTTTGAATGTAGTTAATGACTC TTATAGTCAGCTAATGAAACATTGTTCTATCAAATCAAGATTAGAAGCCAAGACACACTTCTTTTTTTAGTATAACTGGT GACTCTTATTATAGGCAGCAATAATTAAACATTAAACATTATTCCATCAAATTAAGATTAGAAGGCACAATTCTTACCTA AGGGTAATTATTATGACTTAAGGTATTGATAGGGTGAGAATAGGTTAAGCAAGCCGAACTACTTCGCGAGTTTTTTTTAT AGGCACTTCGTGTGTTAATAATATAATAGACGTATGATTTTTCTTTTCTTCTTTTTTATAGACGTATAATATACTTAAAA GTTTTAAGTTCTAAGTCTGACATGATAGTTATCATTTTTTTTAAGTCAATGCTGTCCTTTTGTTTTTTAAGTCAATGCTG TCATGTTATTAGTTAAACTTAAATTGAGCCATTTGTTCAATAATGCATGTCTTAGAGTATCTCCAATGCATAGTTGCTAG TTGTGTTGCTTAAAAACTATTTCGGTGGGTCCAGACTGATACATAGGATTTAAGCAACCCAAGCAGAATTCGCTCAAACC ACGGTTGCTTAGTTTACTTTTAGTTGGGTCTCATTATACCTCTTATATTTATATTATTTTAAGGTAATGACATTATACAA GTGCATGAATGAAAGAGAAAATATGATTTTTTAGTCAAAAAGTAAGGAGAGAAAAAATAAGCAACCGTTGCTTAAATTTA AGCAACCCAGCTGTCAACGTCATGTTGCTCCAGTGGTGCTCCAAAATAAACAACGTTGCTTAAGTTGCCAACTGGATTTA AGTAACTCCATTAGAGATGCTCTTATGAATAATGCTGTTCATGAATAAGATGGAATATTATTAATTAATATGCATGTTGT GTGTGGGTTTGGCAAAGGTGATAAGCAATGATAAGTACAAGAGTGCCCTTCATCGAGCATTGGTGAACAATGAAAAGGAG AGGATGTCCATTCCCACCTTCTACTGTCCTTCACCGGACGCTTTGATAGGACCAGCTCCCCAACTAATAGACATCGACCA TCCTGCTCAATACACAAACTATGCTTACAGTGAATATTACCACAACTTCTGGAACAGAGGACTTTCAAAAACAACTTGCG TGGACATGTTCAAGGCTTCAAACTAGCTCATCATTTTGGCATTGATGCGCGCGGCCATGATTTCTAAGCTTTGTCAAAGG TTCTATGAACTTTTTGGTATTTATATTGTAACTTGTAAGATCGAATAGTTTGTGATGTTACATAATTTGTTAAATAAAAA TCAGTCTGATGACTTCTTGTTATATTATTTCTC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0404700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCACCACCACCATCACCACCGCCACAAAGTCACCCCTCTTAACCGACTTGGCCTCCACCCTGAACCATGTCCCCTC CAATTTCATCAGGCCCATCAATGACCGTCCAAATGTTCATGAATTTCAATCCTTCTCCGATTCCATTCCTATCATTGACC TCCAAGGTCTAGATGGTTCCAATCGCGAAGAAATCATCCAAAAGATTGCCAACGCTTGCCAAAATTATGGCTTTTTCCAA ATTGTGCATCATGGAGTGCCGGAGGAGGTGGTAGGTAACATGGTGAAGGTGTCAAGAGAATTCTTCAGTTTGCCAGAGAG TGAGAGGCTGAAGAATTACTCTGATGACATGTCAAAGACAACCAGGCTTTCCACCAGTTTCAACTTGAAGACTGAGAAGG TTTCCAACTGGAGGGACTACTTGAGACTTCACTGCCATCCTCTTCAGGATTACATTCACGAGTGGCCTGCCAACCCTCCA TCTTTCAGAGAGGATGTTGCTGAGTATTGCAAACATGTGAGAGGGTTGTCACTGAAATTGGTTGAGGCCATATCTGAGAG CCTGGGGTTGGAGAGGAATTACATAGACAAAGCACTAGGAAAACATGGGCAGCACATGGCCATTAACTACTACCCTCCAT GTCCTGAGCCAGGGCTGACATATGGCCTACCAGCTCATACTGACCCAAATGTCATTACCATTTTGCTGCAAAATGATGTG GCAGGCTTGCAGGTCCTGAAAGATGAGAAATGGGTAACTGTCAATCCTGTTCCTAACACATTCATCGTCAATATTGGGGA CCAAATTCAGGTGATAAGCAATGATAAGTACAAGAGTGCCCTTCATCGAGCATTGGTGAACAATGAAAAGGAGAGGATGT CCATTCCCACCTTCTACTGTCCTTCACCGGACGCTTTGATAGGACCAGCTCCCCAACTAATAGACATCGACCATCCTGCT CAATACACAAACTATGCTTACAGTGAATATTACCACAACTTCTGGAACAGAGGACTTTCAAAAACAACTTGCGTGGACAT GTTCAAGGCTTCAAACTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0404700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATTTITTATKSPLLTDLASTLNHVPSNFIRPINDRPNVHEFQSFSDSIPIIDLQGLDGSNREEIIQKIANACQNYGFFQ IVHHGVPEEVVGNMVKVSREFFSLPESERLKNYSDDMSKTTRLSTSFNLKTEKVSNWRDYLRLHCHPLQDYIHEWPANPP SFREDVAEYCKHVRGLSLKLVEAISESLGLERNYIDKALGKHGQHMAINYYPPCPEPGLTYGLPAHTDPNVITILLQNDV AGLQVLKDEKWVTVNPVPNTFIVNIGDQIQVISNDKYKSALHRALVNNEKERMSIPTFYCPSPDALIGPAPQLIDIDHPA QYTNYAYSEYYHNFWNRGLSKTTCVDMFKASN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.60.120.330
16 338 323 6.6E-112
IPR027443
PANTHER
PTHR10209
18 336 319 2.3E-122 –
PANTHER
PTHR10209:SF698
18 336 319 2.3E-122 –
SUPERFAMILY
SSF51197
19 338 320 2.75E-108 –
Pfam
PF14226
49 157 109 4.3E-27
IPR026992
ProSiteProfiles
PS51471
201 301 101 15.608
IPR005123
Pfam
PF03171
204 301 98 7.9E-32
IPR005123

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0404700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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