Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0405300 |
Transcript ID | LotjaGi3g1v0405300.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | B3 domain-containing protein; TAIR: AT2G46870.1 AP2/B3-like transcriptional factor family protein; Swiss-Prot: sp|O82799|NGA1_ARATH B3 domain-containing transcription factor NGA1; TrEMBL-Plants: tr|A0A0S3T055|A0A0S3T055_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0405300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80856958..80869641) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTTTTAATCTTCTTAATAAGAAGAATAAAACTAGCTTGCAACAAACATTTTTGCTTCTTTTTTCCTACTTGTAAAGA ACCTTCCTTGTGAGGTAACTAGCTATTTTTGTTAGCTAAAACTCACATCATTCTTCTTCCCCTACTTCATCTCTCTCTCT CTCTCTCTAACTCCACATATTATGTTATGTTTAGGTCAACAATAACCCCAACTTGACCCCATTTTTGATTCCTCCATAAA CTTGTCTTTAGGGTTTTATGCCTCCTGAGTCAAATTTGAAGGCACCGACTCTTGCAATTGTCTTGTACTAACTAAGAACC AGCTGCTAGCTTTTCTTACTTTTCCTTAATTCACAGCCTCACAAATCTCCACCCTCAAATATCTTCCTCTCAAAAAATAT TTTTGTTGGTATATATATAATCTTTCTTGGAATTTTTAAATTTTTATTATTTGATTCCTTTGCTTATATATTTATTTATT TCCCTCCTCCCTAACTTCCTTCTTCCTCTTTTTTCCATCATGTTTTTTTTTTTTTATATTCTTTCTGGGGGGTGACATTA TTTATTGTTTAATTTTCTGAGATCCAGAGGTTATAATTAGCAGAGAATTCCAAGGTGGGTGGGTCAGTCTATAATTTCAT GGAACTGATCCAAGAAGAAGCAGTGAAAGGTTATTCTGATAGCAGAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGAAG AAGAAGAAGCAGGTGAAGAAGGAATCATCACAACAACAAGAGAAGAAGAAGAAGAAGAAGAAGAAAGCAGCAGTAAGCAC CACTGCCCCTTTTCTTCACCCTCTAATTTCTCTTTATCTTCTTCTTCTCCCTCAATCACAGATTACAACAACACTCATCA TCTTCATCATCACAATCATCATGTAATGAACATTCCTAGCCAAAATTCATGGCTTGGAATGACTCATGATGATCCTCATC ACTCTCCAGAGGCCAACACAGCCACTGAATCTCACAATTCATCATCTGGGTTAGGGTTCTTGTTACACCAAGATGGAGCA TCAGCATCAGCACCAACAACATCCAATTTCACCACCAATCACACAACAAAACAGCTAGATTTCATGGAATTATCACTTGG AAACAACCAAAATCTCTCTGATGAACCCAATTTTCAACAACAACAACAACAAGGATCACTATCTGCTTCAGCTCCTCCTC CTCTTTATGGCCATGCAAGTGGTGGTGCTAGTTCTTCAGCAAACCAGCAACAACAACCCATTGAGAAAGAGCACATGTTT GACAAAGTCGTGACGCCGAGCGATGTGGGGAAGCTGAACCGATTAGTGATACCAAAACAGCACGCTGAGAAGTACTTCCC TCTCGATTCCGCCTCGAATGAGAAGGGGCTACTTCTCAATTTCGAGGACCGGAATGGGAAGCTCTGGCGGTTCCGGTACT CGTACTGGAACAGCAGCCAGAGCTATGTGATGACAAAAGGATGGAGCCGGTTTGTGAAGGAGAAGAAGCTTGATGCCGGC GACATTGTCTCGTTCCAGCGCGGTGTCGGGGACTTATGCCGGCACAGGTTGTACATAGATTGGAGGAGAAGGCCTGATCA TCATCTCCCTGATCCTTCATCAGCAGCACTCTTCACACCTTTCTTTCTTCCTCCCAATCATCATCACCAACCACACTTGT CACAGTACTCAATCAGGTGGGGTGGTGCTAATAGCAGATTCTATTCCCCACCACAGCCGCCGCGCCACCACCTCCACCAT GACCCTCTGCAGCAGCAGCAGCTCAATTACAACCACCACATGTATCAACATCATCATCATCCATTTCACCCCTACCATGA GCTGAACTCAGGATCTGGGTCAATCTATTACCTGAGATCAGCACCATCAATGTCAATAGCTGATCATCAAACCTTAGCAA GACAACAACAACAACATCAAGAAGGAGGAGGAATCAGCAGCAATATTGCCCCCATGATAATTGATTCTGTTCCAGTTGGG CATCATCACCACCACCACCACCACCAACACGGCGGTAGCGCTGGCATTAGTAGTAGTACTAGTAGTAGTAACACTGCAGC AAAAAGGTTAAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCTTCATCTTCATCTTTACCTTCTCCTTCTCTACCAC AGAATTTGAGGGTGCCTCATGAAGACAGTACAATTTCACAATCATCAGCAAGGTTTGGGATTGGGGATCTCCAGAGAGGG GAGGCTTCAGTGCTTTTTGATTTGGACCCATCTTTGCAGTATCGGCAGTGATGAAAACAAAGTTGAAGAAACAAAATAAT GATGGAGAAGAAGAAGAAGAAGAAGATGATGCCAGTTCTGAAGTTTACTGGGATAGCTAGCTACACACTCTCTTTTGCAG CATTATTATTATTACTACTATTTTTTATTATTTTTTTGTTTTGTTTTTTTCTCCCCTTTCTTCATGCTACAAAGGAAAGT GCTTTCAAACTTTCTTCTTCTGATGATAAGAAGTGATAATTAGAGTTTGAACTTTTATCTCAATGAATTAATTGGGTCCT GAAGATATATTGGAACATCCTTCCAGAAATGGGAAATGAAAATCTTGGAATTCAATTACATTTAGACCTTTTCTTCAATT GTGTATAATAGAATTACAACACATTTATATATATATTAATTTATCAGAGTATAAATGTTTGTTTGTTCCTTTCATATATT TTATTAGTATTACTTGAATATAAATATATATGTAGACTGTGCTCTCTCACTTTCCGTTTACTGCATTTAATGATACACAG AAAAGCTTGTTGCTTTCTATTTTTTCCTGTAATGTTTCTGTTAGCCTTGTTGGGTTGATGTCGATCACAACTCTCTGCTG GTTCTGCTTCTCCTGCTGTTGCTGCTTAGTTAGGCATTTTAGCTTTGCAGATAAAGCTCAGAAAGTTGCACAGGCTGTAA AAGGGTAAATTTTTCTTTTCTTATCTCACTTTCCTAAACCATTTATTGATTGATGGGTTTTGATTTGATTTTTATACCTA CACCTCACTTCTCTCTATCTCCATCATCATCATCATCAGATTCTCACTCTCTCTCTCTCTCTCTTTTTCTTCCTTTCTCA CTTGCTCATGTTTGGACTTTGGATGTATGTAATTATATATTCATTGTTTATTGATGATTATCAATGAATAGTTAACACCA GCCTCTCCCCTTCACAAACACTCACTCACACTCTCTCACTCTCCCCAATCCCCATTACTTACTTTTTTTCTTCTGGTGAC ATGCTTTCTTGACTTCTCCTATTCTGCAGCCGCCATCTTGTCTGGATTAGCACTGTGCTCAAACGTGTCTTGGGTAAGTA GAATAATGGCTTTTCCCCCATTTTCTCATGCTTGCTTACTGGCTTAATGGCTTTTCCCTAATTTTAAAAGATGCAGTTTA TGTAGCTTTAAAACTTTAAATATTTGCTTTATGGATTTAGATTCCTTATGTGATTCTTAGCAATTCATAGCACATGTTTG GAAACTTGTTTCAAAATAACGGTGAAGTCAAAATTATGATGACAATAGTAAAAGCTAAGAGAAGTCACTTCTGTTGTCAC CATTATTTTGACTTCTGTGTGTTTCTTACAAACGAGATTCTAAATAAACACTTGATTATTCTTTATCACATGCTTCTTAT TGTTGAAAGTTGAAAACTCACTGCATATTTGCATATACTTTAGGAGTTGTCAGGCATTGCAATAATGACGACCGACTGTG ACTTTTGGACATTGATTAATCAAGGAGCTTTACTTTGGTAATCAAGGTGAATAATTAACTATCAGCTTAATGTTTAGTGA TATATATTGATTTGCTCTTTTCTGTGATACTTAATTACTAGTAAATAGCTGATATGAAATGTGGGATTTATATTGTATGA AGAAAGTGAAACTTCTCATACAAAAAACTGTCATTTTAATTCATCCAAGATATACATTGTTGTTAAATGACATATTGTTT CCTTCAAAGTTCAAAGTATCATCATCTACATTAGAATGGGATGGTAAGAGAATTGTCTTCCTATAATGGCACAATACACT TTGGTTAATGTAGTGCTGATATATACCATATCTCATTTTAATTATTCAGATATATGCTGTTCATGTTTAATTGGTTGAAA GATTGATAGAAATCACCCAGGTTTAAATGTTAGGGTCATCTGCTACAAAATACACTGTTGATAGCATAAAAAGGAGATAA TCAAACAGAATGTTACATTCTCACAGTGTAAAATGGGGAAACCAAAAGCTACAATTATATAGGACACTAAGATGAATAGT AAGGGAGACAAGACAAACATAGGAGCAGGACTTTTCTTTAAACACACAGACTTAAATGCGATGCATTTCTGTTAAAATAA TATGAGTGATTCAGATCCTTGGGTGAAATTAATTTCTATGAGCTCACCTCTAAATTCTTGGGAGAATCCTTATGACTGCG GGAAATTAATGTAGAATGAAAGAGACAGGAAATAGAACTTTTTCATTTGGGGGTATTTGTGTTGGGGGTTGGGAGGATCA ACAAGTTTAAGATGCCTTGGAGCCCAACAAGGCAGGAGAAGATAGCTAGGACAATAGAAGATTCAAAATCAATTGTTTGC TCTTTGACTTTTGTTGCATCATATTCTCTTATTCCCCTTGCTATCTGATCTTGCATATCCAAGTTTAGAAAATCAAATGA TAATCAAGAGGAAAGTTAGGCATGTTTAGATACAATGTGAAAACCACAATGTAGTTAAAATCACCCTAAAAGTTAAGACC AATTATTTTTATTTACCATGTTTTTCTACTGTGTATCCAAACATGCATTAAATACATGTTTGAAATTGCTTGAATAATTG ATTCTGCACCCAAATTAAGTTGGAAGAGAAGCTCATGTTTGAATGTTAGAAAAAGAAGTAAATGCAAGATGATATATGTA AGTTGAAAATCGTACCATGTCAATACATAGACGGTTTTATAGCATGGTTTTTTCCTTTAAAAGTAATTATAGCACTTAGA AGAAACTACCAAAATCTTCTAAAAAAATTAATTTTGGCTTTATAATCCATCGTAGAAGAAGAATTTTTAAATATGTACTT TATTTTTTATTTTAGTCATACTTCATTTGATTTTAGGGCAATATATTTTTTATGTGCTATGAGAAACTCTTTTATGAGAT TTTTCTCCATTAGTCTTGGTTTTATACTTCACACATAAATGCAAGAAATATTATGTGTGTGTGGCGTTAATCACAATTTA ATACCATTCCTAGACTAGAGTATTAGGCTTCATGCTTGTCATAAACAATTGGCTTGTAGGAGTATATTCATGATTCTTCG CAACATGAAGGTTGTCAATGTTTTGGGATCATCCCAAGAAACAGTGTACGAAACGCAATTCCTGTCAGTTATACGGTTGT ATTGATTTTAATGGTTATTAATTCTGTTCAATTTCCGTGTGTGCTCATTAATTAATAGTTGCTACTTATGGGTGTTTTGT GCAGAAGGGAAAAAAATAGAAGAACCACAGAACCTATGATGTGAAGATCTGAAGGTTGCCGTCTCCGTAAGATTTAACTG AGGTACTACAATTAATCGTTGGCATTTTTAACCATTGTTTTATCACATTCGATAATTTCACGGTCAGCGCACTAAACTCT AGGGTATGCCAACTTCTTAATTTTTACCTTGCATTTAGGTTTTTTTTTAATCGGCCAAATTTTGCCTAAGATATTGATTT CTAGACTTTTCCTTCTCTAATCTTTTATGTTTCTAGCTCACTCTCATATATCTCCAACTTTAACCACTTGAATCATTAGT TACTAATATTTTTGGAAAGAAATTCACTTACTAATATTTGAGTCAAGATATTAGGAGCTCATTTGATTGATGTTTTAGTT TTCTTTTTAAAAAAAATTAGTTTTAGATTTTAAAATCTATTTTTCAAAAGGAAACAGAAAAAATTGTTTGATTGAAATGT TTTACAATATAGAAATATAGAATTTGAAGACTGAAAACAAAATAGAAAACACATCTGAGATGTTTTTAAAAATTAGTTTT AGATTTTAAAACAGTTTTTATAAACAAATAATCACAAATAAGATTTTAAAAACATAACAACGTTTTCAAACACGTACTGG AGATAATCAAAGGGTAGCTGTAGGTGATTCTTGCACTCATCAAATCAATTGCCATTTATTTTTCATATTTGTGTGCACTT AAATAAGTCTTCAATTTAATTGTAAAAGATATGCAGAAAGAAAAATCACTCTCAAGTTGCCAATCCACAGAAAATGGGCA CACACATATGATTCACTGTTAAAAAGGTGGATGTAGACAATAATTGTTTTTAAGTGCCTGGTTGATCTAATTCAGTAGTA TATTTTCACTGGGTTGTGGGGGTGTATATGGTACACTGCCACCACTCGTAACTATTTGGTAACTATATTATTGTTTAAAA CTTTTTATTGTTACAAAATTTATGACAATTTTATGTTTACAAATTATAAGTGGCCTAGTGTACACAACCCCTATTTTCAT TGTGAAATGTTGACAGGTAAGAGTATCATGTTTGCAAGTACGTGCCGTCGTCAAATTAAACTCACCTCTAATATTATAAA ATCAATATATAATTCCCCCCATGAATAACTGATAGTTATAACAATGCATGAACCATAAGAAAATGTCACAATACATTAAG TTTGGAAATCAGGAAAAGCCTCTATAGATTATAGAAACATAAATCATGTATTGTTTTAATTAGTTTCTGAACTTCTAACG CCATAAACATATCAATTTAATTTGGAGTATAAAAATTGTTTTTTTATATGGATCATGATAAGGCTTTTGTTTCTATTTTG TTTGTTTGAATTTACCCGCAAATTAATTAATTGTAACACATAAAACATATTGTGAATATCATGCACTAAATGTTGCATTT TATTACAAGTGAAAATACGACTCATCTGATCGGTTTTTAATATGGTCACCATATAATTTGCGTATTTTTACACACAAAAC ACACCACAATATGTGTTATTCAATTTATATGTACTATCTAAATTTAAATTTATGAATTTATAGGGCTCTGTCTAGTGTGG ATTTAAGAAAAACATTCACAAGTTAAAAAATGTCACTCTATAAATTAATTTCAATAGATAAAAAGCATATTGTAAATAAT ACTAAATTTTAGTCTTATTGTGGTTCGTGTACAATTTATAATCATGTAGATTTTAACACTAATAGTAGAATTTTTTTTGT TAACTAAGTTCACTTAAAGGAACATTATGTGTGTGGTCCATCCATTGTAATTCTATCGCTTAATACACGTGATAACTTTA TGGTTCTTAATTGACTTAATTACTTCTTTTATTCCTCTATATCCGTCAATATCTTGAGAAATTTTTGATATTATTTATAG GTCACTTTTTTTTATTTTCAAGTAATAATTTTATTTTACCAATTATACCTTTAATTTAAAATAATTCTAAATTGTAACAA AGAAATAAGAGTCAAAACTAGTAAATGAGATAAAAGGTATATTAGGAAGTTAGAAGTTATTTAAGAAAAAAATAGGAACA TTAAAACTATTTCTTAATCCTTGTGAAAAAACCATAAAGTGAGAGGATTGTTCTCAACATTATTATTATTTTAATAGTTT TTTTTTTGTTTAAAAATACTATGGTGCTTAATAACTTGTTTCTTCGTCGCTTTTCGGTCCCCGGTAGATGTCCCTTCTTA TTGGTCTTTTATTGCTTGATCCGGGATTGAGTCCTCTTGTTAATGTAACCTAGGGTTTGTCTTGCAATCTATGCAACGAA GGTAGTTCTTAGGTGCTGTTCTTTTATAGTTTTATCTTTGGATGCACCTAAAAAATTGGTTTCCGAGACTTTTGCCCTAT GAATCATCGGGTAGCAGTTTAGCTTGTCCTAAATTGCTTTTTTTTTATGTTTTCCTAGGGTGTATTGGCGGGTTTTTGCC CACTTTATTGAGTACTATTTGTATTATCGACCGCTTTTTAATAAAGGTTTCTGCTTTCTAGAAAAATAATTGAACGAACA AATTAATTGAAAATAAAAATATATCATAAGGATAGACAACCATTTCTCAAACGGGTCACGACATCCGTCAAAGATAAAAA AAAATCCATGAGAATTTTTCACATTCCCAAATGAAAAACTCAAATTTTGTATATAGAAAATGGTTGATTAGGAAGATTGA TTTATTTTAATTTAGTAGTATAATATATGCTTCATCAGATCCTATTTATAATTTCTTTAAAACTAACTTGCAAAATTCAG AAAATTAGTTAAGATTAATGATTAGTCTCAAGATTATCAAAAATATATTAATTTTTCCAAACTATCCCTTATTGGAAAAC TAAAAGAATAATTGATAAGTGCTGAATAATTCAATATGAAGCATTAAATATTAGTAAGAGTAACTTGAAATTTTGTTTAA TGCTTTGTTATATATACAAATGGGCACAAAAAACTTCAAAAAAATTGACTTATAAATAGAAACAAATGGAGTGCGTGTTT ATGGGTGGAGGAGGAGAAGGGGTGACCAAAGAGTAGGACATAAATAAGTTTCAATTTTAAGAATTATGATATAGTTAGGG CATATTTTGACCTACTACAATAGCCTATTTCTGTAGTTTTGAGAGACCAAATTTATTGCTTGTTCACCGCTCCTTGAGGT AAATGTGTTTCTAACATCAAACATGGTGTTGCTTCTTGTTTGCTCCTTGTTCTCACAGATGTCATTGCTCTTTCCCTTGT TGTGAGTCCACACTCACCATTGCGTTCATCCTTTTTTTTTTCTCAGCAAAAGAGATTGTATTAAATGGGATCACTAGGGG TGACCCAACCCAATACAACAAGAAAAGAGAAAAGAGAACAAACTATACAGGTTATGAAATTGCGTTCATCCTTTTTTTTT GAAAGGAGAAATATATATATATATATATATATATTAAATAGGAAATGTTGAGAAACAACCCCTCTCAACAACATGGGTAT AGTTACCTAGTCAACCAAAGAGTCGACAAAAGCCCCCCAACAAGGTACAAACTACCATGAAGAAGAATAAGACTTCCAAT TACCAAATATAAAGCATTAAAACCTTGGAAAAAAAACCCTTGGATCAAAATCCTGATAGTGGAACATCTAAAGCCCAAAA GACCTAAACCCTGCCACCCAAACCAAACAAACACCTAGAAGGGAGACTCCATCGGGGACGAAGAGGCAAAGAGGCGCAAC TCCAAATCAGAAGCAACAATGACAAGGAAGCAAACGGTTGAAAACCCCAAACGAACCAAAACCCCAACAATCCAGTATAA GCAACGACTCAAATCTGATCCGCCTCACCAAGCAGAAGCAAAAGAAGCAGAGATGATCGACTAAGACACTGACCCCCAAA ACGCACAAAGCAAAAAATTGCGTTCATCCTAAACGCTACAATTTACATAGTTGAGCTTTGTTTGGGTGGTCTCCCTCGAG TCGAGGTCTGTCATCGTCATCATGCGAGTCGAGGTCTGTCATCGTCATCATGCTCTTTTAATTTTAAAGTTGCCAACATG AATAACACATGCTGAAAAAATGTATGTGTTTGGTTGATATTTAGAAAATACTTTCTTTAAAAATATTTTCTAAAATATGA TCAAAATAGGGTTTATCTTTACAAGAAGTGTCATTTATATGGTGTTTTGGCCCTTCCATCTTTAAAGAAAAAAAATTAAA ACTTATTTACTCGGAAAAAAGTTGTGATAAAATTTTTATTTTAAAATACTTTTTTCTTGTCCGATTTTCCATTGCATTTA AACTGGCTTCGGATTTTGTGTTGTTTTGAATTAAATGTATTCGTTTTTTTATCAGCAATTAAATATATTCGTGAAACAAA TATTGGAGTATAATATAAGGAGTAAATATATATAGAAGGAGTATATAGATATTATTGGTAAGATAACCCTATATAGCGAG TAGTTGGGGACCTGAAATGGCTTTTGAATAAAGAGTACCTCCACCCTATAAAAGTAGACAGGGAATAGGGTAATTAATTT GAGAAAAGAAGAAGAATAGGGTAATTAAGAGGAATAGGATGTGAGGTTGCATTATTAATGTAGATTGTACTACCATAAAG TTATCAGCAGCAGAAGTTCTTCACCCTTTTTCTCATTATTTAACTGAAAATCCGATTATTGGACGCATGCAGTGTATATC AGTGATCAATCCAAATCATTATAATTGTACTAAAACCTCAATGGACCACTTCCATCGATTCCATGCCACTTTGTCATATA TATGTGTAAAAATAAACAACTTTGTTACCTTCACACACTCACTAACTAATGGGTAAAAAATATAAATGAAAGGAACATTC ATTGTTTAGTCCCACCATGATTCCATGAATGTGTTTAAAAATAATGAACTATTTTAAAATAAAAGGACAATTCCCATCTT TAAATCAAATGGCCGGAGTCAGATTTGTACGTCTAATATATTAGTTTTTTTAAAGTTAAAGATGTCAAAAGTAACTTAAC AGTACATTGACACTCTAATTTTTCTCTTCTATCATATATAAGTAATATTTTCTTATCATTTTTCACTTTGAATGTCTTTT GGATGATGTATGCATTATACCAAAATTTACAAATCATTTTTCTTAACTTAATCAGGGACATTAAAGTCACAAGTTTAGAG GCCGGCTGATTCTAGCTGCTAGTAAGCAGTATAGCTAGTAACTTTCAAAGCCCTAAAACACAATAATAGAAAGTACTTAT TCCAAAAGTAAATGTTTAAGGTCCTCCTGCAGCTTTATATGTTTTGAGCATATAATTTGATAGTTCTAATCTGAAAATTT AGTTTCATTTTATTCTATTCTATATATGCATATAAAGTGGACGGCGATATCAAAATAACTGTTAAATTGGTCGTGATCAA TATATAATCATTAAAAAATAAACTCAGACAAAAACGCCATGCACAGCTCATCCTGCAAAAACAAACCAAAATTAGAAAAA ACATTTTGTTTCTTGAAAGAGAAGAGCATTAACTTTGATGAAAAATATTTCATATATATGTGTGTAGTGGAGGACCAGAA AGAGAATGATCGAGGGTGAAGATCATGGGAGTGTCCACGACAGAAGTGAAGCCCAAAAGTGACAGATCCTTTTTATATAA GTTTTCGTCGCTGGGGCTGTCCATGTTTCCCAAGATGATAAGTTAACAGATCAGATGCATGCCCATTGATTTCGTTTAAG GACCATGCAGCTAAAAAAGGAGTGAGAGGACCAGAGAGAGAAGAAAACCAATGAACCACACATAGCCAAGTTCCCGGTTT TATTAGTTTATTCGACTAGATCGGGTGTGATAAAAGTCAAAGATATCCGTACGTGTCTTCTAAAATATAAACAATCACTT TTAGCCACTGCGATCCGCATAAGTTCCTAGTTAGATAGATATTAATTATGTAAAGAAATTTACACAGATTTTATTCATAA TCAGTATGTGGTTTTGTAAATTATGCAGCATAAAGGTTTTCCCTCTTGTCATGTTTTCTAAAAATCTAAGCAACAAGGTT TCTAGTTACGAGAAGGTTTGTCAAGTTAGGTTAGAGTTTAATTTCTTTGTTGCTCAACATTTATATGGACTTATTCAATC ATATTTTTTTTTTTTTGTGAATGTAAGACTTTTGAACAAGTATCTACACACATAGGTATAGCTAGCTAGCTACTGCTTGC ATATACACATGCGATTGTTGTGATCAGTTTTGTTTGTTTTGGTTTAATTGCAACACATTTGAAAGGAACAAGAGAATGTA ATGTGTACGAAGCTTCTTTAGTGGCACCCATGTTGTTACTTTGGGATGTGGCCTGGTCTCAGAGGCTATATATATAGCTA AGGTCCTCGAATAATGTACATGTAGCGCGCGTGTGCGTGTGTGTAAGTGTAATGTTGTCGTGGTGGTTTTGGCATTAGTG AGTGAGTACTGTAGAACAGGTGCATGTGGAAATTGGATCTCTCTCGTAAATGGCGATTGATTGCAGTTAGGTAAATAGAG TACTAATGCCAGTAATGCGATCGATCCATCGAGCTGGAAAAGACAGAGTAATGTTAATTGATGGAAAGAAATGTGTGCAC AGTACGGCAGAGAGAACAAAAGTTTGTTTGGAACCACCCTCCATCCATCTAGCTAATACTACTTACAATTTTTCCTGGGC AGAAACTCTGATCAGAAGGGTTCCCTTGGGATCGTAGTTGGAAGTTCTTTTCATGGATTGGTTGCTTTTCTTTAATCATG TCCCGCCAGATATCCTGCAACTATTAATAACCACGTGAATAGTCACTTGTTTTTTACAACCAGAATTCAGAATTCGTCAA GATTCTTGATTCATAGAAACCCTTAATTTTATACTTTTTCATTTGTTTGGTGAATTCTATGGTACCGTAATTTTTATTTT AGGTGATACTCACATTAGGTGGTTCAGCAAATTAATGATATGTGTAGTAATTGAAATTATAGTTCTTGTTATAATTCTGA TGCAATAGTGTTCTCATTCACTAAGCAACTCAGCTATCCTCCGGCGAACTATGCTGGCGTCCATCGCGACCTTGAAGCGG TTGCTGCGAATCTCAATCATATCCTAGCATTGAGCCTAAGCGAC
CDS sequence (LotjaGi3g1v0405300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTGATCCAAGAAGAAGCAGTGAAAGGTTATTCTGATAGCAGAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGA AGAAGAAGAAGCAGGTGAAGAAGGAATCATCACAACAACAAGAGAAGAAGAAGAAGAAGAAGAAGAAAGCAGCAGTAAGC ACCACTGCCCCTTTTCTTCACCCTCTAATTTCTCTTTATCTTCTTCTTCTCCCTCAATCACAGATTACAACAACACTCAT CATCTTCATCATCACAATCATCATGTAATGAACATTCCTAGCCAAAATTCATGGCTTGGAATGACTCATGATGATCCTCA TCACTCTCCAGAGGCCAACACAGCCACTGAATCTCACAATTCATCATCTGGGTTAGGGTTCTTGTTACACCAAGATGGAG CATCAGCATCAGCACCAACAACATCCAATTTCACCACCAATCACACAACAAAACAGCTAGATTTCATGGAATTATCACTT GGAAACAACCAAAATCTCTCTGATGAACCCAATTTTCAACAACAACAACAACAAGGATCACTATCTGCTTCAGCTCCTCC TCCTCTTTATGGCCATGCAAGTGGTGGTGCTAGTTCTTCAGCAAACCAGCAACAACAACCCATTGAGAAAGAGCACATGT TTGACAAAGTCGTGACGCCGAGCGATGTGGGGAAGCTGAACCGATTAGTGATACCAAAACAGCACGCTGAGAAGTACTTC CCTCTCGATTCCGCCTCGAATGAGAAGGGGCTACTTCTCAATTTCGAGGACCGGAATGGGAAGCTCTGGCGGTTCCGGTA CTCGTACTGGAACAGCAGCCAGAGCTATGTGATGACAAAAGGATGGAGCCGGTTTGTGAAGGAGAAGAAGCTTGATGCCG GCGACATTGTCTCGTTCCAGCGCGGTGTCGGGGACTTATGCCGGCACAGGTTGTACATAGATTGGAGGAGAAGGCCTGAT CATCATCTCCCTGATCCTTCATCAGCAGCACTCTTCACACCTTTCTTTCTTCCTCCCAATCATCATCACCAACCACACTT GTCACAGTACTCAATCAGGTGGGGTGGTGCTAATAGCAGATTCTATTCCCCACCACAGCCGCCGCGCCACCACCTCCACC ATGACCCTCTGCAGCAGCAGCAGCTCAATTACAACCACCACATGTATCAACATCATCATCATCCATTTCACCCCTACCAT GAGCTGAACTCAGGATCTGGGTCAATCTATTACCTGAGATCAGCACCATCAATGTCAATAGCTGATCATCAAACCTTAGC AAGACAACAACAACAACATCAAGAAGGAGGAGGAATCAGCAGCAATATTGCCCCCATGATAATTGATTCTGTTCCAGTTG GGCATCATCACCACCACCACCACCACCAACACGGCGGTAGCGCTGGCATTAGTAGTAGTACTAGTAGTAGTAACACTGCA GCAAAAAGGTTAAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCTTCATCTTCATCTTTACCTTCTCCTTCTCTACC ACAGAATTTGAGGGTGCCTCATGAAGACAGTACAATTTCACAATCATCAGCAAGGTTTGGGATTGGGGATCTCCAGAGAG GGGAGGCTTCAGTGCTTTTTGATTTGGACCCATCTTTGCAGTATCGGCAGTGA
Protein sequence (LotjaGi3g1v0405300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELIQEEAVKGYSDSREEEEEEEEEEEEEEAGEEGIITTTREEEEEEEESSSKHHCPFSSPSNFSLSSSSPSITDYNNTH HLHHHNHHVMNIPSQNSWLGMTHDDPHHSPEANTATESHNSSSGLGFLLHQDGASASAPTTSNFTTNHTTKQLDFMELSL GNNQNLSDEPNFQQQQQQGSLSASAPPPLYGHASGGASSSANQQQQPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYF PLDSASNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLCRHRLYIDWRRRPD HHLPDPSSAALFTPFFLPPNHHHQPHLSQYSIRWGGANSRFYSPPQPPRHHLHHDPLQQQQLNYNHHMYQHHHHPFHPYH ELNSGSGSIYYLRSAPSMSIADHQTLARQQQQHQEGGGISSNIAPMIIDSVPVGHHHHHHHHQHGGSAGISSSTSSSNTA AKRLRLFGVNMECASSSSSSLPSPSLPQNLRVPHEDSTISQSSARFGIGDLQRGEASVLFDLDPSLQYRQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 80 | 80 | - | – | |
Coils | 9 | 36 | 28 | - | – | |
MobiDBLite | 16 | 46 | 31 | - | – | |
MobiDBLite | 55 | 77 | 23 | - | – | |
MobiDBLite | 94 | 146 | 53 | - | – | |
MobiDBLite | 113 | 146 | 34 | - | – | |
MobiDBLite | 161 | 184 | 24 | - | – | |
MobiDBLite | 161 | 207 | 47 | - | – | |
PANTHER | 169 | 503 | 335 | 2.1E-93 | – | |
PANTHER | 169 | 503 | 335 | 2.1E-93 | – | |
Gene3D | 202 | 328 | 127 | 1.0E-46 | ||
SUPERFAMILY | 211 | 318 | 108 | 2.22E-29 | ||
CDD | 212 | 301 | 90 | 2.79191E-26 | ||
SMART | 214 | 319 | 106 | 2.6E-22 | ||
Pfam | 214 | 318 | 105 | 7.9E-29 | ||
ProSiteProfiles | 214 | 319 | 106 | 14.029 | ||
MobiDBLite | 423 | 442 | 20 | - | – | |
MobiDBLite | 423 | 439 | 17 | - | – | |
MobiDBLite | 454 | 477 | 24 | - | – | |
MobiDBLite | 496 | 525 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0405300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…